RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 SLC27A3Q5K4L6 730 aa7.94□□□□□ -1.14
SPTLC1-203ENST00000461132 FOXD4L5Q5VV16 416 aaPredicted RBP7.94□□□□□ -1.14
SPTLC1-203ENST00000461132 KCNMA1Q12791 1236 aa7.93□□□□□ -1.14
SPTLC1-203ENST00000461132 CC2D2BQ6DHV5 1058 aa7.93□□□□□ -1.14
SPTLC1-203ENST00000461132 ADAMTS8Q9UP79 889 aa7.93□□□□□ -1.14
SPTLC1-203ENST00000461132 RHOQP17081 205 aa7.92□□□□□ -1.14
SPTLC1-203ENST00000461132 RNF144AP50876 292 aaPredicted RBP7.92□□□□□ -1.14
SPTLC1-203ENST00000461132 MARSP56192 900 aaKnown RBP7.92□□□□□ -1.14
SPTLC1-203ENST00000461132 NR1H3Q13133 447 aa7.92□□□□□ -1.14
SPTLC1-203ENST00000461132 RIPOR1Q6ZS17 1223 aa7.92□□□□□ -1.14
SPTLC1-203ENST00000461132 CYP2U1Q7Z449 544 aa7.92□□□□□ -1.14
SPTLC1-203ENST00000461132 NDUFB9Q9Y6M9 179 aa7.92□□□□□ -1.14
SPTLC1-203ENST00000461132 GPC1P35052 558 aa7.91□□□□□ -1.14
SPTLC1-203ENST00000461132 RNFT1Q5M7Z0 435 aa7.91□□□□□ -1.14
SPTLC1-203ENST00000461132 TMEM151AQ8N4L1 468 aa7.91□□□□□ -1.14
SPTLC1-203ENST00000461132 BANK1Q8NDB2 785 aa7.91□□□□□ -1.14
SPTLC1-203ENST00000461132 GMCL1Q96IK5 515 aa7.91□□□□□ -1.14
SPTLC1-203ENST00000461132 SENP3-EIF4A1A0A087X0R7 540 aa7.9□□□□□ -1.14
SPTLC1-203ENST00000461132 H7C1W4 665 aa7.9□□□□□ -1.14
SPTLC1-203ENST00000461132 ZNF385CQ66K41 422 aaPredicted RBP7.9□□□□□ -1.14
SPTLC1-203ENST00000461132 GJD4Q96KN9 370 aaPredicted RBP7.9□□□□□ -1.14
SPTLC1-203ENST00000461132 PRM3Q9NNZ6 103 aa7.9□□□□□ -1.14
SPTLC1-203ENST00000461132 ENAMQ9NRM1 1142 aa7.9□□□□□ -1.14
SPTLC1-203ENST00000461132 PCDHB11Q9Y5F2 797 aa7.9□□□□□ -1.14
SPTLC1-203ENST00000461132 A0A1W2PRU2 124 aa7.89□□□□□ -1.15
SPTLC1-203ENST00000461132 GDF11O95390 407 aa7.89□□□□□ -1.15
SPTLC1-203ENST00000461132 SLURP2P0DP57 97 aa7.89□□□□□ -1.15
SPTLC1-203ENST00000461132 ERVK-9P63128 1117 aa7.89□□□□□ -1.15
SPTLC1-203ENST00000461132 KDF1Q8NAX2 398 aaPredicted RBP7.89□□□□□ -1.15
SPTLC1-203ENST00000461132 TRERF1Q96PN7 1200 aa7.89□□□□□ -1.15
SPTLC1-203ENST00000461132 GAS2L1Q99501 681 aaPredicted RBP7.89□□□□□ -1.15
SPTLC1-203ENST00000461132 ADAMTS2O95450 1211 aa7.88□□□□□ -1.15
SPTLC1-203ENST00000461132 GTF2E1P29083 439 aaPredicted RBP7.88□□□□□ -1.15
SPTLC1-203ENST00000461132 RASSF7Q02833 373 aa7.88□□□□□ -1.15
SPTLC1-203ENST00000461132 SRSF11Q05519 484 aaKnown RBP7.88□□□□□ -1.15
SPTLC1-203ENST00000461132 MYCP01106 439 aaPredicted RBP7.87□□□□□ -1.15
SPTLC1-203ENST00000461132 TRIM22Q8IYM9 498 aa7.87□□□□□ -1.15
SPTLC1-203ENST00000461132 KCTD17Q8N5Z5 321 aa7.87□□□□□ -1.15
SPTLC1-203ENST00000461132 SCARF2Q96GP6 870 aaPredicted RBP7.87□□□□□ -1.15
SPTLC1-203ENST00000461132 PRKCSHP14314 528 aaPredicted RBP7.86□□□□□ -1.15
SPTLC1-203ENST00000461132 MBIPQ9NS73 344 aa7.86□□□□□ -1.15
SPTLC1-203ENST00000461132 NSFL1CQ9UNZ2 370 aaKnown RBP7.86□□□□□ -1.15
SPTLC1-203ENST00000461132 DYRK1BQ9Y463 629 aa7.86□□□□□ -1.15
SPTLC1-203ENST00000461132 SOCS7O14512 581 aa7.85□□□□□ -1.15
SPTLC1-203ENST00000461132 BRPF1P55201 1214 aaPredicted RBP7.85□□□□□ -1.15
SPTLC1-203ENST00000461132 POU4F2Q12837 409 aa7.85□□□□□ -1.15
SPTLC1-203ENST00000461132 CLN3Q13286 438 aa7.85□□□□□ -1.15
SPTLC1-203ENST00000461132 ZNF837Q96EG3 531 aaPredicted RBP7.85□□□□□ -1.15
SPTLC1-203ENST00000461132 ARHGEF10LQ9HCE6 1279 aa7.85□□□□□ -1.15
SPTLC1-203ENST00000461132 IRS1P35568 1242 aa7.84□□□□□ -1.15
SPTLC1-203ENST00000461132 KANK3Q6NY19 840 aa7.84□□□□□ -1.15
SPTLC1-203ENST00000461132 WHAMMQ8TF30 809 aa7.84□□□□□ -1.15
SPTLC1-203ENST00000461132 TIMMDC1Q9NPL8 285 aa7.84□□□□□ -1.15
SPTLC1-203ENST00000461132 CUEDC1Q9NWM3 386 aaPredicted RBP7.84□□□□□ -1.15
SPTLC1-203ENST00000461132 GPR25O00155 361 aa7.83□□□□□ -1.16
SPTLC1-203ENST00000461132 NBPF10Q6P3W6 841 aaKnown RBP7.83□□□□□ -1.16
SPTLC1-203ENST00000461132 TAS1R3Q7RTX0 852 aa7.83□□□□□ -1.16
SPTLC1-203ENST00000461132 NBPF15Q8N660 670 aa7.83□□□□□ -1.16
SPTLC1-203ENST00000461132 MTMR14Q8NCE2 650 aa7.83□□□□□ -1.16
SPTLC1-203ENST00000461132 WASLO00401 505 aaPredicted RBP7.82□□□□□ -1.16
SPTLC1-203ENST00000461132 ARHGEF15O94989 841 aa7.82□□□□□ -1.16
SPTLC1-203ENST00000461132 GNRH1P01148 92 aa7.82□□□□□ -1.16
SPTLC1-203ENST00000461132 SCTRP47872 440 aa7.82□□□□□ -1.16
SPTLC1-203ENST00000461132 EIF4G2P78344 907 aaKnown RBP eCLIP7.82□□□□□ -1.16
SPTLC1-203ENST00000461132 LYPD4Q6UWN0 246 aa7.82□□□□□ -1.16
SPTLC1-203ENST00000461132 PODNQ7Z5L7 613 aa7.82□□□□□ -1.16
SPTLC1-203ENST00000461132 NEDD1Q8NHV4 660 aa7.82□□□□□ -1.16
SPTLC1-203ENST00000461132 GTPBP3Q969Y2 492 aaKnown RBP7.82□□□□□ -1.16
SPTLC1-203ENST00000461132 RAB6BQ9NRW1 208 aa7.82□□□□□ -1.16
SPTLC1-203ENST00000461132 CELA2BP08218 269 aaPredicted RBP7.81□□□□□ -1.16
SPTLC1-203ENST00000461132 DBN1Q16643 649 aa7.81□□□□□ -1.16
SPTLC1-203ENST00000461132 WDR44Q5JSH3 913 aa7.81□□□□□ -1.16
SPTLC1-203ENST00000461132 GRIP2Q9C0E4 1043 aa7.81□□□□□ -1.16
SPTLC1-203ENST00000461132 NUCKS1Q9H1E3 243 aaKnown RBP7.81□□□□□ -1.16
SPTLC1-203ENST00000461132 OSBPL3Q9H4L5 887 aa7.81□□□□□ -1.16
SPTLC1-203ENST00000461132 IGF1RP08069 1367 aa7.81□□□□□ -1.16
SPTLC1-203ENST00000461132 PHF20L1A8MW92 1017 aa7.8□□□□□ -1.16
SPTLC1-203ENST00000461132 F11P03951 625 aa7.8□□□□□ -1.16
SPTLC1-203ENST00000461132 MX2P20592 715 aa7.8□□□□□ -1.16
SPTLC1-203ENST00000461132 GAS6Q14393 721 aa7.8□□□□□ -1.16
SPTLC1-203ENST00000461132 ESCO1Q5FWF5 840 aa7.8□□□□□ -1.16
SPTLC1-203ENST00000461132 GNASQ5JWF2 1037 aa7.8□□□□□ -1.16
SPTLC1-203ENST00000461132 TMEM214Q6NUQ4 689 aaKnown RBP7.8□□□□□ -1.16
SPTLC1-203ENST00000461132 CNKSR1Q969H4 720 aa7.8□□□□□ -1.16
SPTLC1-203ENST00000461132 SNRKQ9NRH2 765 aa7.8□□□□□ -1.16
SPTLC1-203ENST00000461132 DNMT3AQ9Y6K1 912 aaPredicted RBP7.8□□□□□ -1.16
SPTLC1-203ENST00000461132 SPATA31C2B4DYI2 1134 aa7.79□□□□□ -1.16
SPTLC1-203ENST00000461132 TRAK2O60296 914 aa7.79□□□□□ -1.16
SPTLC1-203ENST00000461132 CSB-PGBD3P0DP91 1061 aa7.79□□□□□ -1.16
SPTLC1-203ENST00000461132 SLFNL1Q499Z3 407 aa7.79□□□□□ -1.16
SPTLC1-203ENST00000461132 PGBD3Q8N328 593 aa7.79□□□□□ -1.16
SPTLC1-203ENST00000461132 ZSCAN10Q96SZ4 725 aaPredicted RBP7.79□□□□□ -1.16
SPTLC1-203ENST00000461132 ESYT1Q9BSJ8 1104 aa7.79□□□□□ -1.16
SPTLC1-203ENST00000461132 CEP126Q9P2H0 1117 aa7.79□□□□□ -1.16
SPTLC1-203ENST00000461132 PHF24Q9UPV7 400 aa7.79□□□□□ -1.16
SPTLC1-203ENST00000461132 GSK3AP49840 483 aa7.78□□□□□ -1.16
SPTLC1-203ENST00000461132 FOXK2Q01167 660 aa7.78□□□□□ -1.16
SPTLC1-203ENST00000461132 USP4Q13107 963 aa7.78□□□□□ -1.16
SPTLC1-203ENST00000461132 GPAT2Q6NUI2 795 aa7.78□□□□□ -1.16
SPTLC1-203ENST00000461132 SIRT1Q96EB6 747 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms