RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 TMC1Q8TDI8 760 aa24.52■■□□□ 1.52
TOP3A-202ENST00000461127 IP6K1Q92551 441 aa24.52■■□□□ 1.52
TOP3A-202ENST00000461127 LY75O60449 1722 aa24.52■■□□□ 1.52
TOP3A-202ENST00000461127 LTV1Q96GA3 475 aaPredicted RBP24.51■■□□□ 1.51
TOP3A-202ENST00000461127 EDC4Q6P2E9 1401 aaKnown RBP24.5■■□□□ 1.51
TOP3A-202ENST00000461127 DOT1LQ8TEK3 1739 aa24.49■■□□□ 1.51
TOP3A-202ENST00000461127 HMGB2P26583 209 aaKnown RBP24.49■■□□□ 1.51
TOP3A-202ENST00000461127 COL23A1Q86Y22 540 aaPredicted RBP24.49■■□□□ 1.51
TOP3A-202ENST00000461127 HSPA6P17066 643 aa24.48■■□□□ 1.51
TOP3A-202ENST00000461127 USP47Q96K76 1375 aa24.48■■□□□ 1.51
TOP3A-202ENST00000461127 CD163L1Q9NR16 1453 aa24.48■■□□□ 1.51
TOP3A-202ENST00000461127 TERF2IPQ9NYB0 399 aa24.48■■□□□ 1.51
TOP3A-202ENST00000461127 CD2APQ9Y5K6 639 aa24.48■■□□□ 1.51
TOP3A-202ENST00000461127 NSD2O96028 1365 aa24.47■■□□□ 1.51
TOP3A-202ENST00000461127 MSL1Q68DK7 614 aa24.47■■□□□ 1.51
TOP3A-202ENST00000461127 ZCRB1Q8TBF4 217 aaKnown RBP24.47■■□□□ 1.51
TOP3A-202ENST00000461127 FLAD1Q8NFF5 587 aa24.44■■□□□ 1.5
TOP3A-202ENST00000461127 SLC12A5Q9H2X9 1139 aa24.44■■□□□ 1.5
TOP3A-202ENST00000461127 ZNF526Q8TF50 670 aaPredicted RBP24.43■■□□□ 1.5
TOP3A-202ENST00000461127 AMPHP49418 695 aa24.41■■□□□ 1.5
TOP3A-202ENST00000461127 ADCY9O60503 1353 aa24.41■■□□□ 1.5
TOP3A-202ENST00000461127 A0A1W2PP64 1363 aa24.4■■□□□ 1.5
TOP3A-202ENST00000461127 HOXC9P31274 260 aa24.39■■□□□ 1.49
TOP3A-202ENST00000461127 COG3Q96JB2 828 aa24.39■■□□□ 1.49
TOP3A-202ENST00000461127 CGNL1Q0VF96 1302 aa24.38■■□□□ 1.49
TOP3A-202ENST00000461127 MAP3K19Q56UN5 1328 aa24.37■■□□□ 1.49
TOP3A-202ENST00000461127 MEGF6O75095 1541 aa24.37■■□□□ 1.49
TOP3A-202ENST00000461127 SIN3AQ96ST3 1273 aa24.37■■□□□ 1.49
TOP3A-202ENST00000461127 C5P01031 1676 aa24.37■■□□□ 1.49
TOP3A-202ENST00000461127 NEUROD1Q13562 356 aa24.36■■□□□ 1.49
TOP3A-202ENST00000461127 CARD11Q9BXL7 1154 aa24.36■■□□□ 1.49
TOP3A-202ENST00000461127 RAPGEF4Q8WZA2 1011 aa24.35■■□□□ 1.49
TOP3A-202ENST00000461127 RGPD2P0DJD1 1756 aa24.34■■□□□ 1.49
TOP3A-202ENST00000461127 PUS7Q96PZ0 661 aaKnown RBP24.33■■□□□ 1.49
TOP3A-202ENST00000461127 IGSF1Q8N6C5 1336 aa24.33■■□□□ 1.48
TOP3A-202ENST00000461127 AK7Q96M32 723 aa24.32■■□□□ 1.48
TOP3A-202ENST00000461127 PALLDQ8WX93 1383 aa24.31■■□□□ 1.48
TOP3A-202ENST00000461127 RTL1A6NKG5 1358 aa24.3■■□□□ 1.48
TOP3A-202ENST00000461127 SMG6Q86US8 1419 aaKnown RBP24.3■■□□□ 1.48
TOP3A-202ENST00000461127 TATP17735 454 aaPredicted RBP24.3■■□□□ 1.48
TOP3A-202ENST00000461127 TAF1LQ8IZX4 1826 aa24.3■■□□□ 1.48
TOP3A-202ENST00000461127 PCDH11XQ9BZA7 1347 aa24.3■■□□□ 1.48
TOP3A-202ENST00000461127 PCDH11YQ9BZA8 1340 aa24.3■■□□□ 1.48
TOP3A-202ENST00000461127 NSD3Q9BZ95 1437 aa24.29■■□□□ 1.48
TOP3A-202ENST00000461127 NBPF6Q5VWK0 638 aa24.29■■□□□ 1.48
TOP3A-202ENST00000461127 MPRIPQ6WCQ1 1025 aa24.29■■□□□ 1.48
TOP3A-202ENST00000461127 NBPF4Q96M43 638 aa24.29■■□□□ 1.48
TOP3A-202ENST00000461127 APLP1P51693 650 aa24.28■■□□□ 1.48
TOP3A-202ENST00000461127 SMARCC1Q92922 1105 aaPredicted RBP24.28■■□□□ 1.48
TOP3A-202ENST00000461127 WWC3Q9ULE0 1092 aa24.28■■□□□ 1.48
TOP3A-202ENST00000461127 FBLN1P23142 703 aa24.27■■□□□ 1.48
TOP3A-202ENST00000461127 USHBP1Q8N6Y0 703 aa24.27■■□□□ 1.48
TOP3A-202ENST00000461127 KIF3CO14782 793 aa24.26■■□□□ 1.47
TOP3A-202ENST00000461127 C4BP0C0L5 1744 aa24.26■■□□□ 1.47
TOP3A-202ENST00000461127 PHF14O94880 888 aa24.25■■□□□ 1.47
TOP3A-202ENST00000461127 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.23■■□□□ 1.47
TOP3A-202ENST00000461127 RRS1Q15050 365 aaKnown RBP24.23■■□□□ 1.47
TOP3A-202ENST00000461127 SSFA2P28290 1259 aa24.22■■□□□ 1.47
TOP3A-202ENST00000461127 UBR3Q6ZT12 1888 aa24.21■■□□□ 1.47
TOP3A-202ENST00000461127 TOMM70O94826 608 aa24.2■■□□□ 1.46
TOP3A-202ENST00000461127 SLC24A1O60721 1099 aa24.19■■□□□ 1.46
TOP3A-202ENST00000461127 AMIGO3Q86WK7 504 aa24.19■■□□□ 1.46
TOP3A-202ENST00000461127 TOGARAM1Q9Y4F4 1720 aa24.18■■□□□ 1.46
TOP3A-202ENST00000461127 ITGB4P16144 1822 aa24.17■■□□□ 1.46
TOP3A-202ENST00000461127 CYP27B1O15528 508 aa24.17■■□□□ 1.46
TOP3A-202ENST00000461127 CICQ96RK0 1608 aaPredicted RBP24.17■■□□□ 1.46
TOP3A-202ENST00000461127 TRIM26Q12899 539 aaPredicted RBP24.16■■□□□ 1.46
TOP3A-202ENST00000461127 INSRP06213 1382 aa24.16■■□□□ 1.46
TOP3A-202ENST00000461127 SMIM5Q71RC9 77 aa24.15■■□□□ 1.46
TOP3A-202ENST00000461127 DNAJC5GQ8N7S2 189 aa24.15■■□□□ 1.46
TOP3A-202ENST00000461127 LOC102724428A0A0B4J2F2 783 aa24.14■■□□□ 1.45
TOP3A-202ENST00000461127 SIK1P57059 783 aa24.14■■□□□ 1.45
TOP3A-202ENST00000461127 HSP90AB2PQ58FF8 381 aa24.14■■□□□ 1.45
TOP3A-202ENST00000461127 PIGBQ92521 554 aa24.14■■□□□ 1.45
TOP3A-202ENST00000461127 GGNBP2Q9H3C7 697 aa24.14■■□□□ 1.45
TOP3A-202ENST00000461127 FLT4P35916 1363 aa24.14■■□□□ 1.45
TOP3A-202ENST00000461127 FYB1O15117 783 aa24.13■■□□□ 1.45
TOP3A-202ENST00000461127 GNPATO15228 680 aa24.13■■□□□ 1.45
TOP3A-202ENST00000461127 LINC00116Q8NCU8 138 aa24.13■■□□□ 1.45
TOP3A-202ENST00000461127 TGFB2P61812 414 aa24.12■■□□□ 1.45
TOP3A-202ENST00000461127 BCS1LQ9Y276 419 aa24.12■■□□□ 1.45
TOP3A-202ENST00000461127 KIF24Q5T7B8 1368 aa24.12■■□□□ 1.45
TOP3A-202ENST00000461127 MMP10P09238 476 aa24.11■■□□□ 1.45
TOP3A-202ENST00000461127 TESK2Q96S53 571 aa24.11■■□□□ 1.45
TOP3A-202ENST00000461127 SPG7Q9UQ90 795 aa24.1■■□□□ 1.45
TOP3A-202ENST00000461127 PXDNLA1KZ92 1463 aa24.09■■□□□ 1.45
TOP3A-202ENST00000461127 ST20-MTHFSA0A0A6YYL1 179 aa24.09■■□□□ 1.45
TOP3A-202ENST00000461127 NKX1-1Q15270 411 aaPredicted RBP24.09■■□□□ 1.45
TOP3A-202ENST00000461127 ARHGAP27Q6ZUM4 889 aa24.09■■□□□ 1.45
TOP3A-202ENST00000461127 TMOD3Q9NYL9 352 aa24.09■■□□□ 1.45
TOP3A-202ENST00000461127 MAP2P11137 1827 aaKnown RBP24.08■■□□□ 1.45
TOP3A-202ENST00000461127 PKD1L3Q7Z443 1732 aa24.08■■□□□ 1.45
TOP3A-202ENST00000461127 ATP6V1AP38606 617 aa24.08■■□□□ 1.45
TOP3A-202ENST00000461127 C16orf71Q8IYS4 520 aaPredicted RBP24.08■■□□□ 1.45
TOP3A-202ENST00000461127 NMRK2Q9NPI5 230 aa24.07■■□□□ 1.44
TOP3A-202ENST00000461127 KIF13BQ9NQT8 1826 aa24.07■■□□□ 1.44
TOP3A-202ENST00000461127 TONSLQ96HA7 1378 aa24.06■■□□□ 1.44
TOP3A-202ENST00000461127 NLGN1Q8N2Q7 840 aa24.06■■□□□ 1.44
TOP3A-202ENST00000461127 RBM46Q8TBY0 533 aaKnown RBP24.06■■□□□ 1.44
TOP3A-202ENST00000461127 WDR90Q96KV7 1748 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms