RNA–Protein interactions for RNA: ENST00000460992.1

PTPN18-206, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 398 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-206ENST00000460992 KNSTRNQ9Y448 316 aa10.25□□□□□ -0.77
PTPN18-206ENST00000460992 NCAPD2Q15021 1401 aa10.24□□□□□ -0.77
PTPN18-206ENST00000460992 TOGARAM1Q9Y4F4 1720 aa10.24□□□□□ -0.77
PTPN18-206ENST00000460992 CNGB1Q14028 1251 aaPredicted RBP10.24□□□□□ -0.77
PTPN18-206ENST00000460992 CC2D1BQ5T0F9 858 aaKnown RBP10.24□□□□□ -0.77
PTPN18-206ENST00000460992 PNISRQ8TF01 805 aaKnown RBP10.24□□□□□ -0.77
PTPN18-206ENST00000460992 IP6K1Q92551 441 aa10.24□□□□□ -0.77
PTPN18-206ENST00000460992 FOXD4L1Q9NU39 408 aa10.24□□□□□ -0.77
PTPN18-206ENST00000460992 NPC1L1Q9UHC9 1359 aa10.24□□□□□ -0.77
PTPN18-206ENST00000460992 PER1O15534 1290 aaPredicted RBP10.23□□□□□ -0.77
PTPN18-206ENST00000460992 HSP90AB2PQ58FF8 381 aa10.23□□□□□ -0.77
PTPN18-206ENST00000460992 BARGINQ6ZT62 677 aa10.23□□□□□ -0.77
PTPN18-206ENST00000460992 OVOS2A0A0G2JMS6 1433 aa10.23□□□□□ -0.77
PTPN18-206ENST00000460992 RREB1Q92766 1687 aa10.22□□□□□ -0.77
PTPN18-206ENST00000460992 RGPD3A6NKT7 1758 aaPredicted RBP10.22□□□□□ -0.77
PTPN18-206ENST00000460992 RGPD4Q7Z3J3 1758 aa10.22□□□□□ -0.77
PTPN18-206ENST00000460992 PPM1GO15355 546 aaPredicted RBP10.22□□□□□ -0.77
PTPN18-206ENST00000460992 MORC1Q86VD1 984 aa10.22□□□□□ -0.77
PTPN18-206ENST00000460992 CARD10Q9BWT7 1032 aa10.22□□□□□ -0.77
PTPN18-206ENST00000460992 NLRP2Q9NX02 1062 aa10.22□□□□□ -0.77
PTPN18-206ENST00000460992 CCDC184Q52MB2 194 aa10.21□□□□□ -0.77
PTPN18-206ENST00000460992 FAM182BQ5T319 152 aa10.21□□□□□ -0.77
PTPN18-206ENST00000460992 KRT27Q7Z3Y8 459 aa10.21□□□□□ -0.77
PTPN18-206ENST00000460992 USHBP1Q8N6Y0 703 aa10.21□□□□□ -0.77
PTPN18-206ENST00000460992 POLKQ9UBT6 870 aa10.21□□□□□ -0.77
PTPN18-206ENST00000460992 THRAP3Q9Y2W1 955 aaKnown RBP10.21□□□□□ -0.77
PTPN18-206ENST00000460992 NUP188Q5SRE5 1749 aa10.21□□□□□ -0.78
PTPN18-206ENST00000460992 BTAF1O14981 1849 aa10.21□□□□□ -0.78
PTPN18-206ENST00000460992 VIRMAQ69YN4 1812 aaKnown RBP10.21□□□□□ -0.78
PTPN18-206ENST00000460992 ONECUT3O60422 494 aaPredicted RBP10.2□□□□□ -0.78
PTPN18-206ENST00000460992 PARD3Q8TEW0 1356 aa10.2□□□□□ -0.78
PTPN18-206ENST00000460992 HOXD11P31277 338 aaPredicted RBP10.19□□□□□ -0.78
PTPN18-206ENST00000460992 EIF4A2Q14240 407 aaKnown RBP10.18□□□□□ -0.78
PTPN18-206ENST00000460992 DDB1Q16531 1140 aa10.18□□□□□ -0.78
PTPN18-206ENST00000460992 UPF1Q92900 1129 aaKnown RBP eCLIP10.18□□□□□ -0.78
PTPN18-206ENST00000460992 CCDC136Q96JN2 1154 aa10.18□□□□□ -0.78
PTPN18-206ENST00000460992 IL2RBP14784 551 aa10.17□□□□□ -0.78
PTPN18-206ENST00000460992 NBPF6Q5VWK0 638 aa10.17□□□□□ -0.78
PTPN18-206ENST00000460992 NBPF4Q96M43 638 aa10.17□□□□□ -0.78
PTPN18-206ENST00000460992 ITGB4P16144 1822 aa10.17□□□□□ -0.78
PTPN18-206ENST00000460992 IGSF1Q8N6C5 1336 aa10.16□□□□□ -0.78
PTPN18-206ENST00000460992 ZBTB22O15209 634 aa10.16□□□□□ -0.78
PTPN18-206ENST00000460992 CDCA7Q9BWT1 371 aaPredicted RBP10.16□□□□□ -0.78
PTPN18-206ENST00000460992 ANP32AP39687 249 aaKnown RBP10.15□□□□□ -0.78
PTPN18-206ENST00000460992 NGEFQ8N5V2 710 aa10.15□□□□□ -0.78
PTPN18-206ENST00000460992 BCL9O00512 1426 aa10.15□□□□□ -0.79
PTPN18-206ENST00000460992 KDRP35968 1356 aa10.14□□□□□ -0.79
PTPN18-206ENST00000460992 TCERG1O14776 1098 aaKnown RBP10.14□□□□□ -0.79
PTPN18-206ENST00000460992 MS4A1P11836 297 aa10.14□□□□□ -0.79
PTPN18-206ENST00000460992 MTHFSP49914 203 aa10.14□□□□□ -0.79
PTPN18-206ENST00000460992 AEBP1Q8IUX7 1158 aa10.14□□□□□ -0.79
PTPN18-206ENST00000460992 MARCH10Q8NA82 808 aaPredicted RBP10.14□□□□□ -0.79
PTPN18-206ENST00000460992 EYA1Q99502 592 aa10.14□□□□□ -0.79
PTPN18-206ENST00000460992 PAPPAQ13219 1627 aa10.14□□□□□ -0.79
PTPN18-206ENST00000460992 LY75O60449 1722 aa10.13□□□□□ -0.79
PTPN18-206ENST00000460992 KAT6BQ8WYB5 2073 aa10.13□□□□□ -0.79
PTPN18-206ENST00000460992 IRX6P78412 446 aaPredicted RBP10.13□□□□□ -0.79
PTPN18-206ENST00000460992 B4GALNT3Q6L9W6 998 aa10.13□□□□□ -0.79
PTPN18-206ENST00000460992 RAPGEF4Q8WZA2 1011 aa10.13□□□□□ -0.79
PTPN18-206ENST00000460992 SCN11AQ9UI33 1791 aa10.13□□□□□ -0.79
PTPN18-206ENST00000460992 ADAMTS7Q9UKP4 1686 aa10.12□□□□□ -0.79
PTPN18-206ENST00000460992 PCDH11XQ9BZA7 1347 aa10.12□□□□□ -0.79
PTPN18-206ENST00000460992 PCDH11YQ9BZA8 1340 aa10.12□□□□□ -0.79
PTPN18-206ENST00000460992 PPP2R1AP30153 589 aa10.12□□□□□ -0.79
PTPN18-206ENST00000460992 DEFB132Q7Z7B7 95 aa10.12□□□□□ -0.79
PTPN18-206ENST00000460992 TUBGCP6Q96RT7 1819 aa10.12□□□□□ -0.79
PTPN18-206ENST00000460992 TRIM37O94972 964 aa10.11□□□□□ -0.79
PTPN18-206ENST00000460992 TATP17735 454 aaPredicted RBP10.11□□□□□ -0.79
PTPN18-206ENST00000460992 IL13P35225 146 aa10.11□□□□□ -0.79
PTPN18-206ENST00000460992 RRP1P56182 461 aaKnown RBP10.11□□□□□ -0.79
PTPN18-206ENST00000460992 FAM196AQ6ZSG2 479 aa10.11□□□□□ -0.79
PTPN18-206ENST00000460992 RCAN3Q9UKA8 241 aa10.11□□□□□ -0.79
PTPN18-206ENST00000460992 PLEKHG2Q9H7P9 1386 aa10.11□□□□□ -0.79
PTPN18-206ENST00000460992 KDM6AO15550 1401 aaPredicted RBP10.1□□□□□ -0.79
PTPN18-206ENST00000460992 C5P01031 1676 aa10.1□□□□□ -0.79
PTPN18-206ENST00000460992 DLG5Q8TDM6 1919 aa10.1□□□□□ -0.79
PTPN18-206ENST00000460992 EXOC5O00471 708 aa10.1□□□□□ -0.79
PTPN18-206ENST00000460992 PTF1AQ7RTS3 328 aa10.1□□□□□ -0.79
PTPN18-206ENST00000460992 NOP58Q9Y2X3 529 aaKnown RBP10.1□□□□□ -0.79
PTPN18-206ENST00000460992 MRC1P22897 1456 aa10.1□□□□□ -0.79
PTPN18-206ENST00000460992 SIPA1L3O60292 1781 aaPredicted RBP10.09□□□□□ -0.79
PTPN18-206ENST00000460992 DIAPH1O60610 1272 aaKnown RBP10.09□□□□□ -0.79
PTPN18-206ENST00000460992 SF3B2Q13435 895 aaKnown RBP10.09□□□□□ -0.79
PTPN18-206ENST00000460992 SULT6B1Q6IMI4 303 aa10.09□□□□□ -0.79
PTPN18-206ENST00000460992 DDX54Q8TDD1 881 aaKnown RBP10.09□□□□□ -0.79
PTPN18-206ENST00000460992 ACSBG1Q96GR2 724 aa10.09□□□□□ -0.79
PTPN18-206ENST00000460992 IPO9Q96P70 1041 aaKnown RBP10.09□□□□□ -0.79
PTPN18-206ENST00000460992 TAF1LQ8IZX4 1826 aa10.08□□□□□ -0.8
PTPN18-206ENST00000460992 HMOX1P09601 288 aa10.08□□□□□ -0.8
PTPN18-206ENST00000460992 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.08□□□□□ -0.8
PTPN18-206ENST00000460992 ZCRB1Q8TBF4 217 aaKnown RBP10.08□□□□□ -0.8
PTPN18-206ENST00000460992 U2SURPO15042 1029 aaKnown RBP10.07□□□□□ -0.8
PTPN18-206ENST00000460992 CYP27B1O15528 508 aa10.07□□□□□ -0.8
PTPN18-206ENST00000460992 BAG6P46379 1132 aa10.07□□□□□ -0.8
PTPN18-206ENST00000460992 CFAP53Q96M91 514 aa10.07□□□□□ -0.8
PTPN18-206ENST00000460992 CASZ1Q86V15 1759 aa10.06□□□□□ -0.8
PTPN18-206ENST00000460992 KCNQ2O43526 872 aa10.06□□□□□ -0.8
PTPN18-206ENST00000460992 EN1Q05925 392 aaPredicted RBP10.06□□□□□ -0.8
PTPN18-206ENST00000460992 COL5A3P25940 1745 aaPredicted RBP10.06□□□□□ -0.8
PTPN18-206ENST00000460992 UBR2Q8IWV8 1755 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms