RNA–Protein interactions for RNA: ENST00000461099.1

HMG20B-207, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-207ENST00000461099 PNPLA7Q6ZV29 1317 aa30.79■■■□□ 2.52
HMG20B-207ENST00000461099 QSER1Q2KHR3 1735 aa30.79■■■□□ 2.52
HMG20B-207ENST00000461099 RTL1A6NKG5 1358 aa30.78■■■□□ 2.52
HMG20B-207ENST00000461099 NSD2O96028 1365 aa30.78■■■□□ 2.52
HMG20B-207ENST00000461099 CHD4Q14839 1912 aa30.77■■■□□ 2.52
HMG20B-207ENST00000461099 FYB1O15117 783 aa30.77■■■□□ 2.52
HMG20B-207ENST00000461099 RRS1Q15050 365 aaKnown RBP30.77■■■□□ 2.52
HMG20B-207ENST00000461099 DOT1LQ8TEK3 1739 aa30.77■■■□□ 2.52
HMG20B-207ENST00000461099 MEGF6O75095 1541 aa30.77■■■□□ 2.52
HMG20B-207ENST00000461099 POLD1P28340 1107 aa30.76■■■□□ 2.51
HMG20B-207ENST00000461099 NBPF6Q5VWK0 638 aa30.76■■■□□ 2.51
HMG20B-207ENST00000461099 NBPF4Q96M43 638 aa30.76■■■□□ 2.51
HMG20B-207ENST00000461099 SHANK3Q9BYB0 1731 aa30.76■■■□□ 2.51
HMG20B-207ENST00000461099 LY75O60449 1722 aa30.74■■■□□ 2.51
HMG20B-207ENST00000461099 GGNBP2Q9H3C7 697 aa30.74■■■□□ 2.51
HMG20B-207ENST00000461099 CGNL1Q0VF96 1302 aa30.73■■■□□ 2.51
HMG20B-207ENST00000461099 TMF1P82094 1093 aa30.73■■■□□ 2.51
HMG20B-207ENST00000461099 GPR162Q16538 588 aa30.73■■■□□ 2.51
HMG20B-207ENST00000461099 COL24A1Q17RW2 1714 aa30.72■■■□□ 2.51
HMG20B-207ENST00000461099 TUBGCP6Q96RT7 1819 aa30.71■■■□□ 2.51
HMG20B-207ENST00000461099 KLHL34Q8N239 644 aa30.71■■■□□ 2.51
HMG20B-207ENST00000461099 USHBP1Q8N6Y0 703 aa30.71■■■□□ 2.51
HMG20B-207ENST00000461099 RAPGEF4Q8WZA2 1011 aa30.71■■■□□ 2.51
HMG20B-207ENST00000461099 CCNL1Q9UK58 526 aaPredicted RBP30.71■■■□□ 2.51
HMG20B-207ENST00000461099 GOLGB1Q14789 3259 aaKnown RBP30.69■■■□□ 2.5
HMG20B-207ENST00000461099 SMG6Q86US8 1419 aaKnown RBP30.69■■■□□ 2.5
HMG20B-207ENST00000461099 USP47Q96K76 1375 aa30.68■■■□□ 2.5
HMG20B-207ENST00000461099 TATP17735 454 aaPredicted RBP30.66■■■□□ 2.5
HMG20B-207ENST00000461099 HSP90AB2PQ58FF8 381 aa30.65■■■□□ 2.5
HMG20B-207ENST00000461099 INSRP06213 1382 aa30.65■■■□□ 2.5
HMG20B-207ENST00000461099 MSH5O43196 834 aa30.63■■■□□ 2.49
HMG20B-207ENST00000461099 CDCA8Q53HL2 280 aa30.63■■■□□ 2.49
HMG20B-207ENST00000461099 COL23A1Q86Y22 540 aaPredicted RBP30.62■■■□□ 2.49
HMG20B-207ENST00000461099 NLGN2Q8NFZ4 835 aa30.62■■■□□ 2.49
HMG20B-207ENST00000461099 PELP1Q8IZL8 1130 aaKnown RBP30.61■■■□□ 2.49
HMG20B-207ENST00000461099 PCDH11XQ9BZA7 1347 aa30.61■■■□□ 2.49
HMG20B-207ENST00000461099 PCDH11YQ9BZA8 1340 aa30.61■■■□□ 2.49
HMG20B-207ENST00000461099 FLT4P35916 1363 aa30.61■■■□□ 2.49
HMG20B-207ENST00000461099 KIF24Q5T7B8 1368 aa30.61■■■□□ 2.49
HMG20B-207ENST00000461099 HMGB2P26583 209 aaKnown RBP30.58■■■□□ 2.49
HMG20B-207ENST00000461099 KIF20BQ96Q89 1820 aa30.58■■■□□ 2.49
HMG20B-207ENST00000461099 C1QTNF8P60827 252 aa30.56■■■□□ 2.48
HMG20B-207ENST00000461099 CARD14Q9BXL6 1004 aa30.56■■■□□ 2.48
HMG20B-207ENST00000461099 CYP27B1O15528 508 aa30.55■■■□□ 2.48
HMG20B-207ENST00000461099 MPRIPQ6WCQ1 1025 aa30.55■■■□□ 2.48
HMG20B-207ENST00000461099 PALLDQ8WX93 1383 aa30.54■■■□□ 2.48
HMG20B-207ENST00000461099 C5P01031 1676 aa30.53■■■□□ 2.48
HMG20B-207ENST00000461099 MSL1Q68DK7 614 aa30.53■■■□□ 2.48
HMG20B-207ENST00000461099 FLAD1Q8NFF5 587 aa30.52■■■□□ 2.48
HMG20B-207ENST00000461099 EMILIN1Q9Y6C2 1016 aa30.52■■■□□ 2.48
HMG20B-207ENST00000461099 GRIN3BO60391 1043 aa30.5■■■□□ 2.47
HMG20B-207ENST00000461099 YBX3P16989 372 aaKnown RBP eCLIP30.49■■■□□ 2.47
HMG20B-207ENST00000461099 SMARCC1Q92922 1105 aaPredicted RBP30.49■■■□□ 2.47
HMG20B-207ENST00000461099 NSD3Q9BZ95 1437 aa30.48■■■□□ 2.47
HMG20B-207ENST00000461099 TAF1LQ8IZX4 1826 aa30.48■■■□□ 2.47
HMG20B-207ENST00000461099 SENP3-EIF4A1A0A087X0R7 540 aa30.48■■■□□ 2.47
HMG20B-207ENST00000461099 PPM1GO15355 546 aaPredicted RBP30.47■■■□□ 2.47
HMG20B-207ENST00000461099 ITGB4P16144 1822 aa30.46■■■□□ 2.47
HMG20B-207ENST00000461099 TOGARAM1Q9Y4F4 1720 aa30.45■■■□□ 2.47
HMG20B-207ENST00000461099 TRIM26Q12899 539 aaPredicted RBP30.45■■■□□ 2.47
HMG20B-207ENST00000461099 NKX1-1Q15270 411 aaPredicted RBP30.45■■■□□ 2.47
HMG20B-207ENST00000461099 PIGBQ92521 554 aa30.45■■■□□ 2.47
HMG20B-207ENST00000461099 CD2APQ9Y5K6 639 aa30.45■■■□□ 2.47
HMG20B-207ENST00000461099 NCAPD2Q15021 1401 aa30.45■■■□□ 2.46
HMG20B-207ENST00000461099 PKD1L3Q7Z443 1732 aa30.44■■■□□ 2.46
HMG20B-207ENST00000461099 GIGYF1O75420 1035 aaPredicted RBP30.44■■■□□ 2.46
HMG20B-207ENST00000461099 SPG7Q9UQ90 795 aa30.44■■■□□ 2.46
HMG20B-207ENST00000461099 AK7Q96M32 723 aa30.43■■■□□ 2.46
HMG20B-207ENST00000461099 WASHC2AQ641Q2 1341 aa30.43■■■□□ 2.46
HMG20B-207ENST00000461099 C4BP0C0L5 1744 aa30.42■■■□□ 2.46
HMG20B-207ENST00000461099 AMIGO3Q86WK7 504 aa30.4■■■□□ 2.46
HMG20B-207ENST00000461099 EYA1Q99502 592 aa30.4■■■□□ 2.46
HMG20B-207ENST00000461099 ANKRD26Q9UPS8 1709 aa30.39■■■□□ 2.46
HMG20B-207ENST00000461099 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.39■■■□□ 2.46
HMG20B-207ENST00000461099 MAP2P11137 1827 aaKnown RBP30.37■■■□□ 2.45
HMG20B-207ENST00000461099 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.36■■■□□ 2.45
HMG20B-207ENST00000461099 LOC102724428A0A0B4J2F2 783 aa30.36■■■□□ 2.45
HMG20B-207ENST00000461099 PHF14O94880 888 aa30.36■■■□□ 2.45
HMG20B-207ENST00000461099 SIK1P57059 783 aa30.36■■■□□ 2.45
HMG20B-207ENST00000461099 POLKQ9UBT6 870 aa30.36■■■□□ 2.45
HMG20B-207ENST00000461099 TIMELESSQ9UNS1 1208 aa30.36■■■□□ 2.45
HMG20B-207ENST00000461099 SMIM5Q71RC9 77 aa30.35■■■□□ 2.45
HMG20B-207ENST00000461099 TMOD3Q9NYL9 352 aa30.35■■■□□ 2.45
HMG20B-207ENST00000461099 UBR3Q6ZT12 1888 aa30.35■■■□□ 2.45
HMG20B-207ENST00000461099 SSFA2P28290 1259 aa30.33■■■□□ 2.45
HMG20B-207ENST00000461099 IFNL2Q8IZJ0 200 aa30.33■■■□□ 2.45
HMG20B-207ENST00000461099 LINC00116Q8NCU8 138 aa30.33■■■□□ 2.45
HMG20B-207ENST00000461099 ASAP1Q9ULH1 1129 aa30.33■■■□□ 2.45
HMG20B-207ENST00000461099 PHKG2P15735 406 aa30.31■■■□□ 2.44
HMG20B-207ENST00000461099 ITPK1Q13572 414 aa30.28■■■□□ 2.44
HMG20B-207ENST00000461099 EIF4A2Q14240 407 aaKnown RBP30.28■■■□□ 2.44
HMG20B-207ENST00000461099 ATP6V1AP38606 617 aa30.27■■■□□ 2.44
HMG20B-207ENST00000461099 TNNT2P45379 298 aaPredicted RBP30.27■■■□□ 2.44
HMG20B-207ENST00000461099 POLR3GLQ9BT43 218 aa30.27■■■□□ 2.44
HMG20B-207ENST00000461099 ATP10DQ9P241 1426 aa30.27■■■□□ 2.44
HMG20B-207ENST00000461099 GNPATO15228 680 aa30.26■■■□□ 2.43
HMG20B-207ENST00000461099 ATG3Q9NT62 314 aa30.26■■■□□ 2.43
HMG20B-207ENST00000461099 IGSF1Q8N6C5 1336 aa30.25■■■□□ 2.43
HMG20B-207ENST00000461099 CEP350Q5VT06 3117 aa30.25■■■□□ 2.43
HMG20B-207ENST00000461099 PLEKHG2Q9H7P9 1386 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms