RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 TNNT2P45379 298 aaPredicted RBP21.08■□□□□ 0.97
VARS-219ENST00000461328 KNSTRNQ9Y448 316 aa21.08■□□□□ 0.97
VARS-219ENST00000461328 TXNRD1Q16881 649 aa21.07■□□□□ 0.96
VARS-219ENST00000461328 PROM2Q8N271 834 aa21.07■□□□□ 0.96
VARS-219ENST00000461328 NSD2O96028 1365 aa21.07■□□□□ 0.96
VARS-219ENST00000461328 TATP17735 454 aaPredicted RBP21.06■□□□□ 0.96
VARS-219ENST00000461328 WASHC2AQ641Q2 1341 aa21.05■□□□□ 0.96
VARS-219ENST00000461328 POLKQ9UBT6 870 aa21.05■□□□□ 0.96
VARS-219ENST00000461328 MAP2P11137 1827 aaKnown RBP21.04■□□□□ 0.96
VARS-219ENST00000461328 BTAF1O14981 1849 aa21.04■□□□□ 0.96
VARS-219ENST00000461328 SHANK3Q9BYB0 1731 aa21.04■□□□□ 0.96
VARS-219ENST00000461328 SYTL4Q96C24 671 aaPredicted RBP21.03■□□□□ 0.96
VARS-219ENST00000461328 ANO8Q9HCE9 1232 aaPredicted RBP21.03■□□□□ 0.96
VARS-219ENST00000461328 MORC1Q86VD1 984 aa21.02■□□□□ 0.96
VARS-219ENST00000461328 KAT6BQ8WYB5 2073 aa21.01■□□□□ 0.95
VARS-219ENST00000461328 DOT1LQ8TEK3 1739 aa21.01■□□□□ 0.95
VARS-219ENST00000461328 PRIM1P49642 420 aaKnown RBP21■□□□□ 0.95
VARS-219ENST00000461328 STK32BQ9NY57 414 aa21■□□□□ 0.95
VARS-219ENST00000461328 PCDH11XQ9BZA7 1347 aa21■□□□□ 0.95
VARS-219ENST00000461328 PCDH11YQ9BZA8 1340 aa21■□□□□ 0.95
VARS-219ENST00000461328 NCAPD2Q15021 1401 aa20.98■□□□□ 0.95
VARS-219ENST00000461328 EYA1Q99502 592 aa20.98■□□□□ 0.95
VARS-219ENST00000461328 EIF4A2Q14240 407 aaKnown RBP20.97■□□□□ 0.95
VARS-219ENST00000461328 SLC15A2Q16348 729 aa20.95■□□□□ 0.94
VARS-219ENST00000461328 AMER1Q5JTC6 1135 aaPredicted RBP20.95■□□□□ 0.94
VARS-219ENST00000461328 SPON1Q9HCB6 807 aa20.95■□□□□ 0.94
VARS-219ENST00000461328 SPG7Q9UQ90 795 aa20.95■□□□□ 0.94
VARS-219ENST00000461328 CNGB1Q14028 1251 aaPredicted RBP20.94■□□□□ 0.94
VARS-219ENST00000461328 PKD1L3Q7Z443 1732 aa20.94■□□□□ 0.94
VARS-219ENST00000461328 CYP27B1O15528 508 aa20.93■□□□□ 0.94
VARS-219ENST00000461328 SLC27A3Q5K4L6 730 aa20.93■□□□□ 0.94
VARS-219ENST00000461328 CC2D1BQ5T0F9 858 aaKnown RBP20.93■□□□□ 0.94
VARS-219ENST00000461328 CASZ1Q86V15 1759 aa20.92■□□□□ 0.94
VARS-219ENST00000461328 LRRC4BQ9NT99 713 aa20.92■□□□□ 0.94
VARS-219ENST00000461328 PAPPAQ13219 1627 aa20.92■□□□□ 0.94
VARS-219ENST00000461328 PDGFDQ9GZP0 370 aaPredicted RBP20.91■□□□□ 0.94
VARS-219ENST00000461328 PPP1R1BQ9UD71 204 aaPredicted RBP20.91■□□□□ 0.94
VARS-219ENST00000461328 IGSF1Q8N6C5 1336 aa20.9■□□□□ 0.94
VARS-219ENST00000461328 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.9■□□□□ 0.94
VARS-219ENST00000461328 PER1O15534 1290 aaPredicted RBP20.89■□□□□ 0.93
VARS-219ENST00000461328 ZBTB7AO95365 584 aa20.89■□□□□ 0.93
VARS-219ENST00000461328 KCNQ4P56696 695 aa20.88■□□□□ 0.93
VARS-219ENST00000461328 ZNF827Q17R98 1081 aa20.88■□□□□ 0.93
VARS-219ENST00000461328 MPRIPQ6WCQ1 1025 aa20.88■□□□□ 0.93
VARS-219ENST00000461328 CCNL1Q9UK58 526 aaPredicted RBP20.87■□□□□ 0.93
VARS-219ENST00000461328 LY75O60449 1722 aa20.87■□□□□ 0.93
VARS-219ENST00000461328 NKX1-1Q15270 411 aaPredicted RBP20.86■□□□□ 0.93
VARS-219ENST00000461328 TOGARAM1Q9Y4F4 1720 aa20.86■□□□□ 0.93
VARS-219ENST00000461328 PLEKHG2Q9H7P9 1386 aa20.85■□□□□ 0.93
VARS-219ENST00000461328 IFNL2Q8IZJ0 200 aa20.85■□□□□ 0.93
VARS-219ENST00000461328 ATF5Q9Y2D1 282 aaPredicted RBP20.85■□□□□ 0.93
VARS-219ENST00000461328 NPC1L1Q9UHC9 1359 aa20.85■□□□□ 0.93
VARS-219ENST00000461328 PHKG2P15735 406 aa20.84■□□□□ 0.93
VARS-219ENST00000461328 AKT1S1Q96B36 256 aa20.84■□□□□ 0.93
VARS-219ENST00000461328 MTHFSP49914 203 aa20.83■□□□□ 0.93
VARS-219ENST00000461328 MTFR1LQ9H019 292 aa20.83■□□□□ 0.93
VARS-219ENST00000461328 PALLDQ8WX93 1383 aa20.83■□□□□ 0.92
VARS-219ENST00000461328 PLEKHO1Q53GL0 409 aaPredicted RBP20.82■□□□□ 0.92
VARS-219ENST00000461328 AEBP1Q8IUX7 1158 aa20.82■□□□□ 0.92
VARS-219ENST00000461328 TFCP2L1Q9NZI6 479 aa20.82■□□□□ 0.92
VARS-219ENST00000461328 ITGB4P16144 1822 aa20.81■□□□□ 0.92
VARS-219ENST00000461328 IL13P35225 146 aa20.81■□□□□ 0.92
VARS-219ENST00000461328 SMARCC1Q92922 1105 aaPredicted RBP20.81■□□□□ 0.92
VARS-219ENST00000461328 TMOD3Q9NYL9 352 aa20.81■□□□□ 0.92
VARS-219ENST00000461328 SULT6B1Q6IMI4 303 aa20.8■□□□□ 0.92
VARS-219ENST00000461328 PIGBQ92521 554 aa20.8■□□□□ 0.92
VARS-219ENST00000461328 PTGER2P43116 358 aa20.79■□□□□ 0.92
VARS-219ENST00000461328 AMOTQ4VCS5 1084 aa20.79■□□□□ 0.92
VARS-219ENST00000461328 HSP90AB1P08238 724 aaKnown RBP20.78■□□□□ 0.92
VARS-219ENST00000461328 HMGB2P26583 209 aaKnown RBP20.78■□□□□ 0.92
VARS-219ENST00000461328 ZNF530Q6P9A1 599 aaPredicted RBP20.78■□□□□ 0.92
VARS-219ENST00000461328 QSER1Q2KHR3 1735 aa20.78■□□□□ 0.92
VARS-219ENST00000461328 PNPLA7Q6ZV29 1317 aa20.78■□□□□ 0.92
VARS-219ENST00000461328 KDRP35968 1356 aa20.76■□□□□ 0.91
VARS-219ENST00000461328 SLC16A10Q8TF71 515 aa20.76■□□□□ 0.91
VARS-219ENST00000461328 C5P01031 1676 aa20.76■□□□□ 0.91
VARS-219ENST00000461328 C1orf141Q5JVX7 400 aa20.75■□□□□ 0.91
VARS-219ENST00000461328 DCAF5Q96JK2 942 aa20.75■□□□□ 0.91
VARS-219ENST00000461328 TUBGCP6Q96RT7 1819 aa20.75■□□□□ 0.91
VARS-219ENST00000461328 MSH5O43196 834 aa20.74■□□□□ 0.91
VARS-219ENST00000461328 DIAPH1O60610 1272 aaKnown RBP20.74■□□□□ 0.91
VARS-219ENST00000461328 ERVV-2B6SEH9 535 aa20.73■□□□□ 0.91
VARS-219ENST00000461328 ZEB1P37275 1124 aaPredicted RBP20.73■□□□□ 0.91
VARS-219ENST00000461328 SGIP1Q9BQI5 828 aa20.73■□□□□ 0.91
VARS-219ENST00000461328 ASAP1Q9ULH1 1129 aa20.73■□□□□ 0.91
VARS-219ENST00000461328 LOC102724428A0A0B4J2F2 783 aa20.72■□□□□ 0.91
VARS-219ENST00000461328 HMOX1P09601 288 aa20.72■□□□□ 0.91
VARS-219ENST00000461328 SIK1P57059 783 aa20.72■□□□□ 0.91
VARS-219ENST00000461328 ATG3Q9NT62 314 aa20.72■□□□□ 0.91
VARS-219ENST00000461328 KDM6AO15550 1401 aaPredicted RBP20.71■□□□□ 0.91
VARS-219ENST00000461328 AK7Q96M32 723 aa20.71■□□□□ 0.91
VARS-219ENST00000461328 CFAP53Q96M91 514 aa20.71■□□□□ 0.91
VARS-219ENST00000461328 ARXQ96QS3 562 aa20.71■□□□□ 0.91
VARS-219ENST00000461328 TAF1LQ8IZX4 1826 aa20.71■□□□□ 0.91
VARS-219ENST00000461328 DCAF8L1A6NGE4 600 aa20.7■□□□□ 0.9
VARS-219ENST00000461328 POLD1P28340 1107 aa20.7■□□□□ 0.9
VARS-219ENST00000461328 CABP4P57796 275 aa20.7■□□□□ 0.9
VARS-219ENST00000461328 COL23A1Q86Y22 540 aaPredicted RBP20.7■□□□□ 0.9
VARS-219ENST00000461328 FHDC1Q9C0D6 1143 aaPredicted RBP20.7■□□□□ 0.9
VARS-219ENST00000461328 C4BP0C0L5 1744 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms