RNA–Protein interactions for RNA: ENST00000461469.5

LMBR1-214, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-214ENST00000461469 SMG6Q86US8 1419 aaKnown RBP32.54■■■□□ 2.8
LMBR1-214ENST00000461469 DOT1LQ8TEK3 1739 aa32.54■■■□□ 2.8
LMBR1-214ENST00000461469 POLKQ9UBT6 870 aa32.53■■■□□ 2.8
LMBR1-214ENST00000461469 PPM1GO15355 546 aaPredicted RBP32.52■■■□□ 2.8
LMBR1-214ENST00000461469 KIF7Q2M1P5 1343 aa32.51■■■□□ 2.8
LMBR1-214ENST00000461469 TNNT2P45379 298 aaPredicted RBP32.5■■■□□ 2.79
LMBR1-214ENST00000461469 NBPF14Q5TI25 921 aa32.5■■■□□ 2.79
LMBR1-214ENST00000461469 TXNRD1Q16881 649 aa32.49■■■□□ 2.79
LMBR1-214ENST00000461469 ZCRB1Q8TBF4 217 aaKnown RBP32.49■■■□□ 2.79
LMBR1-214ENST00000461469 WASHC2AQ641Q2 1341 aa32.49■■■□□ 2.79
LMBR1-214ENST00000461469 NCAPD2Q15021 1401 aa32.48■■■□□ 2.79
LMBR1-214ENST00000461469 CASZ1Q86V15 1759 aa32.45■■■□□ 2.78
LMBR1-214ENST00000461469 NSD2O96028 1365 aa32.44■■■□□ 2.78
LMBR1-214ENST00000461469 PAPPAQ13219 1627 aa32.44■■■□□ 2.78
LMBR1-214ENST00000461469 PKD1L3Q7Z443 1732 aa32.43■■■□□ 2.78
LMBR1-214ENST00000461469 RAPGEF4Q8WZA2 1011 aa32.43■■■□□ 2.78
LMBR1-214ENST00000461469 PDGFDQ9GZP0 370 aaPredicted RBP32.42■■■□□ 2.78
LMBR1-214ENST00000461469 TATP17735 454 aaPredicted RBP32.41■■■□□ 2.78
LMBR1-214ENST00000461469 EYA1Q99502 592 aa32.41■■■□□ 2.78
LMBR1-214ENST00000461469 PRIM1P49642 420 aaKnown RBP32.4■■■□□ 2.78
LMBR1-214ENST00000461469 TOGARAM1Q9Y4F4 1720 aa32.38■■■□□ 2.77
LMBR1-214ENST00000461469 EIF4A2Q14240 407 aaKnown RBP32.38■■■□□ 2.77
LMBR1-214ENST00000461469 LRRC4BQ9NT99 713 aa32.37■■■□□ 2.77
LMBR1-214ENST00000461469 AMER1Q5JTC6 1135 aaPredicted RBP32.36■■■□□ 2.77
LMBR1-214ENST00000461469 SYTL4Q96C24 671 aaPredicted RBP32.36■■■□□ 2.77
LMBR1-214ENST00000461469 LY75O60449 1722 aa32.35■■■□□ 2.77
LMBR1-214ENST00000461469 CYP27B1O15528 508 aa32.35■■■□□ 2.77
LMBR1-214ENST00000461469 KNSTRNQ9Y448 316 aa32.34■■■□□ 2.77
LMBR1-214ENST00000461469 MORC1Q86VD1 984 aa32.33■■■□□ 2.77
LMBR1-214ENST00000461469 PCDH11XQ9BZA7 1347 aa32.32■■■□□ 2.76
LMBR1-214ENST00000461469 PCDH11YQ9BZA8 1340 aa32.32■■■□□ 2.76
LMBR1-214ENST00000461469 SLC15A2Q16348 729 aa32.32■■■□□ 2.76
LMBR1-214ENST00000461469 ITGB4P16144 1822 aa32.31■■■□□ 2.76
LMBR1-214ENST00000461469 PER1O15534 1290 aaPredicted RBP32.31■■■□□ 2.76
LMBR1-214ENST00000461469 KCNQ4P56696 695 aa32.31■■■□□ 2.76
LMBR1-214ENST00000461469 STK32BQ9NY57 414 aa32.3■■■□□ 2.76
LMBR1-214ENST00000461469 ZNF827Q17R98 1081 aa32.29■■■□□ 2.76
LMBR1-214ENST00000461469 IGSF1Q8N6C5 1336 aa32.26■■■□□ 2.76
LMBR1-214ENST00000461469 TUBGCP6Q96RT7 1819 aa32.26■■■□□ 2.76
LMBR1-214ENST00000461469 SPON1Q9HCB6 807 aa32.24■■■□□ 2.75
LMBR1-214ENST00000461469 ZBTB7AO95365 584 aa32.23■■■□□ 2.75
LMBR1-214ENST00000461469 AKT1S1Q96B36 256 aa32.21■■■□□ 2.75
LMBR1-214ENST00000461469 NKX1-1Q15270 411 aaPredicted RBP32.2■■■□□ 2.75
LMBR1-214ENST00000461469 SLC27A3Q5K4L6 730 aa32.2■■■□□ 2.75
LMBR1-214ENST00000461469 SPG7Q9UQ90 795 aa32.2■■■□□ 2.75
LMBR1-214ENST00000461469 QSER1Q2KHR3 1735 aa32.19■■■□□ 2.74
LMBR1-214ENST00000461469 CC2D1BQ5T0F9 858 aaKnown RBP32.18■■■□□ 2.74
LMBR1-214ENST00000461469 AEBP1Q8IUX7 1158 aa32.18■■■□□ 2.74
LMBR1-214ENST00000461469 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.18■■■□□ 2.742e-7■□□□□ 9.4
LMBR1-214ENST00000461469 MPRIPQ6WCQ1 1025 aa32.17■■■□□ 2.74
LMBR1-214ENST00000461469 PHKG2P15735 406 aa32.16■■■□□ 2.74
LMBR1-214ENST00000461469 PTGER2P43116 358 aa32.16■■■□□ 2.74
LMBR1-214ENST00000461469 ATF5Q9Y2D1 282 aaPredicted RBP32.16■■■□□ 2.74
LMBR1-214ENST00000461469 TAF1LQ8IZX4 1826 aa32.15■■■□□ 2.74
LMBR1-214ENST00000461469 IL13P35225 146 aa32.15■■■□□ 2.74
LMBR1-214ENST00000461469 CCNL1Q9UK58 526 aaPredicted RBP32.15■■■□□ 2.74
LMBR1-214ENST00000461469 C5P01031 1676 aa32.13■■■□□ 2.73
LMBR1-214ENST00000461469 PIGBQ92521 554 aa32.13■■■□□ 2.73
LMBR1-214ENST00000461469 PALLDQ8WX93 1383 aa32.12■■■□□ 2.73
LMBR1-214ENST00000461469 MTHFSP49914 203 aa32.12■■■□□ 2.73
LMBR1-214ENST00000461469 PNPLA7Q6ZV29 1317 aa32.11■■■□□ 2.73
LMBR1-214ENST00000461469 CNGB1Q14028 1251 aaPredicted RBP32.1■■■□□ 2.73
LMBR1-214ENST00000461469 IFNL2Q8IZJ0 200 aa32.1■■■□□ 2.73
LMBR1-214ENST00000461469 SGIP1Q9BQI5 828 aa32.1■■■□□ 2.73
LMBR1-214ENST00000461469 PLEKHG2Q9H7P9 1386 aa32.09■■■□□ 2.73
LMBR1-214ENST00000461469 NPC1L1Q9UHC9 1359 aa32.08■■■□□ 2.73
LMBR1-214ENST00000461469 MTFR1LQ9H019 292 aa32.08■■■□□ 2.73
LMBR1-214ENST00000461469 PPP1R1BQ9UD71 204 aaPredicted RBP32.08■■■□□ 2.73
LMBR1-214ENST00000461469 KDRP35968 1356 aa32.07■■■□□ 2.73
LMBR1-214ENST00000461469 SULT6B1Q6IMI4 303 aa32.07■■■□□ 2.72
LMBR1-214ENST00000461469 COL24A1Q17RW2 1714 aa32.06■■■□□ 2.72
LMBR1-214ENST00000461469 KDM6AO15550 1401 aaPredicted RBP32.05■■■□□ 2.72
LMBR1-214ENST00000461469 COL3A1P02461 1466 aaPredicted RBP32.03■■■□□ 2.72
LMBR1-214ENST00000461469 TFCP2L1Q9NZI6 479 aa32.03■■■□□ 2.72
LMBR1-214ENST00000461469 PLEKHO1Q53GL0 409 aaPredicted RBP32.02■■■□□ 2.72
LMBR1-214ENST00000461469 ZNF530Q6P9A1 599 aaPredicted RBP32.02■■■□□ 2.72
LMBR1-214ENST00000461469 ASAP1Q9ULH1 1129 aa32.02■■■□□ 2.72
LMBR1-214ENST00000461469 C4BP0C0L5 1744 aa32.01■■■□□ 2.72
LMBR1-214ENST00000461469 TMOD3Q9NYL9 352 aa32.01■■■□□ 2.71
LMBR1-214ENST00000461469 SMARCC1Q92922 1105 aaPredicted RBP31.99■■■□□ 2.71
LMBR1-214ENST00000461469 AMIGO3Q86WK7 504 aa31.98■■■□□ 2.71
LMBR1-214ENST00000461469 HMOX1P09601 288 aa31.97■■■□□ 2.71
LMBR1-214ENST00000461469 AMOTQ4VCS5 1084 aa31.97■■■□□ 2.71
LMBR1-214ENST00000461469 COL23A1Q86Y22 540 aaPredicted RBP31.97■■■□□ 2.71
LMBR1-214ENST00000461469 ATG3Q9NT62 314 aa31.97■■■□□ 2.71
LMBR1-214ENST00000461469 UBR3Q6ZT12 1888 aa31.96■■■□□ 2.71
LMBR1-214ENST00000461469 SCN11AQ9UI33 1791 aa31.95■■■□□ 2.71
LMBR1-214ENST00000461469 SMIM5Q71RC9 77 aa31.95■■■□□ 2.71
LMBR1-214ENST00000461469 DCAF5Q96JK2 942 aa31.95■■■□□ 2.71
LMBR1-214ENST00000461469 VIRMAQ69YN4 1812 aaKnown RBP31.94■■■□□ 2.7
LMBR1-214ENST00000461469 LOC102724428A0A0B4J2F2 783 aa31.94■■■□□ 2.7
LMBR1-214ENST00000461469 SIK1P57059 783 aa31.94■■■□□ 2.7
LMBR1-214ENST00000461469 ERVV-2B6SEH9 535 aa31.93■■■□□ 2.7
LMBR1-214ENST00000461469 DIAPH1O60610 1272 aaKnown RBP31.93■■■□□ 2.7
LMBR1-214ENST00000461469 ITPK1Q13572 414 aa31.93■■■□□ 2.7
LMBR1-214ENST00000461469 LINC00116Q8NCU8 138 aa31.93■■■□□ 2.7
LMBR1-214ENST00000461469 SLC16A10Q8TF71 515 aa31.93■■■□□ 2.7
LMBR1-214ENST00000461469 FHDC1Q9C0D6 1143 aaPredicted RBP31.93■■■□□ 2.7
LMBR1-214ENST00000461469 HSP90AB1P08238 724 aaKnown RBP31.91■■■□□ 2.7
LMBR1-214ENST00000461469 SLC4A9Q96Q91 983 aa31.91■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms