RNA–Protein interactions for RNA: ENST00000460677.5

PCYT1A-212, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-212ENST00000460677 MAP3K5Q99683 1374 aa20.56■□□□□ 0.88
PCYT1A-212ENST00000460677 GNAT3A8MTJ3 354 aa20.56■□□□□ 0.88
PCYT1A-212ENST00000460677 RRP1P56182 461 aaKnown RBP20.56■□□□□ 0.88
PCYT1A-212ENST00000460677 MCM10Q7L590 875 aa20.56■□□□□ 0.88
PCYT1A-212ENST00000460677 CFAP44Q96MT7 982 aa20.56■□□□□ 0.88
PCYT1A-212ENST00000460677 LAS1LQ9Y4W2 734 aaKnown RBP20.55■□□□□ 0.88
PCYT1A-212ENST00000460677 PLEKHG2Q9H7P9 1386 aa20.54■□□□□ 0.88
PCYT1A-212ENST00000460677 CT47B1P0C2W7 299 aaPredicted RBP20.54■□□□□ 0.88
PCYT1A-212ENST00000460677 RAPGEF4Q8WZA2 1011 aa20.54■□□□□ 0.88
PCYT1A-212ENST00000460677 COL14A1Q05707 1796 aaKnown RBP20.53■□□□□ 0.88
PCYT1A-212ENST00000460677 EXOSC9Q06265 439 aaKnown RBP20.53■□□□□ 0.88
PCYT1A-212ENST00000460677 CRB1P82279 1406 aa20.53■□□□□ 0.88
PCYT1A-212ENST00000460677 TATP17735 454 aaPredicted RBP20.52■□□□□ 0.88
PCYT1A-212ENST00000460677 IRX6P78412 446 aaPredicted RBP20.52■□□□□ 0.88
PCYT1A-212ENST00000460677 TOM1L2Q6ZVM7 507 aa20.52■□□□□ 0.88
PCYT1A-212ENST00000460677 EVA1CP58658 441 aa20.51■□□□□ 0.87
PCYT1A-212ENST00000460677 AKAP4Q5JQC9 854 aa20.51■□□□□ 0.87
PCYT1A-212ENST00000460677 ERICH6BQ5W0A0 696 aa20.51■□□□□ 0.87
PCYT1A-212ENST00000460677 ZNF530Q6P9A1 599 aaPredicted RBP20.51■□□□□ 0.87
PCYT1A-212ENST00000460677 MBIPQ9NS73 344 aa20.51■□□□□ 0.87
PCYT1A-212ENST00000460677 LRRC37A3O60309 1634 aa20.5■□□□□ 0.87
PCYT1A-212ENST00000460677 CHL1O00533 1208 aa20.49■□□□□ 0.87
PCYT1A-212ENST00000460677 IL17REQ8NFR9 667 aa20.49■□□□□ 0.87
PCYT1A-212ENST00000460677 CARD10Q9BWT7 1032 aa20.49■□□□□ 0.87
PCYT1A-212ENST00000460677 STRN4Q9NRL3 753 aa20.49■□□□□ 0.87
PCYT1A-212ENST00000460677 BTG4Q9NY30 223 aa20.49■□□□□ 0.87
PCYT1A-212ENST00000460677 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.49■□□□□ 0.874e-7■□□□□ 10.5
PCYT1A-212ENST00000460677 MEGF6O75095 1541 aa20.49■□□□□ 0.87
PCYT1A-212ENST00000460677 RARSP54136 660 aaKnown RBP20.48■□□□□ 0.87
PCYT1A-212ENST00000460677 C1orf141Q5JVX7 400 aa20.48■□□□□ 0.87
PCYT1A-212ENST00000460677 LARP1Q6PKG0 1096 aaKnown RBP20.48■□□□□ 0.87
PCYT1A-212ENST00000460677 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.47■□□□□ 0.87
PCYT1A-212ENST00000460677 SPG7Q9UQ90 795 aa20.47■□□□□ 0.87
PCYT1A-212ENST00000460677 JCADQ9P266 1359 aa20.47■□□□□ 0.87
PCYT1A-212ENST00000460677 BCAR3O75815 825 aa20.46■□□□□ 0.87
PCYT1A-212ENST00000460677 CEMIPQ8WUJ3 1361 aa20.46■□□□□ 0.87
PCYT1A-212ENST00000460677 NUTM2BA6NNL0 878 aaPredicted RBP20.45■□□□□ 0.86
PCYT1A-212ENST00000460677 NUTM2EB1AL46 878 aaPredicted RBP20.45■□□□□ 0.86
PCYT1A-212ENST00000460677 PLIN1O60240 522 aa20.45■□□□□ 0.86
PCYT1A-212ENST00000460677 ADAMTS2O95450 1211 aa20.45■□□□□ 0.86
PCYT1A-212ENST00000460677 NUTM2AQ8IVF1 878 aaPredicted RBP20.45■□□□□ 0.86
PCYT1A-212ENST00000460677 BABAM1Q9NWV8 329 aa20.45■□□□□ 0.86
PCYT1A-212ENST00000460677 OVOS2A0A0G2JMS6 1433 aa20.44■□□□□ 0.86
PCYT1A-212ENST00000460677 ZNF428Q96B54 188 aa20.44■□□□□ 0.86
PCYT1A-212ENST00000460677 PKD1L3Q7Z443 1732 aa20.43■□□□□ 0.86
PCYT1A-212ENST00000460677 PARP4Q9UKK3 1724 aaKnown RBP20.43■□□□□ 0.86
PCYT1A-212ENST00000460677 TAF7Q15545 349 aaPredicted RBP20.43■□□□□ 0.86
PCYT1A-212ENST00000460677 LGR6Q9HBX8 967 aa20.43■□□□□ 0.86
PCYT1A-212ENST00000460677 TSPYL4Q9UJ04 414 aa20.43■□□□□ 0.86
PCYT1A-212ENST00000460677 PLCH1Q4KWH8 1693 aa20.42■□□□□ 0.86
PCYT1A-212ENST00000460677 RNMTO43148 476 aaKnown RBP20.42■□□□□ 0.86
PCYT1A-212ENST00000460677 IL2RBP14784 551 aa20.42■□□□□ 0.86
PCYT1A-212ENST00000460677 MPRIPQ6WCQ1 1025 aa20.42■□□□□ 0.86
PCYT1A-212ENST00000460677 VAMP4O75379 141 aa20.41■□□□□ 0.86
PCYT1A-212ENST00000460677 PHKG2P15735 406 aa20.41■□□□□ 0.86
PCYT1A-212ENST00000460677 IFNL2Q8IZJ0 200 aa20.41■□□□□ 0.86
PCYT1A-212ENST00000460677 TSPYL6Q8N831 410 aa20.41■□□□□ 0.86
PCYT1A-212ENST00000460677 C8orf58Q8NAV2 365 aa20.41■□□□□ 0.86
PCYT1A-212ENST00000460677 TWISTNBQ3B726 338 aaPredicted RBP20.4■□□□□ 0.86
PCYT1A-212ENST00000460677 ALDH1L2Q3SY69 923 aa20.4■□□□□ 0.86
PCYT1A-212ENST00000460677 MIS18AQ9NYP9 233 aa20.4■□□□□ 0.86
PCYT1A-212ENST00000460677 ADAMTS7Q9UKP4 1686 aa20.4■□□□□ 0.86
PCYT1A-212ENST00000460677 ZCRB1Q8TBF4 217 aaKnown RBP20.39■□□□□ 0.85
PCYT1A-212ENST00000460677 SPATA31A6Q5VVP1 1343 aa20.39■□□□□ 0.85
PCYT1A-212ENST00000460677 TEFQ10587 303 aa20.38■□□□□ 0.85
PCYT1A-212ENST00000460677 SSH1Q8WYL5 1049 aa20.38■□□□□ 0.85
PCYT1A-212ENST00000460677 BCL2L13Q9BXK5 485 aa20.38■□□□□ 0.85
PCYT1A-212ENST00000460677 SMC4Q9NTJ3 1288 aa20.38■□□□□ 0.85
PCYT1A-212ENST00000460677 NRAPQ86VF7 1730 aa20.38■□□□□ 0.85
PCYT1A-212ENST00000460677 ELL2O00472 640 aaPredicted RBP20.37■□□□□ 0.85
PCYT1A-212ENST00000460677 CYP27B1O15528 508 aa20.37■□□□□ 0.85
PCYT1A-212ENST00000460677 HSP90AB1P08238 724 aaKnown RBP20.37■□□□□ 0.85
PCYT1A-212ENST00000460677 NWD2Q9ULI1 1742 aa20.37■□□□□ 0.85
PCYT1A-212ENST00000460677 SLIT2O94813 1529 aa20.37■□□□□ 0.85
PCYT1A-212ENST00000460677 CANXP27824 592 aaKnown RBP20.36■□□□□ 0.85
PCYT1A-212ENST00000460677 HSPA1LP34931 641 aa20.36■□□□□ 0.85
PCYT1A-212ENST00000460677 PPP4R2Q9NY27 417 aa20.36■□□□□ 0.85
PCYT1A-212ENST00000460677 USP35Q9P2H5 1018 aa20.36■□□□□ 0.85
PCYT1A-212ENST00000460677 PCDH11XQ9BZA7 1347 aa20.36■□□□□ 0.85
PCYT1A-212ENST00000460677 PCDH11YQ9BZA8 1340 aa20.36■□□□□ 0.85
PCYT1A-212ENST00000460677 VIRMAQ69YN4 1812 aaKnown RBP20.35■□□□□ 0.85
PCYT1A-212ENST00000460677 BRPF1P55201 1214 aaPredicted RBP20.35■□□□□ 0.85
PCYT1A-212ENST00000460677 C20orf194Q5TEA3 1177 aa20.35■□□□□ 0.85
PCYT1A-212ENST00000460677 FRAT1Q92837 279 aaPredicted RBP20.35■□□□□ 0.85
PCYT1A-212ENST00000460677 DCAF5Q96JK2 942 aa20.35■□□□□ 0.85
PCYT1A-212ENST00000460677 KDM6AO15550 1401 aaPredicted RBP20.35■□□□□ 0.85
PCYT1A-212ENST00000460677 PDE3AQ14432 1141 aa20.34■□□□□ 0.85
PCYT1A-212ENST00000460677 KRT24Q2M2I5 525 aa20.34■□□□□ 0.85
PCYT1A-212ENST00000460677 DISP2A7MBM2 1401 aa20.34■□□□□ 0.85
PCYT1A-212ENST00000460677 EXOC6Q8TAG9 804 aa20.34■□□□□ 0.85
PCYT1A-212ENST00000460677 SCN11AQ9UI33 1791 aa20.34■□□□□ 0.85
PCYT1A-212ENST00000460677 SOS1Q07889 1333 aaPredicted RBP20.33■□□□□ 0.84
PCYT1A-212ENST00000460677 BTBD11A6QL63 1104 aa20.33■□□□□ 0.84
PCYT1A-212ENST00000460677 CRBNQ96SW2 442 aa20.33■□□□□ 0.84
PCYT1A-212ENST00000460677 KDM3BQ7LBC6 1761 aa20.32■□□□□ 0.84
PCYT1A-212ENST00000460677 KIF16BQ96L93 1317 aa20.32■□□□□ 0.84
PCYT1A-212ENST00000460677 NKX1-1Q15270 411 aaPredicted RBP20.32■□□□□ 0.84
PCYT1A-212ENST00000460677 ZKSCAN2Q63HK3 967 aa20.32■□□□□ 0.84
PCYT1A-212ENST00000460677 SLC52A2Q9HAB3 445 aa20.32■□□□□ 0.84
PCYT1A-212ENST00000460677 THRAP3Q9Y2W1 955 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms