RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-222ENST00000461849 TATP17735 454 aaPredicted RBP18.95■□□□□ 0.62
RBM39-222ENST00000461849 SYTL4Q96C24 671 aaPredicted RBP18.95■□□□□ 0.62
RBM39-222ENST00000461849 STK32BQ9NY57 414 aa18.95■□□□□ 0.62
RBM39-222ENST00000461849 PANK3Q9H999 370 aa18.94■□□□□ 0.62
RBM39-222ENST00000461849 SPON1Q9HCB6 807 aa18.93■□□□□ 0.62
RBM39-222ENST00000461849 ANO8Q9HCE9 1232 aaPredicted RBP18.93■□□□□ 0.62
RBM39-222ENST00000461849 MEGF6O75095 1541 aa18.93■□□□□ 0.62
RBM39-222ENST00000461849 PPP1R1BQ9UD71 204 aaPredicted RBP18.92■□□□□ 0.62
RBM39-222ENST00000461849 KIF7Q2M1P5 1343 aa18.92■□□□□ 0.62
RBM39-222ENST00000461849 TNNT2P45379 298 aaPredicted RBP18.91■□□□□ 0.62
RBM39-222ENST00000461849 BTAF1O14981 1849 aa18.9■□□□□ 0.62
RBM39-222ENST00000461849 SLC15A2Q16348 729 aa18.9■□□□□ 0.62
RBM39-222ENST00000461849 WASHC2AQ641Q2 1341 aa18.9■□□□□ 0.62
RBM39-222ENST00000461849 MAP2P11137 1827 aaKnown RBP18.89■□□□□ 0.61
RBM39-222ENST00000461849 ZNF316A6NFI3 1004 aaPredicted RBP18.89■□□□□ 0.61
RBM39-222ENST00000461849 PRIM1P49642 420 aaKnown RBP18.89■□□□□ 0.61
RBM39-222ENST00000461849 POLKQ9UBT6 870 aa18.88■□□□□ 0.61
RBM39-222ENST00000461849 PCDH11XQ9BZA7 1347 aa18.88■□□□□ 0.61
RBM39-222ENST00000461849 PCDH11YQ9BZA8 1340 aa18.88■□□□□ 0.61
RBM39-222ENST00000461849 KNSTRNQ9Y448 316 aa18.87■□□□□ 0.61
RBM39-222ENST00000461849 DOT1LQ8TEK3 1739 aa18.86■□□□□ 0.61
RBM39-222ENST00000461849 SHANK3Q9BYB0 1731 aa18.86■□□□□ 0.61
RBM39-222ENST00000461849 ANKRD26Q9UPS8 1709 aa18.86■□□□□ 0.61
RBM39-222ENST00000461849 NSD2O96028 1365 aa18.86■□□□□ 0.61
RBM39-222ENST00000461849 SLC27A3Q5K4L6 730 aa18.86■□□□□ 0.61
RBM39-222ENST00000461849 ZBTB7AO95365 584 aa18.84■□□□□ 0.61
RBM39-222ENST00000461849 MORC1Q86VD1 984 aa18.84■□□□□ 0.61
RBM39-222ENST00000461849 EYA1Q99502 592 aa18.83■□□□□ 0.6
RBM39-222ENST00000461849 PDGFDQ9GZP0 370 aaPredicted RBP18.83■□□□□ 0.6
RBM39-222ENST00000461849 SPG7Q9UQ90 795 aa18.83■□□□□ 0.6
RBM39-222ENST00000461849 LRRC4BQ9NT99 713 aa18.82■□□□□ 0.6
RBM39-222ENST00000461849 CASZ1Q86V15 1759 aa18.82■□□□□ 0.6
RBM39-222ENST00000461849 EIF4A2Q14240 407 aaKnown RBP18.81■□□□□ 0.6
RBM39-222ENST00000461849 ATF5Q9Y2D1 282 aaPredicted RBP18.81■□□□□ 0.6
RBM39-222ENST00000461849 MPRIPQ6WCQ1 1025 aa18.8■□□□□ 0.6
RBM39-222ENST00000461849 MTFR1LQ9H019 292 aa18.8■□□□□ 0.6
RBM39-222ENST00000461849 CCNL1Q9UK58 526 aaPredicted RBP18.8■□□□□ 0.6
RBM39-222ENST00000461849 PAPPAQ13219 1627 aa18.79■□□□□ 0.6
RBM39-222ENST00000461849 DCAF8L1A6NGE4 600 aa18.79■□□□□ 0.6
RBM39-222ENST00000461849 CYP27B1O15528 508 aa18.79■□□□□ 0.6
RBM39-222ENST00000461849 ZNF827Q17R98 1081 aa18.79■□□□□ 0.6
RBM39-222ENST00000461849 NCAPD2Q15021 1401 aa18.79■□□□□ 0.6
RBM39-222ENST00000461849 HMGB2P26583 209 aaKnown RBP18.78■□□□□ 0.6
RBM39-222ENST00000461849 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.78■□□□□ 0.6
RBM39-222ENST00000461849 TFCP2L1Q9NZI6 479 aa18.78■□□□□ 0.6
RBM39-222ENST00000461849 KCNQ4P56696 695 aa18.77■□□□□ 0.6
RBM39-222ENST00000461849 PKD1L3Q7Z443 1732 aa18.77■□□□□ 0.59
RBM39-222ENST00000461849 IFNL2Q8IZJ0 200 aa18.76■□□□□ 0.59
RBM39-222ENST00000461849 AKT1S1Q96B36 256 aa18.76■□□□□ 0.59
RBM39-222ENST00000461849 LY75O60449 1722 aa18.76■□□□□ 0.59
RBM39-222ENST00000461849 PTGER2P43116 358 aa18.74■□□□□ 0.59
RBM39-222ENST00000461849 NKX1-1Q15270 411 aaPredicted RBP18.74■□□□□ 0.59
RBM39-222ENST00000461849 SMARCC1Q92922 1105 aaPredicted RBP18.74■□□□□ 0.59
RBM39-222ENST00000461849 IGSF1Q8N6C5 1336 aa18.74■□□□□ 0.59
RBM39-222ENST00000461849 PALLDQ8WX93 1383 aa18.73■□□□□ 0.59
RBM39-222ENST00000461849 AMER1Q5JTC6 1135 aaPredicted RBP18.73■□□□□ 0.59
RBM39-222ENST00000461849 SLC16A10Q8TF71 515 aa18.73■□□□□ 0.59
RBM39-222ENST00000461849 PLEKHG2Q9H7P9 1386 aa18.72■□□□□ 0.59
RBM39-222ENST00000461849 PHKG2P15735 406 aa18.72■□□□□ 0.59
RBM39-222ENST00000461849 TMOD3Q9NYL9 352 aa18.72■□□□□ 0.59
RBM39-222ENST00000461849 MSH5O43196 834 aa18.71■□□□□ 0.59
RBM39-222ENST00000461849 PLEKHO1Q53GL0 409 aaPredicted RBP18.71■□□□□ 0.59
RBM39-222ENST00000461849 PNPLA7Q6ZV29 1317 aa18.71■□□□□ 0.59
RBM39-222ENST00000461849 POLD1P28340 1107 aa18.7■□□□□ 0.58
RBM39-222ENST00000461849 CC2D1BQ5T0F9 858 aaKnown RBP18.7■□□□□ 0.58
RBM39-222ENST00000461849 PIGBQ92521 554 aa18.7■□□□□ 0.58
RBM39-222ENST00000461849 ITGB4P16144 1822 aa18.7■□□□□ 0.58
RBM39-222ENST00000461849 QSER1Q2KHR3 1735 aa18.69■□□□□ 0.58
RBM39-222ENST00000461849 TOGARAM1Q9Y4F4 1720 aa18.69■□□□□ 0.58
RBM39-222ENST00000461849 HSP90AB1P08238 724 aaKnown RBP18.69■□□□□ 0.58
RBM39-222ENST00000461849 AMOTQ4VCS5 1084 aa18.69■□□□□ 0.58
RBM39-222ENST00000461849 ARXQ96QS3 562 aa18.69■□□□□ 0.58
RBM39-222ENST00000461849 PER1O15534 1290 aaPredicted RBP18.68■□□□□ 0.58
RBM39-222ENST00000461849 DDX10Q13206 875 aaKnown RBP18.68■□□□□ 0.58
RBM39-222ENST00000461849 SGIP1Q9BQI5 828 aa18.68■□□□□ 0.58
RBM39-222ENST00000461849 FHDC1Q9C0D6 1143 aaPredicted RBP18.68■□□□□ 0.58
RBM39-222ENST00000461849 SULT6B1Q6IMI4 303 aa18.67■□□□□ 0.58
RBM39-222ENST00000461849 MTHFSP49914 203 aa18.66■□□□□ 0.58
RBM39-222ENST00000461849 CNGB1Q14028 1251 aaPredicted RBP18.66■□□□□ 0.58
RBM39-222ENST00000461849 C1orf141Q5JVX7 400 aa18.66■□□□□ 0.58
RBM39-222ENST00000461849 ZNF530Q6P9A1 599 aaPredicted RBP18.66■□□□□ 0.58
RBM39-222ENST00000461849 SYT17Q9BSW7 474 aa18.66■□□□□ 0.58
RBM39-222ENST00000461849 C5P01031 1676 aa18.66■□□□□ 0.58
RBM39-222ENST00000461849 NPC1L1Q9UHC9 1359 aa18.66■□□□□ 0.58
RBM39-222ENST00000461849 IL13P35225 146 aa18.65■□□□□ 0.58
RBM39-222ENST00000461849 AEBP1Q8IUX7 1158 aa18.65■□□□□ 0.58
RBM39-222ENST00000461849 KLHL34Q8N239 644 aa18.65■□□□□ 0.58
RBM39-222ENST00000461849 FLAD1Q8NFF5 587 aa18.65■□□□□ 0.58
RBM39-222ENST00000461849 DCAF5Q96JK2 942 aa18.65■□□□□ 0.58
RBM39-222ENST00000461849 AK7Q96M32 723 aa18.65■□□□□ 0.58
RBM39-222ENST00000461849 LOC102724428A0A0B4J2F2 783 aa18.64■□□□□ 0.57
RBM39-222ENST00000461849 ERVV-2B6SEH9 535 aa18.64■□□□□ 0.57
RBM39-222ENST00000461849 SIK1P57059 783 aa18.64■□□□□ 0.57
RBM39-222ENST00000461849 TUBGCP6Q96RT7 1819 aa18.64■□□□□ 0.57
RBM39-222ENST00000461849 COL23A1Q86Y22 540 aaPredicted RBP18.63■□□□□ 0.57
RBM39-222ENST00000461849 ASAP1Q9ULH1 1129 aa18.63■□□□□ 0.57
RBM39-222ENST00000461849 ATP6V1AP38606 617 aa18.62■□□□□ 0.57
RBM39-222ENST00000461849 CABP4P57796 275 aa18.62■□□□□ 0.57
RBM39-222ENST00000461849 TAF1LQ8IZX4 1826 aa18.61■□□□□ 0.57
RBM39-222ENST00000461849 KDRP35968 1356 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms