RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 PPM1GO15355 546 aaPredicted RBP21.47■■□□□ 1.03
NUP50-213ENST00000461437 INSRP06213 1382 aa21.47■■□□□ 1.03
NUP50-213ENST00000461437 FLT4P35916 1363 aa21.47■■□□□ 1.03
NUP50-213ENST00000461437 SMG6Q86US8 1419 aaKnown RBP21.46■■□□□ 1.03
NUP50-213ENST00000461437 TNNT2P45379 298 aaPredicted RBP21.45■■□□□ 1.02
NUP50-213ENST00000461437 PANK3Q9H999 370 aa21.44■■□□□ 1.02
NUP50-213ENST00000461437 CGNL1Q0VF96 1302 aa21.44■■□□□ 1.02
NUP50-213ENST00000461437 ZCRB1Q8TBF4 217 aaKnown RBP21.43■■□□□ 1.02
NUP50-213ENST00000461437 PAPPAQ13219 1627 aa21.42■■□□□ 1.02
NUP50-213ENST00000461437 SYTL4Q96C24 671 aaPredicted RBP21.42■■□□□ 1.02
NUP50-213ENST00000461437 PRIM1P49642 420 aaKnown RBP21.4■■□□□ 1.02
NUP50-213ENST00000461437 RAPGEF4Q8WZA2 1011 aa21.4■■□□□ 1.02
NUP50-213ENST00000461437 TUBGCP6Q96RT7 1819 aa21.39■■□□□ 1.02
NUP50-213ENST00000461437 TOGARAM1Q9Y4F4 1720 aa21.39■■□□□ 1.01
NUP50-213ENST00000461437 KCNQ4P56696 695 aa21.39■■□□□ 1.01
NUP50-213ENST00000461437 POLKQ9UBT6 870 aa21.39■■□□□ 1.01
NUP50-213ENST00000461437 LY75O60449 1722 aa21.38■■□□□ 1.01
NUP50-213ENST00000461437 PKD1L3Q7Z443 1732 aa21.38■■□□□ 1.01
NUP50-213ENST00000461437 NSD2O96028 1365 aa21.38■■□□□ 1.01
NUP50-213ENST00000461437 KIF24Q5T7B8 1368 aa21.38■■□□□ 1.01
NUP50-213ENST00000461437 TATP17735 454 aaPredicted RBP21.38■■□□□ 1.01
NUP50-213ENST00000461437 LRRC4BQ9NT99 713 aa21.38■■□□□ 1.01
NUP50-213ENST00000461437 STK32BQ9NY57 414 aa21.38■■□□□ 1.01
NUP50-213ENST00000461437 ITGB4P16144 1822 aa21.38■■□□□ 1.01
NUP50-213ENST00000461437 ZBTB7AO95365 584 aa21.37■■□□□ 1.01
NUP50-213ENST00000461437 SLC15A2Q16348 729 aa21.37■■□□□ 1.01
NUP50-213ENST00000461437 WASHC2AQ641Q2 1341 aa21.35■■□□□ 1.01
NUP50-213ENST00000461437 ZNF827Q17R98 1081 aa21.35■■□□□ 1.01
NUP50-213ENST00000461437 SPON1Q9HCB6 807 aa21.35■■□□□ 1.01
NUP50-213ENST00000461437 EYA1Q99502 592 aa21.34■■□□□ 1.01
NUP50-213ENST00000461437 KIF7Q2M1P5 1343 aa21.33■■□□□ 1.01
NUP50-213ENST00000461437 NCAPD2Q15021 1401 aa21.33■■□□□ 1.01
NUP50-213ENST00000461437 ATF5Q9Y2D1 282 aaPredicted RBP21.33■■□□□ 1.01
NUP50-213ENST00000461437 CYP27B1O15528 508 aa21.32■■□□□ 1
NUP50-213ENST00000461437 EIF4A2Q14240 407 aaKnown RBP21.32■■□□□ 1
NUP50-213ENST00000461437 PPP1R1BQ9UD71 204 aaPredicted RBP21.32■■□□□ 1
NUP50-213ENST00000461437 PCDH11XQ9BZA7 1347 aa21.3■■□□□ 1
NUP50-213ENST00000461437 PCDH11YQ9BZA8 1340 aa21.3■■□□□ 1
NUP50-213ENST00000461437 QSER1Q2KHR3 1735 aa21.29■■□□□ 1
NUP50-213ENST00000461437 MORC1Q86VD1 984 aa21.28■■□□□ 1
NUP50-213ENST00000461437 TAF1LQ8IZX4 1826 aa21.27■■□□□ 1
NUP50-213ENST00000461437 C5P01031 1676 aa21.26■□□□□ 0.99
NUP50-213ENST00000461437 PTGER2P43116 358 aa21.26■□□□□ 0.99
NUP50-213ENST00000461437 MPRIPQ6WCQ1 1025 aa21.26■□□□□ 0.99
NUP50-213ENST00000461437 AKT1S1Q96B36 256 aa21.26■□□□□ 0.99
NUP50-213ENST00000461437 KNSTRNQ9Y448 316 aa21.26■□□□□ 0.99
NUP50-213ENST00000461437 CCNL1Q9UK58 526 aaPredicted RBP21.25■□□□□ 0.99
NUP50-213ENST00000461437 CNGB1Q14028 1251 aaPredicted RBP21.24■□□□□ 0.99
NUP50-213ENST00000461437 SLC27A3Q5K4L6 730 aa21.24■□□□□ 0.99
NUP50-213ENST00000461437 AMER1Q5JTC6 1135 aaPredicted RBP21.23■□□□□ 0.99
NUP50-213ENST00000461437 PNPLA7Q6ZV29 1317 aa21.23■□□□□ 0.99
NUP50-213ENST00000461437 SPG7Q9UQ90 795 aa21.22■□□□□ 0.99
NUP50-213ENST00000461437 AEBP1Q8IUX7 1158 aa21.21■□□□□ 0.99
NUP50-213ENST00000461437 MTFR1LQ9H019 292 aa21.21■□□□□ 0.99
NUP50-213ENST00000461437 IGSF1Q8N6C5 1336 aa21.21■□□□□ 0.99
NUP50-213ENST00000461437 PALLDQ8WX93 1383 aa21.21■□□□□ 0.99
NUP50-213ENST00000461437 PHKG2P15735 406 aa21.19■□□□□ 0.98
NUP50-213ENST00000461437 CC2D1BQ5T0F9 858 aaKnown RBP21.19■□□□□ 0.98
NUP50-213ENST00000461437 PIGBQ92521 554 aa21.19■□□□□ 0.98
NUP50-213ENST00000461437 SGIP1Q9BQI5 828 aa21.19■□□□□ 0.98
NUP50-213ENST00000461437 TFCP2L1Q9NZI6 479 aa21.19■□□□□ 0.98
NUP50-213ENST00000461437 NKX1-1Q15270 411 aaPredicted RBP21.17■□□□□ 0.98
NUP50-213ENST00000461437 COL24A1Q17RW2 1714 aa21.17■□□□□ 0.98
NUP50-213ENST00000461437 C4BP0C0L5 1744 aa21.16■□□□□ 0.98
NUP50-213ENST00000461437 PER1O15534 1290 aaPredicted RBP21.16■□□□□ 0.98
NUP50-213ENST00000461437 IFNL2Q8IZJ0 200 aa21.16■□□□□ 0.98
NUP50-213ENST00000461437 FHDC1Q9C0D6 1143 aaPredicted RBP21.16■□□□□ 0.98
NUP50-213ENST00000461437 VIRMAQ69YN4 1812 aaKnown RBP21.15■□□□□ 0.98
NUP50-213ENST00000461437 SMIM5Q71RC9 77 aa21.15■□□□□ 0.98
NUP50-213ENST00000461437 UBR3Q6ZT12 1888 aa21.14■□□□□ 0.97
NUP50-213ENST00000461437 MSH5O43196 834 aa21.14■□□□□ 0.97
NUP50-213ENST00000461437 YY1P25490 414 aa21.14■□□□□ 0.97
NUP50-213ENST00000461437 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.14■□□□□ 0.974e-6■□□□□ 11.2
NUP50-213ENST00000461437 IL13P35225 146 aa21.13■□□□□ 0.97
NUP50-213ENST00000461437 SULT6B1Q6IMI4 303 aa21.13■□□□□ 0.97
NUP50-213ENST00000461437 COL23A1Q86Y22 540 aaPredicted RBP21.13■□□□□ 0.97
NUP50-213ENST00000461437 TMOD3Q9NYL9 352 aa21.13■□□□□ 0.97
NUP50-213ENST00000461437 ASAP1Q9ULH1 1129 aa21.13■□□□□ 0.97
NUP50-213ENST00000461437 MTHFSP49914 203 aa21.12■□□□□ 0.97
NUP50-213ENST00000461437 AMIGO3Q86WK7 504 aa21.12■□□□□ 0.97
NUP50-213ENST00000461437 KLHL34Q8N239 644 aa21.12■□□□□ 0.97
NUP50-213ENST00000461437 ARXQ96QS3 562 aa21.12■□□□□ 0.97
NUP50-213ENST00000461437 MSL1Q68DK7 614 aa21.11■□□□□ 0.97
NUP50-213ENST00000461437 ZNF530Q6P9A1 599 aaPredicted RBP21.11■□□□□ 0.97
NUP50-213ENST00000461437 SYT17Q9BSW7 474 aa21.11■□□□□ 0.97
NUP50-213ENST00000461437 KDM6AO15550 1401 aaPredicted RBP21.11■□□□□ 0.97
NUP50-213ENST00000461437 PLEKHO1Q53GL0 409 aaPredicted RBP21.1■□□□□ 0.97
NUP50-213ENST00000461437 SMARCC1Q92922 1105 aaPredicted RBP21.09■□□□□ 0.97
NUP50-213ENST00000461437 SCN11AQ9UI33 1791 aa21.09■□□□□ 0.97
NUP50-213ENST00000461437 HMOX1P09601 288 aa21.08■□□□□ 0.97
NUP50-213ENST00000461437 LINC00116Q8NCU8 138 aa21.08■□□□□ 0.97
NUP50-213ENST00000461437 ATG3Q9NT62 314 aa21.08■□□□□ 0.97
NUP50-213ENST00000461437 LOC102724428A0A0B4J2F2 783 aa21.07■□□□□ 0.96
NUP50-213ENST00000461437 PHF14O94880 888 aa21.07■□□□□ 0.96
NUP50-213ENST00000461437 SIK1P57059 783 aa21.07■□□□□ 0.96
NUP50-213ENST00000461437 ITPK1Q13572 414 aa21.07■□□□□ 0.96
NUP50-213ENST00000461437 SLC16A10Q8TF71 515 aa21.07■□□□□ 0.96
NUP50-213ENST00000461437 KDRP35968 1356 aa21.06■□□□□ 0.96
NUP50-213ENST00000461437 AK7Q96M32 723 aa21.05■□□□□ 0.96
NUP50-213ENST00000461437 COL5A3P25940 1745 aaPredicted RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms