RNA–Protein interactions for RNA: ENST00000461841.7

CDH23-208, Transcript of cadherin related 23, human

TSL 5 BASIC

Gene CDH23, Length 2,000 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH23-208	ENST00000461841	SLAIN2	Q9P270	581 aa		32.64	■■■□□ 2.82
CDH23-208	ENST00000461841	AXIN2	Q9Y2T1	843 aa		32.64	■■■□□ 2.82
CDH23-208	ENST00000461841	TNS3	Q68CZ2	1445 aa		32.64	■■■□□ 2.81
CDH23-208	ENST00000461841	HTATSF1	O43719	755 aa	Known RBP	32.63	■■■□□ 2.81
CDH23-208	ENST00000461841	TRIM27	P14373	513 aa		32.63	■■■□□ 2.81
CDH23-208	ENST00000461841	BRPF1	P55201	1214 aa	Predicted RBP	32.63	■■■□□ 2.81
CDH23-208	ENST00000461841	DZIP1L	Q8IYY4	767 aa	Known RBP	32.63	■■■□□ 2.81
CDH23-208	ENST00000461841	ATF7IP	Q6VMQ6	1270 aa		32.63	■■■□□ 2.81
CDH23-208	ENST00000461841	LRRC59	Q96AG4	307 aa	Known RBP	32.63	■■■□□ 2.81
CDH23-208	ENST00000461841	KIF16B	Q96L93	1317 aa		32.63	■■■□□ 2.81
CDH23-208	ENST00000461841	MS4A1	P11836	297 aa		32.62	■■■□□ 2.81
CDH23-208	ENST00000461841	SPATA31A3	Q5VYP0	1347 aa		32.62	■■■□□ 2.81
CDH23-208	ENST00000461841	ZC3H6	P61129	1189 aa	Known RBP	32.61	■■■□□ 2.81
CDH23-208	ENST00000461841	GNAT3	A8MTJ3	354 aa		32.61	■■■□□ 2.81
CDH23-208	ENST00000461841	RGPD2	P0DJD1	1756 aa		32.6	■■■□□ 2.81
CDH23-208	ENST00000461841	FTSJ3	Q8IY81	847 aa	Known RBP	32.6	■■■□□ 2.81
CDH23-208	ENST00000461841	ANKRD24	Q8TF21	1146 aa		32.6	■■■□□ 2.81
CDH23-208	ENST00000461841	CENPQ	Q7L2Z9	268 aa	Predicted RBP	32.6	■■■□□ 2.81
CDH23-208	ENST00000461841	IPO8	O15397	1037 aa	Known RBP	32.59	■■■□□ 2.81
CDH23-208	ENST00000461841	AAMP	Q13685	434 aa		32.59	■■■□□ 2.81
CDH23-208	ENST00000461841	MVP	Q14764	893 aa	Known RBP	32.58	■■■□□ 2.81
CDH23-208	ENST00000461841	CABLES1	Q8TDN4	633 aa		32.57	■■■□□ 2.8
CDH23-208	ENST00000461841	MRPL50	Q8N5N7	158 aa	Known RBP	32.56	■■■□□ 2.8
CDH23-208	ENST00000461841	MAP3K5	Q99683	1374 aa		32.56	■■■□□ 2.8
CDH23-208	ENST00000461841	NCAPD2	Q15021	1401 aa		32.56	■■■□□ 2.8
CDH23-208	ENST00000461841	KIAA0232	Q92628	1395 aa		32.55	■■■□□ 2.8
CDH23-208	ENST00000461841	MIS18A	Q9NYP9	233 aa		32.55	■■■□□ 2.8
CDH23-208	ENST00000461841	RBM19	Q9Y4C8	960 aa	Known RBP	32.55	■■■□□ 2.8
CDH23-208	ENST00000461841	KRT24	Q2M2I5	525 aa		32.53	■■■□□ 2.8
CDH23-208	ENST00000461841	IL17RE	Q8NFR9	667 aa		32.53	■■■□□ 2.8
CDH23-208	ENST00000461841	RGPD5	Q99666	1765 aa		32.52	■■■□□ 2.8
CDH23-208	ENST00000461841	ERBB3	P21860	1342 aa		32.52	■■■□□ 2.8
CDH23-208	ENST00000461841	LRRC37A3	O60309	1634 aa		32.52	■■■□□ 2.8
CDH23-208	ENST00000461841	TCERG1	O14776	1098 aa	Known RBP	32.51	■■■□□ 2.79
CDH23-208	ENST00000461841	TSPYL4	Q9UJ04	414 aa		32.51	■■■□□ 2.79
CDH23-208	ENST00000461841	SOS2	Q07890	1332 aa	Predicted RBP	32.5	■■■□□ 2.79
CDH23-208	ENST00000461841	ARHGAP45	Q92619	1136 aa		32.5	■■■□□ 2.79
CDH23-208	ENST00000461841	IGHD	P01880	384 aa		32.49	■■■□□ 2.79
CDH23-208	ENST00000461841	CRYBG1	Q9Y4K1	1723 aa		32.49	■■■□□ 2.79
CDH23-208	ENST00000461841	CAMTA1	Q9Y6Y1	1673 aa		32.48	■■■□□ 2.79
CDH23-208	ENST00000461841	HAP1	P54257	671 aa	Predicted RBP	32.48	■■■□□ 2.79
CDH23-208	ENST00000461841	TMEM57	Q8N5G2	664 aa		32.47	■■■□□ 2.79
CDH23-208	ENST00000461841	PCDHB15	Q9Y5E8	787 aa		32.47	■■■□□ 2.79
CDH23-208	ENST00000461841	COL18A1	P39060	1754 aa		32.46	■■■□□ 2.79
CDH23-208	ENST00000461841	ITPRIP	Q8IWB1	547 aa		32.46	■■■□□ 2.79
CDH23-208	ENST00000461841	DDX19B	Q9UMR2	479 aa		32.46	■■■□□ 2.79
CDH23-208	ENST00000461841	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.46	■■■□□ 2.79
CDH23-208	ENST00000461841	AMOT	Q4VCS5	1084 aa		32.44	■■■□□ 2.78
CDH23-208	ENST00000461841	SKAP1	Q86WV1	359 aa		32.44	■■■□□ 2.78
CDH23-208	ENST00000461841	CPD	O75976	1380 aa		32.43	■■■□□ 2.78
CDH23-208	ENST00000461841	CEMIP	Q8WUJ3	1361 aa		32.43	■■■□□ 2.78
CDH23-208	ENST00000461841	TAF7	Q15545	349 aa	Predicted RBP	32.43	■■■□□ 2.78
CDH23-208	ENST00000461841	CHRNA2	Q15822	529 aa		32.42	■■■□□ 2.78
CDH23-208	ENST00000461841	LMO7	Q8WWI1	1683 aa		32.42	■■■□□ 2.78
CDH23-208	ENST00000461841	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.41	■■■□□ 2.78
CDH23-208	ENST00000461841	BABAM1	Q9NWV8	329 aa		32.41	■■■□□ 2.78
CDH23-208	ENST00000461841	AKAP4	Q5JQC9	854 aa		32.41	■■■□□ 2.78
CDH23-208	ENST00000461841	ABCC6	O95255	1503 aa		32.4	■■■□□ 2.78
CDH23-208	ENST00000461841	LGR6	Q9HBX8	967 aa		32.39	■■■□□ 2.78
CDH23-208	ENST00000461841	NLRP2	Q9NX02	1062 aa		32.38	■■■□□ 2.77
CDH23-208	ENST00000461841	ABCC4	O15439	1325 aa		32.37	■■■□□ 2.77
CDH23-208	ENST00000461841	ZBTB40	Q9NUA8	1239 aa		32.36	■■■□□ 2.77
CDH23-208	ENST00000461841	API5	Q9BZZ5	524 aa	Known RBP	32.36	■■■□□ 2.77
CDH23-208	ENST00000461841	CSB-PGBD3	P0DP91	1061 aa		32.33	■■■□□ 2.77
CDH23-208	ENST00000461841	C1orf141	Q5JVX7	400 aa		32.33	■■■□□ 2.77
CDH23-208	ENST00000461841	NHSL1	Q5SYE7	1610 aa		32.33	■■■□□ 2.77
CDH23-208	ENST00000461841	MPRIP	Q6WCQ1	1025 aa		32.33	■■■□□ 2.77
CDH23-208	ENST00000461841	RWDD1	Q9H446	243 aa	Predicted RBP	32.32	■■■□□ 2.76
CDH23-208	ENST00000461841	RAPGEF4	Q8WZA2	1011 aa		32.31	■■■□□ 2.76
CDH23-208	ENST00000461841	FAM208A	Q9UK61	1670 aa	Known RBP	32.31	■■■□□ 2.76
CDH23-208	ENST00000461841	SLC4A2	P04920	1241 aa		32.31	■■■□□ 2.76
CDH23-208	ENST00000461841	ZBTB7B	O15156	539 aa	Predicted RBP	32.3	■■■□□ 2.76
CDH23-208	ENST00000461841	RNMT	O43148	476 aa	Known RBP	32.29	■■■□□ 2.76
CDH23-208	ENST00000461841	PRDM11	Q9NQV5	511 aa		32.29	■■■□□ 2.76
CDH23-208	ENST00000461841	SOS1	Q07889	1333 aa	Predicted RBP	32.27	■■■□□ 2.76
CDH23-208	ENST00000461841	PTPRC	P08575	1304 aa		32.27	■■■□□ 2.76
CDH23-208	ENST00000461841	TEF	Q10587	303 aa		32.27	■■■□□ 2.76
CDH23-208	ENST00000461841	RGS12	O14924	1447 aa		32.26	■■■□□ 2.76
CDH23-208	ENST00000461841	OVOS2	A0A0G2JMS6	1433 aa		32.26	■■■□□ 2.75
CDH23-208	ENST00000461841	TAT	P17735	454 aa	Predicted RBP	32.26	■■■□□ 2.75
CDH23-208	ENST00000461841	HDAC1	Q13547	482 aa	Predicted RBP	32.25	■■■□□ 2.75
CDH23-208	ENST00000461841	CHMP4B	Q9H444	224 aa	Known RBP	32.25	■■■□□ 2.75
CDH23-208	ENST00000461841	MEGF6	O75095	1541 aa		32.24	■■■□□ 2.75
CDH23-208	ENST00000461841	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.24	■■■□□ 2.75
CDH23-208	ENST00000461841	ABCA3	Q99758	1704 aa		32.23	■■■□□ 2.75
CDH23-208	ENST00000461841	CCDC30	Q5VVM6	783 aa		32.22	■■■□□ 2.75
CDH23-208	ENST00000461841	RGS3	P49796	1198 aa		32.22	■■■□□ 2.75
CDH23-208	ENST00000461841	INTS3	Q68E01	1043 aa	Known RBP	32.22	■■■□□ 2.75
CDH23-208	ENST00000461841	VIRMA	Q69YN4	1812 aa	Known RBP	32.21	■■■□□ 2.75
CDH23-208	ENST00000461841	BTBD11	A6QL63	1104 aa		32.21	■■■□□ 2.75
CDH23-208	ENST00000461841	PDE4A	P27815	886 aa		32.21	■■■□□ 2.75
CDH23-208	ENST00000461841	EIF4A1	P60842	406 aa	Known RBP	32.21	■■■□□ 2.75
CDH23-208	ENST00000461841	G2E3	Q7L622	706 aa		32.21	■■■□□ 2.75
CDH23-208	ENST00000461841	STK31	Q9BXU1	1019 aa		32.21	■■■□□ 2.75
CDH23-208	ENST00000461841	KDM3B	Q7LBC6	1761 aa		32.21	■■■□□ 2.75
CDH23-208	ENST00000461841	SPG7	Q9UQ90	795 aa		32.21	■■■□□ 2.75
CDH23-208	ENST00000461841	LTBP4	Q8N2S1	1624 aa		32.21	■■■□□ 2.75
CDH23-208	ENST00000461841	PLEKHG2	Q9H7P9	1386 aa		32.2	■■■□□ 2.75
CDH23-208	ENST00000461841	WDR17	Q8IZU2	1322 aa		32.19	■■■□□ 2.74
CDH23-208	ENST00000461841	ADAMTS7	Q9UKP4	1686 aa		32.19	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms