RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 NME9Q86XW9 330 aa11.24□□□□□ -0.61
HPS4-207ENST00000459918 SLC16A10Q8TF71 515 aa11.24□□□□□ -0.61
HPS4-207ENST00000459918 SLC27A3Q5K4L6 730 aa11.23□□□□□ -0.61
HPS4-207ENST00000459918 L3MBTL2Q969R5 705 aa11.23□□□□□ -0.61
HPS4-207ENST00000459918 LRRC4BQ9NT99 713 aa11.23□□□□□ -0.61
HPS4-207ENST00000459918 SHANK3Q9BYB0 1731 aa11.23□□□□□ -0.61
HPS4-207ENST00000459918 LY75O60449 1722 aa11.22□□□□□ -0.61
HPS4-207ENST00000459918 KCNQ4P56696 695 aa11.22□□□□□ -0.61
HPS4-207ENST00000459918 NEUROD1Q13562 356 aa11.22□□□□□ -0.61
HPS4-207ENST00000459918 PNPLA7Q6ZV29 1317 aa11.22□□□□□ -0.61
HPS4-207ENST00000459918 NLGN2Q8NFZ4 835 aa11.21□□□□□ -0.61
HPS4-207ENST00000459918 AKT1S1Q96B36 256 aa11.21□□□□□ -0.61
HPS4-207ENST00000459918 RGPD2P0DJD1 1756 aa11.21□□□□□ -0.62
HPS4-207ENST00000459918 COL24A1Q17RW2 1714 aa11.21□□□□□ -0.62
HPS4-207ENST00000459918 CEP350Q5VT06 3117 aa11.2□□□□□ -0.62
HPS4-207ENST00000459918 USP31Q70CQ4 1352 aa11.2□□□□□ -0.62
HPS4-207ENST00000459918 GRIN3BO60391 1043 aa11.2□□□□□ -0.62
HPS4-207ENST00000459918 IFFO2Q5TF58 517 aa11.2□□□□□ -0.62
HPS4-207ENST00000459918 CCNL1Q9UK58 526 aaPredicted RBP11.2□□□□□ -0.62
HPS4-207ENST00000459918 C5P01031 1676 aa11.2□□□□□ -0.62
HPS4-207ENST00000459918 EDC4Q6P2E9 1401 aaKnown RBP11.19□□□□□ -0.62
HPS4-207ENST00000459918 ANKRD36BQ8N2N9 1353 aa11.19□□□□□ -0.62
HPS4-207ENST00000459918 USP47Q96K76 1375 aa11.19□□□□□ -0.62
HPS4-207ENST00000459918 PRIM1P49642 420 aaKnown RBP11.19□□□□□ -0.62
HPS4-207ENST00000459918 TERF2IPQ9NYB0 399 aa11.19□□□□□ -0.62
HPS4-207ENST00000459918 SBNO2Q9Y2G9 1366 aa11.18□□□□□ -0.62
HPS4-207ENST00000459918 AMPHP49418 695 aa11.18□□□□□ -0.62
HPS4-207ENST00000459918 MSL1Q68DK7 614 aa11.18□□□□□ -0.62
HPS4-207ENST00000459918 ZNF526Q8TF50 670 aaPredicted RBP11.18□□□□□ -0.62
HPS4-207ENST00000459918 GPBP1L1Q9HC44 474 aaPredicted RBP11.18□□□□□ -0.62
HPS4-207ENST00000459918 SIN3AQ96ST3 1273 aa11.17□□□□□ -0.62
HPS4-207ENST00000459918 CARD11Q9BXL7 1154 aa11.17□□□□□ -0.62
HPS4-207ENST00000459918 CD163L1Q9NR16 1453 aa11.17□□□□□ -0.62
HPS4-207ENST00000459918 ATP10DQ9P241 1426 aa11.17□□□□□ -0.62
HPS4-207ENST00000459918 A0A1W2PP64 1363 aa11.16□□□□□ -0.62
HPS4-207ENST00000459918 YBX3P16989 372 aaKnown RBP eCLIP11.16□□□□□ -0.62
HPS4-207ENST00000459918 IP6K1Q92551 441 aa11.16□□□□□ -0.62
HPS4-207ENST00000459918 COG3Q96JB2 828 aa11.16□□□□□ -0.62
HPS4-207ENST00000459918 SLC12A5Q9H2X9 1139 aa11.16□□□□□ -0.62
HPS4-207ENST00000459918 SMG6Q86US8 1419 aaKnown RBP11.16□□□□□ -0.62
HPS4-207ENST00000459918 ZCRB1Q8TBF4 217 aaKnown RBP11.15□□□□□ -0.62
HPS4-207ENST00000459918 MEGF6O75095 1541 aa11.14□□□□□ -0.63
HPS4-207ENST00000459918 TAF1LQ8IZX4 1826 aa11.14□□□□□ -0.63
HPS4-207ENST00000459918 COL23A1Q86Y22 540 aaPredicted RBP11.14□□□□□ -0.63
HPS4-207ENST00000459918 RAPGEF4Q8WZA2 1011 aa11.14□□□□□ -0.63
HPS4-207ENST00000459918 WWC3Q9ULE0 1092 aa11.14□□□□□ -0.63
HPS4-207ENST00000459918 HOXC9P31274 260 aa11.13□□□□□ -0.63
HPS4-207ENST00000459918 NSD2O96028 1365 aa11.13□□□□□ -0.63
HPS4-207ENST00000459918 MAP3K19Q56UN5 1328 aa11.12□□□□□ -0.63
HPS4-207ENST00000459918 PHF14O94880 888 aa11.12□□□□□ -0.63
HPS4-207ENST00000459918 HMGB2P26583 209 aaKnown RBP11.12□□□□□ -0.63
HPS4-207ENST00000459918 USHBP1Q8N6Y0 703 aa11.12□□□□□ -0.63
HPS4-207ENST00000459918 AK7Q96M32 723 aa11.12□□□□□ -0.63
HPS4-207ENST00000459918 MPRIPQ6WCQ1 1025 aa11.11□□□□□ -0.63
HPS4-207ENST00000459918 FLAD1Q8NFF5 587 aa11.11□□□□□ -0.63
HPS4-207ENST00000459918 CD2APQ9Y5K6 639 aa11.11□□□□□ -0.63
HPS4-207ENST00000459918 C4BP0C0L5 1744 aa11.11□□□□□ -0.63
HPS4-207ENST00000459918 KIF20BQ96Q89 1820 aa11.11□□□□□ -0.63
HPS4-207ENST00000459918 PCDH11XQ9BZA7 1347 aa11.1□□□□□ -0.63
HPS4-207ENST00000459918 PCDH11YQ9BZA8 1340 aa11.1□□□□□ -0.63
HPS4-207ENST00000459918 ITGB4P16144 1822 aa11.1□□□□□ -0.63
HPS4-207ENST00000459918 HSPA6P17066 643 aa11.1□□□□□ -0.63
HPS4-207ENST00000459918 TATP17735 454 aaPredicted RBP11.1□□□□□ -0.63
HPS4-207ENST00000459918 RTL1A6NKG5 1358 aa11.1□□□□□ -0.63
HPS4-207ENST00000459918 PALLDQ8WX93 1383 aa11.1□□□□□ -0.63
HPS4-207ENST00000459918 TONSLQ96HA7 1378 aa11.1□□□□□ -0.63
HPS4-207ENST00000459918 NSD3Q9BZ95 1437 aa11.09□□□□□ -0.63
HPS4-207ENST00000459918 CGNL1Q0VF96 1302 aa11.09□□□□□ -0.63
HPS4-207ENST00000459918 IGSF1Q8N6C5 1336 aa11.09□□□□□ -0.63
HPS4-207ENST00000459918 ABCB7O75027 752 aa11.08□□□□□ -0.64
HPS4-207ENST00000459918 FBLN1P23142 703 aa11.08□□□□□ -0.64
HPS4-207ENST00000459918 RRS1Q15050 365 aaKnown RBP11.08□□□□□ -0.64
HPS4-207ENST00000459918 UBR3Q6ZT12 1888 aa11.08□□□□□ -0.64
HPS4-207ENST00000459918 TOGARAM1Q9Y4F4 1720 aa11.07□□□□□ -0.64
HPS4-207ENST00000459918 NBPF6Q5VWK0 638 aa11.07□□□□□ -0.64
HPS4-207ENST00000459918 NBPF4Q96M43 638 aa11.07□□□□□ -0.64
HPS4-207ENST00000459918 SMARCC1Q92922 1105 aaPredicted RBP11.06□□□□□ -0.64
HPS4-207ENST00000459918 GGNBP2Q9H3C7 697 aa11.06□□□□□ -0.64
HPS4-207ENST00000459918 ZNF219Q9P2Y4 722 aaPredicted RBP11.06□□□□□ -0.64
HPS4-207ENST00000459918 ADCY9O60503 1353 aa11.05□□□□□ -0.64
HPS4-207ENST00000459918 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.05□□□□□ -0.64
HPS4-207ENST00000459918 PKD1L3Q7Z443 1732 aa11.04□□□□□ -0.64
HPS4-207ENST00000459918 N4BP2Q86UW6 1770 aaPredicted RBP11.04□□□□□ -0.64
HPS4-207ENST00000459918 PPM1GO15355 546 aaPredicted RBP11.04□□□□□ -0.64
HPS4-207ENST00000459918 PUS7Q96PZ0 661 aaKnown RBP11.04□□□□□ -0.64
HPS4-207ENST00000459918 FLT4P35916 1363 aa11.03□□□□□ -0.64
HPS4-207ENST00000459918 ST20-MTHFSA0A0A6YYL1 179 aa11.02□□□□□ -0.65
HPS4-207ENST00000459918 GNPATO15228 680 aa11.02□□□□□ -0.65
HPS4-207ENST00000459918 SLC24A1O60721 1099 aa11.02□□□□□ -0.65
HPS4-207ENST00000459918 HSP90AB2PQ58FF8 381 aa11.02□□□□□ -0.65
HPS4-207ENST00000459918 SMIM5Q71RC9 77 aa11.02□□□□□ -0.65
HPS4-207ENST00000459918 TMOD3Q9NYL9 352 aa11.02□□□□□ -0.65
HPS4-207ENST00000459918 INSRP06213 1382 aa11.02□□□□□ -0.65
HPS4-207ENST00000459918 SSFA2P28290 1259 aa11.01□□□□□ -0.65
HPS4-207ENST00000459918 APLP1P51693 650 aa11.01□□□□□ -0.65
HPS4-207ENST00000459918 TMF1P82094 1093 aa11.01□□□□□ -0.65
HPS4-207ENST00000459918 SAMD1Q6SPF0 538 aaPredicted RBP11.01□□□□□ -0.65
HPS4-207ENST00000459918 C16orf71Q8IYS4 520 aaPredicted RBP11.01□□□□□ -0.65
HPS4-207ENST00000459918 SPG7Q9UQ90 795 aa11.01□□□□□ -0.65
HPS4-207ENST00000459918 BCS1LQ9Y276 419 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms