RNA–Protein interactions for RNA: ENST00000461871.1

GTF3C5-208, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 623 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-208ENST00000461871 WDR17Q8IZU2 1322 aa18.24■□□□□ 0.51
GTF3C5-208ENST00000461871 AKAP4Q5JQC9 854 aa18.24■□□□□ 0.51
GTF3C5-208ENST00000461871 RAPGEF4Q8WZA2 1011 aa18.24■□□□□ 0.51
GTF3C5-208ENST00000461871 SOS1Q07889 1333 aaPredicted RBP18.23■□□□□ 0.51
GTF3C5-208ENST00000461871 MAP3K5Q99683 1374 aa18.23■□□□□ 0.51
GTF3C5-208ENST00000461871 BRPF1P55201 1214 aaPredicted RBP18.23■□□□□ 0.51
GTF3C5-208ENST00000461871 NLRP2Q9NX02 1062 aa18.23■□□□□ 0.51
GTF3C5-208ENST00000461871 ABCA3Q99758 1704 aa18.23■□□□□ 0.51
GTF3C5-208ENST00000461871 SRCAPQ6ZRS2 3230 aa18.22■□□□□ 0.51
GTF3C5-208ENST00000461871 CSB-PGBD3P0DP91 1061 aa18.22■□□□□ 0.51
GTF3C5-208ENST00000461871 TATP17735 454 aaPredicted RBP18.22■□□□□ 0.51
GTF3C5-208ENST00000461871 ALDH1L2Q3SY69 923 aa18.22■□□□□ 0.51
GTF3C5-208ENST00000461871 CARD10Q9BWT7 1032 aa18.22■□□□□ 0.51
GTF3C5-208ENST00000461871 CHMP4AQ9BY43 222 aa18.22■□□□□ 0.51
GTF3C5-208ENST00000461871 SPG7Q9UQ90 795 aa18.22■□□□□ 0.51
GTF3C5-208ENST00000461871 OVOS2A0A0G2JMS6 1433 aa18.22■□□□□ 0.51
GTF3C5-208ENST00000461871 RGPD5Q99666 1765 aa18.22■□□□□ 0.51
GTF3C5-208ENST00000461871 COL16A1Q07092 1604 aaPredicted RBP18.21■□□□□ 0.51
GTF3C5-208ENST00000461871 MS4A1P11836 297 aa18.21■□□□□ 0.51
GTF3C5-208ENST00000461871 RARSP54136 660 aaKnown RBP18.21■□□□□ 0.51
GTF3C5-208ENST00000461871 CHRNA2Q15822 529 aa18.21■□□□□ 0.51
GTF3C5-208ENST00000461871 RGS17Q9UGC6 210 aaPredicted RBP18.21■□□□□ 0.51
GTF3C5-208ENST00000461871 CRB1P82279 1406 aa18.21■□□□□ 0.51
GTF3C5-208ENST00000461871 PHLPP1O60346 1717 aa18.2■□□□□ 0.5
GTF3C5-208ENST00000461871 FAM83GA6ND36 823 aa18.2■□□□□ 0.5
GTF3C5-208ENST00000461871 EXOSC9Q06265 439 aaKnown RBP18.2■□□□□ 0.5
GTF3C5-208ENST00000461871 PDE3AQ14432 1141 aa18.2■□□□□ 0.5
GTF3C5-208ENST00000461871 CEMIPQ8WUJ3 1361 aa18.19■□□□□ 0.5
GTF3C5-208ENST00000461871 TAF7Q15545 349 aaPredicted RBP18.19■□□□□ 0.5
GTF3C5-208ENST00000461871 C1orf141Q5JVX7 400 aa18.19■□□□□ 0.5
GTF3C5-208ENST00000461871 USHBP1Q8N6Y0 703 aa18.19■□□□□ 0.5
GTF3C5-208ENST00000461871 PPP4R2Q9NY27 417 aa18.19■□□□□ 0.5
GTF3C5-208ENST00000461871 COL5A2P05997 1499 aaPredicted RBP18.19■□□□□ 0.5
GTF3C5-208ENST00000461871 RGPD2P0DJD1 1756 aa18.18■□□□□ 0.5
GTF3C5-208ENST00000461871 COL14A1Q05707 1796 aaKnown RBP18.18■□□□□ 0.5
GTF3C5-208ENST00000461871 PLEKHG5O94827 1062 aa18.18■□□□□ 0.5
GTF3C5-208ENST00000461871 HSP90AB1P08238 724 aaKnown RBP18.18■□□□□ 0.5
GTF3C5-208ENST00000461871 EVA1CP58658 441 aa18.18■□□□□ 0.5
GTF3C5-208ENST00000461871 AAMPQ13685 434 aa18.18■□□□□ 0.5
GTF3C5-208ENST00000461871 MBIPQ9NS73 344 aa18.18■□□□□ 0.5
GTF3C5-208ENST00000461871 ZNF530Q6P9A1 599 aaPredicted RBP18.17■□□□□ 0.5
GTF3C5-208ENST00000461871 TSR2Q969E8 191 aaKnown RBP18.17■□□□□ 0.5
GTF3C5-208ENST00000461871 MCM10Q7L590 875 aa18.16■□□□□ 0.5
GTF3C5-208ENST00000461871 IL17REQ8NFR9 667 aa18.16■□□□□ 0.5
GTF3C5-208ENST00000461871 IPO8O15397 1037 aaKnown RBP18.15■□□□□ 0.5
GTF3C5-208ENST00000461871 VAMP4O75379 141 aa18.15■□□□□ 0.5
GTF3C5-208ENST00000461871 TOM1L2Q6ZVM7 507 aa18.15■□□□□ 0.5
GTF3C5-208ENST00000461871 THUMPD2Q9BTF0 503 aaKnown RBP18.15■□□□□ 0.5
GTF3C5-208ENST00000461871 JCADQ9P266 1359 aa18.15■□□□□ 0.5
GTF3C5-208ENST00000461871 DCTN1Q14203 1278 aa18.14■□□□□ 0.49
GTF3C5-208ENST00000461871 IFNL2Q8IZJ0 200 aa18.14■□□□□ 0.49
GTF3C5-208ENST00000461871 LAS1LQ9Y4W2 734 aaKnown RBP18.14■□□□□ 0.49
GTF3C5-208ENST00000461871 LRRC37A3O60309 1634 aa18.13■□□□□ 0.49
GTF3C5-208ENST00000461871 ARHGAP45Q92619 1136 aa18.13■□□□□ 0.49
GTF3C5-208ENST00000461871 CDCA7Q9BWT1 371 aaPredicted RBP18.13■□□□□ 0.49
GTF3C5-208ENST00000461871 RNMTO43148 476 aaKnown RBP18.12■□□□□ 0.49
GTF3C5-208ENST00000461871 SPATA31A6Q5VVP1 1343 aa18.12■□□□□ 0.49
GTF3C5-208ENST00000461871 KIF16BQ96L93 1317 aa18.12■□□□□ 0.49
GTF3C5-208ENST00000461871 BCAR3O75815 825 aa18.11■□□□□ 0.49
GTF3C5-208ENST00000461871 HOXB7P09629 217 aa18.11■□□□□ 0.49
GTF3C5-208ENST00000461871 IL2RBP14784 551 aa18.11■□□□□ 0.49
GTF3C5-208ENST00000461871 TEFQ10587 303 aa18.11■□□□□ 0.49
GTF3C5-208ENST00000461871 TWISTNBQ3B726 338 aaPredicted RBP18.11■□□□□ 0.49
GTF3C5-208ENST00000461871 DCAF5Q96JK2 942 aa18.11■□□□□ 0.49
GTF3C5-208ENST00000461871 BTG4Q9NY30 223 aa18.11■□□□□ 0.49
GTF3C5-208ENST00000461871 TSPYL4Q9UJ04 414 aa18.11■□□□□ 0.49
GTF3C5-208ENST00000461871 THRAP3Q9Y2W1 955 aaKnown RBP18.11■□□□□ 0.49
GTF3C5-208ENST00000461871 ADAMTS7Q9UKP4 1686 aa18.1■□□□□ 0.49
GTF3C5-208ENST00000461871 ZCRB1Q8TBF4 217 aaKnown RBP18.1■□□□□ 0.49
GTF3C5-208ENST00000461871 PKD1L3Q7Z443 1732 aa18.09■□□□□ 0.49
GTF3C5-208ENST00000461871 PHKG2P15735 406 aa18.09■□□□□ 0.49
GTF3C5-208ENST00000461871 NKX1-1Q15270 411 aaPredicted RBP18.09■□□□□ 0.49
GTF3C5-208ENST00000461871 ZKSCAN2Q63HK3 967 aa18.09■□□□□ 0.49
GTF3C5-208ENST00000461871 SSH1Q8WYL5 1049 aa18.09■□□□□ 0.49
GTF3C5-208ENST00000461871 PCDH11XQ9BZA7 1347 aa18.08■□□□□ 0.49
GTF3C5-208ENST00000461871 PCDH11YQ9BZA8 1340 aa18.08■□□□□ 0.49
GTF3C5-208ENST00000461871 LARP1Q6PKG0 1096 aaKnown RBP18.08■□□□□ 0.48
GTF3C5-208ENST00000461871 C8orf58Q8NAV2 365 aa18.08■□□□□ 0.48
GTF3C5-208ENST00000461871 SMC4Q9NTJ3 1288 aa18.08■□□□□ 0.48
GTF3C5-208ENST00000461871 PARP4Q9UKK3 1724 aaKnown RBP18.08■□□□□ 0.48
GTF3C5-208ENST00000461871 MEGF6O75095 1541 aa18.08■□□□□ 0.48
GTF3C5-208ENST00000461871 CHMP4BQ9H444 224 aaKnown RBP18.06■□□□□ 0.48
GTF3C5-208ENST00000461871 LGR6Q9HBX8 967 aa18.06■□□□□ 0.48
GTF3C5-208ENST00000461871 STRN4Q9NRL3 753 aa18.06■□□□□ 0.48
GTF3C5-208ENST00000461871 NWD2Q9ULI1 1742 aa18.06■□□□□ 0.48
GTF3C5-208ENST00000461871 ERVV-2B6SEH9 535 aa18.05■□□□□ 0.48
GTF3C5-208ENST00000461871 PLIN1O60240 522 aa18.05■□□□□ 0.48
GTF3C5-208ENST00000461871 CANXP27824 592 aaKnown RBP18.05■□□□□ 0.48
GTF3C5-208ENST00000461871 IRX6P78412 446 aaPredicted RBP18.05■□□□□ 0.48
GTF3C5-208ENST00000461871 PELP1Q8IZL8 1130 aaKnown RBP18.05■□□□□ 0.48
GTF3C5-208ENST00000461871 POTEAQ6S8J7 498 aa18.04■□□□□ 0.48
GTF3C5-208ENST00000461871 ATF7IPQ6VMQ6 1270 aa18.04■□□□□ 0.48
GTF3C5-208ENST00000461871 MPRIPQ6WCQ1 1025 aa18.04■□□□□ 0.48
GTF3C5-208ENST00000461871 MRPL50Q8N5N7 158 aaKnown RBP18.04■□□□□ 0.48
GTF3C5-208ENST00000461871 TSPYL6Q8N831 410 aa18.04■□□□□ 0.48
GTF3C5-208ENST00000461871 SLIT2O94813 1529 aa18.03■□□□□ 0.48
GTF3C5-208ENST00000461871 BTBD11A6QL63 1104 aa18.03■□□□□ 0.48
GTF3C5-208ENST00000461871 CYP27B1O15528 508 aa18.03■□□□□ 0.48
GTF3C5-208ENST00000461871 CCDC30Q5VVM6 783 aa18.03■□□□□ 0.48
GTF3C5-208ENST00000461871 SLC52A2Q9HAB3 445 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms