RNA–Protein interactions for RNA: ENST00000462051.5

NR1H3-216, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-216ENST00000462051 RGPD2P0DJD1 1756 aa27.96■■■□□ 2.07
NR1H3-216ENST00000462051 UTRNP46939 3433 aa27.95■■■□□ 2.07
NR1H3-216ENST00000462051 QSER1Q2KHR3 1735 aa27.95■■■□□ 2.06
NR1H3-216ENST00000462051 POLD1P28340 1107 aa27.94■■■□□ 2.06
NR1H3-216ENST00000462051 GPR162Q16538 588 aa27.94■■■□□ 2.06
NR1H3-216ENST00000462051 NBPF6Q5VWK0 638 aa27.92■■■□□ 2.06
NR1H3-216ENST00000462051 NBPF4Q96M43 638 aa27.92■■■□□ 2.06
NR1H3-216ENST00000462051 NSD2O96028 1365 aa27.91■■■□□ 2.06
NR1H3-216ENST00000462051 KLHL34Q8N239 644 aa27.91■■■□□ 2.06
NR1H3-216ENST00000462051 COL24A1Q17RW2 1714 aa27.91■■■□□ 2.06
NR1H3-216ENST00000462051 FYB1O15117 783 aa27.9■■■□□ 2.06
NR1H3-216ENST00000462051 RRS1Q15050 365 aaKnown RBP27.9■■■□□ 2.06
NR1H3-216ENST00000462051 LY75O60449 1722 aa27.89■■■□□ 2.06
NR1H3-216ENST00000462051 DOT1LQ8TEK3 1739 aa27.89■■■□□ 2.06
NR1H3-216ENST00000462051 MEGF6O75095 1541 aa27.89■■■□□ 2.06
NR1H3-216ENST00000462051 SHANK3Q9BYB0 1731 aa27.89■■■□□ 2.05
NR1H3-216ENST00000462051 CCNL1Q9UK58 526 aaPredicted RBP27.88■■■□□ 2.05
NR1H3-216ENST00000462051 TUBGCP6Q96RT7 1819 aa27.88■■■□□ 2.05
NR1H3-216ENST00000462051 GGNBP2Q9H3C7 697 aa27.87■■■□□ 2.05
NR1H3-216ENST00000462051 CGNL1Q0VF96 1302 aa27.86■■■□□ 2.05
NR1H3-216ENST00000462051 RTL1A6NKG5 1358 aa27.86■■■□□ 2.05
NR1H3-216ENST00000462051 USHBP1Q8N6Y0 703 aa27.85■■■□□ 2.05
NR1H3-216ENST00000462051 RAPGEF4Q8WZA2 1011 aa27.84■■■□□ 2.05
NR1H3-216ENST00000462051 C1QTNF8P60827 252 aa27.83■■■□□ 2.05
NR1H3-216ENST00000462051 COL23A1Q86Y22 540 aaPredicted RBP27.83■■■□□ 2.05
NR1H3-216ENST00000462051 PELP1Q8IZL8 1130 aaKnown RBP27.83■■■□□ 2.05
NR1H3-216ENST00000462051 NLGN2Q8NFZ4 835 aa27.83■■■□□ 2.05
NR1H3-216ENST00000462051 USP47Q96K76 1375 aa27.83■■■□□ 2.05
NR1H3-216ENST00000462051 MSH5O43196 834 aa27.82■■■□□ 2.04
NR1H3-216ENST00000462051 TMF1P82094 1093 aa27.82■■■□□ 2.04
NR1H3-216ENST00000462051 HSP90AB2PQ58FF8 381 aa27.81■■■□□ 2.04
NR1H3-216ENST00000462051 TATP17735 454 aaPredicted RBP27.8■■■□□ 2.04
NR1H3-216ENST00000462051 SMG6Q86US8 1419 aaKnown RBP27.77■■■□□ 2.04
NR1H3-216ENST00000462051 INSRP06213 1382 aa27.76■■■□□ 2.03
NR1H3-216ENST00000462051 SENP3-EIF4A1A0A087X0R7 540 aa27.76■■■□□ 2.03
NR1H3-216ENST00000462051 PCDH11XQ9BZA7 1347 aa27.73■■■□□ 2.03
NR1H3-216ENST00000462051 PCDH11YQ9BZA8 1340 aa27.73■■■□□ 2.03
NR1H3-216ENST00000462051 YBX3P16989 372 aaKnown RBP eCLIP27.73■■■□□ 2.03
NR1H3-216ENST00000462051 HMGB2P26583 209 aaKnown RBP27.73■■■□□ 2.03
NR1H3-216ENST00000462051 MSL1Q68DK7 614 aa27.73■■■□□ 2.03
NR1H3-216ENST00000462051 MPRIPQ6WCQ1 1025 aa27.73■■■□□ 2.03
NR1H3-216ENST00000462051 CYP27B1O15528 508 aa27.72■■■□□ 2.03
NR1H3-216ENST00000462051 GRIN3BO60391 1043 aa27.72■■■□□ 2.03
NR1H3-216ENST00000462051 FLT4P35916 1363 aa27.72■■■□□ 2.03
NR1H3-216ENST00000462051 CDCA8Q53HL2 280 aa27.71■■■□□ 2.03
NR1H3-216ENST00000462051 KIF24Q5T7B8 1368 aa27.71■■■□□ 2.03
NR1H3-216ENST00000462051 GOLGB1Q14789 3259 aaKnown RBP27.7■■■□□ 2.03
NR1H3-216ENST00000462051 FLAD1Q8NFF5 587 aa27.7■■■□□ 2.02
NR1H3-216ENST00000462051 CARD14Q9BXL6 1004 aa27.7■■■□□ 2.02
NR1H3-216ENST00000462051 PALLDQ8WX93 1383 aa27.69■■■□□ 2.02
NR1H3-216ENST00000462051 C5P01031 1676 aa27.68■■■□□ 2.02
NR1H3-216ENST00000462051 GIGYF1O75420 1035 aaPredicted RBP27.68■■■□□ 2.02
NR1H3-216ENST00000462051 TAF1LQ8IZX4 1826 aa27.68■■■□□ 2.02
NR1H3-216ENST00000462051 KIF20BQ96Q89 1820 aa27.68■■■□□ 2.02
NR1H3-216ENST00000462051 CD2APQ9Y5K6 639 aa27.67■■■□□ 2.02
NR1H3-216ENST00000462051 EMILIN1Q9Y6C2 1016 aa27.67■■■□□ 2.02
NR1H3-216ENST00000462051 SMARCC1Q92922 1105 aaPredicted RBP27.66■■■□□ 2.02
NR1H3-216ENST00000462051 ITGB4P16144 1822 aa27.65■■■□□ 2.02
NR1H3-216ENST00000462051 NKX1-1Q15270 411 aaPredicted RBP27.64■■■□□ 2.02
NR1H3-216ENST00000462051 PIGBQ92521 554 aa27.64■■■□□ 2.02
NR1H3-216ENST00000462051 PPM1GO15355 546 aaPredicted RBP27.62■■■□□ 2.01
NR1H3-216ENST00000462051 AMIGO3Q86WK7 504 aa27.61■■■□□ 2.01
NR1H3-216ENST00000462051 AK7Q96M32 723 aa27.61■■■□□ 2.01
NR1H3-216ENST00000462051 SPG7Q9UQ90 795 aa27.61■■■□□ 2.01
NR1H3-216ENST00000462051 TOGARAM1Q9Y4F4 1720 aa27.6■■■□□ 2.01
NR1H3-216ENST00000462051 C4BP0C0L5 1744 aa27.59■■■□□ 2.01
NR1H3-216ENST00000462051 SMIM5Q71RC9 77 aa27.59■■■□□ 2.01
NR1H3-216ENST00000462051 NSD3Q9BZ95 1437 aa27.58■■■□□ 2.01
NR1H3-216ENST00000462051 PKD1L3Q7Z443 1732 aa27.58■■■□□ 2.01
NR1H3-216ENST00000462051 WASHC2AQ641Q2 1341 aa27.58■■■□□ 2.01
NR1H3-216ENST00000462051 NCAPD2Q15021 1401 aa27.58■■■□□ 2
NR1H3-216ENST00000462051 EYA1Q99502 592 aa27.57■■■□□ 2
NR1H3-216ENST00000462051 MAP2P11137 1827 aaKnown RBP27.56■■■□□ 2
NR1H3-216ENST00000462051 PHF14O94880 888 aa27.56■■■□□ 2
NR1H3-216ENST00000462051 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.56■■■□□ 2
NR1H3-216ENST00000462051 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.55■■■□□ 2
NR1H3-216ENST00000462051 LOC102724428A0A0B4J2F2 783 aa27.55■■■□□ 2
NR1H3-216ENST00000462051 SIK1P57059 783 aa27.55■■■□□ 2
NR1H3-216ENST00000462051 UBR3Q6ZT12 1888 aa27.55■■■□□ 2
NR1H3-216ENST00000462051 LINC00116Q8NCU8 138 aa27.53■■■□□ 2
NR1H3-216ENST00000462051 ASAP1Q9ULH1 1129 aa27.53■■■□□ 2
NR1H3-216ENST00000462051 SSFA2P28290 1259 aa27.52■■■□□ 2
NR1H3-216ENST00000462051 TMOD3Q9NYL9 352 aa27.52■■■□□ 2
NR1H3-216ENST00000462051 POLKQ9UBT6 870 aa27.52■■■□□ 2
NR1H3-216ENST00000462051 IFNL2Q8IZJ0 200 aa27.51■■□□□ 1.99
NR1H3-216ENST00000462051 ATP10DQ9P241 1426 aa27.5■■□□□ 1.99
NR1H3-216ENST00000462051 ANKRD26Q9UPS8 1709 aa27.5■■□□□ 1.99
NR1H3-216ENST00000462051 PHKG2P15735 406 aa27.49■■□□□ 1.99
NR1H3-216ENST00000462051 TRIM26Q12899 539 aaPredicted RBP27.49■■□□□ 1.99
NR1H3-216ENST00000462051 ITPK1Q13572 414 aa27.49■■□□□ 1.99
NR1H3-216ENST00000462051 IGSF1Q8N6C5 1336 aa27.48■■□□□ 1.99
NR1H3-216ENST00000462051 ATP6V1AP38606 617 aa27.48■■□□□ 1.99
NR1H3-216ENST00000462051 GPBP1L1Q9HC44 474 aaPredicted RBP27.47■■□□□ 1.99
NR1H3-216ENST00000462051 ATG3Q9NT62 314 aa27.47■■□□□ 1.99
NR1H3-216ENST00000462051 WWC3Q9ULE0 1092 aa27.46■■□□□ 1.99
NR1H3-216ENST00000462051 GNPATO15228 680 aa27.45■■□□□ 1.98
NR1H3-216ENST00000462051 TIMELESSQ9UNS1 1208 aa27.45■■□□□ 1.98
NR1H3-216ENST00000462051 EIF4A2Q14240 407 aaKnown RBP27.44■■□□□ 1.98
NR1H3-216ENST00000462051 TNNT2P45379 298 aaPredicted RBP27.43■■□□□ 1.98
NR1H3-216ENST00000462051 ADCY9O60503 1353 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms