RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-228	ENST00000459788	MEGF6	O75095	1541 aa		13.8	□□□□□ -0.2
HDLBP-228	ENST00000459788	PAPPA	Q13219	1627 aa		13.79	□□□□□ -0.2
HDLBP-228	ENST00000459788	NBPF6	Q5VWK0	638 aa		13.79	□□□□□ -0.2
HDLBP-228	ENST00000459788	PROM2	Q8N271	834 aa		13.79	□□□□□ -0.2
HDLBP-228	ENST00000459788	RAPGEF4	Q8WZA2	1011 aa		13.79	□□□□□ -0.2
HDLBP-228	ENST00000459788	NBPF4	Q96M43	638 aa		13.79	□□□□□ -0.2
HDLBP-228	ENST00000459788	FBLN1	P23142	703 aa		13.78	□□□□□ -0.2
HDLBP-228	ENST00000459788	HSP90AB2P	Q58FF8	381 aa		13.78	□□□□□ -0.2
HDLBP-228	ENST00000459788	PTF1A	Q7RTS3	328 aa		13.78	□□□□□ -0.2
HDLBP-228	ENST00000459788	KCNQ2	O43526	872 aa		13.77	□□□□□ -0.21
HDLBP-228	ENST00000459788	TAT	P17735	454 aa	Predicted RBP	13.77	□□□□□ -0.21
HDLBP-228	ENST00000459788	SLC27A3	Q5K4L6	730 aa		13.77	□□□□□ -0.21
HDLBP-228	ENST00000459788	SPON1	Q9HCB6	807 aa		13.77	□□□□□ -0.21
HDLBP-228	ENST00000459788	ITGB4	P16144	1822 aa		13.76	□□□□□ -0.21
HDLBP-228	ENST00000459788	PCDH11X	Q9BZA7	1347 aa		13.76	□□□□□ -0.21
HDLBP-228	ENST00000459788	PCDH11Y	Q9BZA8	1340 aa		13.76	□□□□□ -0.21
HDLBP-228	ENST00000459788	STK32B	Q9NY57	414 aa		13.76	□□□□□ -0.21
HDLBP-228	ENST00000459788	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
HDLBP-228	ENST00000459788	SLC15A2	Q16348	729 aa		13.75	□□□□□ -0.21
HDLBP-228	ENST00000459788	DDX54	Q8TDD1	881 aa	Known RBP	13.75	□□□□□ -0.21
HDLBP-228	ENST00000459788	PANK3	Q9H999	370 aa		13.75	□□□□□ -0.21
HDLBP-228	ENST00000459788	POLK	Q9UBT6	870 aa		13.75	□□□□□ -0.21
HDLBP-228	ENST00000459788	EMILIN1	Q9Y6C2	1016 aa		13.75	□□□□□ -0.21
HDLBP-228	ENST00000459788	COL24A1	Q17RW2	1714 aa		13.74	□□□□□ -0.21
HDLBP-228	ENST00000459788	ACSBG1	Q96GR2	724 aa		13.74	□□□□□ -0.21
HDLBP-228	ENST00000459788	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.73	□□□□□ -0.21
HDLBP-228	ENST00000459788	TAF1L	Q8IZX4	1826 aa		13.72	□□□□□ -0.21
HDLBP-228	ENST00000459788	POLR3GL	Q9BT43	218 aa		13.72	□□□□□ -0.21
HDLBP-228	ENST00000459788	KNSTRN	Q9Y448	316 aa		13.72	□□□□□ -0.21
HDLBP-228	ENST00000459788	PRIM1	P49642	420 aa	Known RBP	13.71	□□□□□ -0.21
HDLBP-228	ENST00000459788	NKX1-1	Q15270	411 aa	Predicted RBP	13.71	□□□□□ -0.21
HDLBP-228	ENST00000459788	SPG7	Q9UQ90	795 aa		13.71	□□□□□ -0.21
HDLBP-228	ENST00000459788	TUBGCP6	Q96RT7	1819 aa		13.7	□□□□□ -0.22
HDLBP-228	ENST00000459788	USHBP1	Q8N6Y0	703 aa		13.7	□□□□□ -0.22
HDLBP-228	ENST00000459788	SLC16A10	Q8TF71	515 aa		13.7	□□□□□ -0.22
HDLBP-228	ENST00000459788	EYA1	Q99502	592 aa		13.7	□□□□□ -0.22
HDLBP-228	ENST00000459788	TOGARAM1	Q9Y4F4	1720 aa		13.7	□□□□□ -0.22
HDLBP-228	ENST00000459788	PPM1G	O15355	546 aa	Predicted RBP	13.69	□□□□□ -0.22
HDLBP-228	ENST00000459788	MTFR1L	Q9H019	292 aa		13.69	□□□□□ -0.22
HDLBP-228	ENST00000459788	C5	P01031	1676 aa		13.69	□□□□□ -0.22
HDLBP-228	ENST00000459788	KIF7	Q2M1P5	1343 aa		13.68	□□□□□ -0.22
HDLBP-228	ENST00000459788	IGSF1	Q8N6C5	1336 aa		13.68	□□□□□ -0.22
HDLBP-228	ENST00000459788	CYP27B1	O15528	508 aa		13.68	□□□□□ -0.22
HDLBP-228	ENST00000459788	MORC1	Q86VD1	984 aa		13.68	□□□□□ -0.22
HDLBP-228	ENST00000459788	AKT1S1	Q96B36	256 aa		13.68	□□□□□ -0.22
HDLBP-228	ENST00000459788	LRRC4B	Q9NT99	713 aa		13.68	□□□□□ -0.22
HDLBP-228	ENST00000459788	NPC1L1	Q9UHC9	1359 aa		13.68	□□□□□ -0.22
HDLBP-228	ENST00000459788	ZNF831	Q5JPB2	1677 aa		13.67	□□□□□ -0.22
HDLBP-228	ENST00000459788	EIF4A2	Q14240	407 aa	Known RBP	13.67	□□□□□ -0.22
HDLBP-228	ENST00000459788	SMARCC1	Q92922	1105 aa	Predicted RBP	13.67	□□□□□ -0.22
HDLBP-228	ENST00000459788	SYTL4	Q96C24	671 aa	Predicted RBP	13.67	□□□□□ -0.22
HDLBP-228	ENST00000459788	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.67	□□□□□ -0.22
HDLBP-228	ENST00000459788	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.66	□□□□□ -0.22
HDLBP-228	ENST00000459788	IFNL2	Q8IZJ0	200 aa		13.66	□□□□□ -0.22
HDLBP-228	ENST00000459788	PTGER2	P43116	358 aa		13.65	□□□□□ -0.22
HDLBP-228	ENST00000459788	MAP3K5	Q99683	1374 aa		13.65	□□□□□ -0.22
HDLBP-228	ENST00000459788	PER1	O15534	1290 aa	Predicted RBP	13.64	□□□□□ -0.23
HDLBP-228	ENST00000459788	HSP90AB1	P08238	724 aa	Known RBP	13.64	□□□□□ -0.23
HDLBP-228	ENST00000459788	AMOT	Q4VCS5	1084 aa		13.64	□□□□□ -0.23
HDLBP-228	ENST00000459788	SGIP1	Q9BQI5	828 aa		13.64	□□□□□ -0.23
HDLBP-228	ENST00000459788	CCNL1	Q9UK58	526 aa	Predicted RBP	13.64	□□□□□ -0.23
HDLBP-228	ENST00000459788	KDR	P35968	1356 aa		13.63	□□□□□ -0.23
HDLBP-228	ENST00000459788	DCAF8L1	A6NGE4	600 aa		13.63	□□□□□ -0.23
HDLBP-228	ENST00000459788	TNNT2	P45379	298 aa	Predicted RBP	13.63	□□□□□ -0.23
HDLBP-228	ENST00000459788	ZNF827	Q17R98	1081 aa		13.63	□□□□□ -0.23
HDLBP-228	ENST00000459788	FLAD1	Q8NFF5	587 aa		13.63	□□□□□ -0.23
HDLBP-228	ENST00000459788	VIRMA	Q69YN4	1812 aa	Known RBP	13.62	□□□□□ -0.23
HDLBP-228	ENST00000459788	PALLD	Q8WX93	1383 aa		13.62	□□□□□ -0.23
HDLBP-228	ENST00000459788	UBR3	Q6ZT12	1888 aa		13.62	□□□□□ -0.23
HDLBP-228	ENST00000459788	ERVV-2	B6SEH9	535 aa		13.62	□□□□□ -0.23
HDLBP-228	ENST00000459788	ZBTB7A	O95365	584 aa		13.62	□□□□□ -0.23
HDLBP-228	ENST00000459788	PHKG2	P15735	406 aa		13.62	□□□□□ -0.23
HDLBP-228	ENST00000459788	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.62	□□□□□ -0.23
HDLBP-228	ENST00000459788	C4B	P0C0L5	1744 aa		13.61	□□□□□ -0.23
HDLBP-228	ENST00000459788	SCN11A	Q9UI33	1791 aa		13.61	□□□□□ -0.23
HDLBP-228	ENST00000459788	CHD4	Q14839	1912 aa		13.61	□□□□□ -0.23
HDLBP-228	ENST00000459788	MPRIP	Q6WCQ1	1025 aa		13.61	□□□□□ -0.23
HDLBP-228	ENST00000459788	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.61	□□□□□ -0.23
HDLBP-228	ENST00000459788	TFCP2L1	Q9NZI6	479 aa		13.61	□□□□□ -0.23
HDLBP-228	ENST00000459788	PNPLA7	Q6ZV29	1317 aa		13.61	□□□□□ -0.23
HDLBP-228	ENST00000459788	DCAF5	Q96JK2	942 aa		13.6	□□□□□ -0.23
HDLBP-228	ENST00000459788	TMOD3	Q9NYL9	352 aa		13.6	□□□□□ -0.23
HDLBP-228	ENST00000459788	IL13	P35225	146 aa		13.59	□□□□□ -0.23
HDLBP-228	ENST00000459788	PIGB	Q92521	554 aa		13.59	□□□□□ -0.23
HDLBP-228	ENST00000459788	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.59	□□□□□ -0.23
HDLBP-228	ENST00000459788	CIC	Q96RK0	1608 aa	Predicted RBP	13.58	□□□□□ -0.24
HDLBP-228	ENST00000459788	POLD1	P28340	1107 aa		13.58	□□□□□ -0.24
HDLBP-228	ENST00000459788	ARX	Q96QS3	562 aa		13.58	□□□□□ -0.24
HDLBP-228	ENST00000459788	COL5A3	P25940	1745 aa	Predicted RBP	13.56	□□□□□ -0.24
HDLBP-228	ENST00000459788	LOC102724428	A0A0B4J2F2	783 aa		13.56	□□□□□ -0.24
HDLBP-228	ENST00000459788	MTHFS	P49914	203 aa		13.56	□□□□□ -0.24
HDLBP-228	ENST00000459788	SIK1	P57059	783 aa		13.56	□□□□□ -0.24
HDLBP-228	ENST00000459788	SYT17	Q9BSW7	474 aa		13.56	□□□□□ -0.24
HDLBP-228	ENST00000459788	C1orf141	Q5JVX7	400 aa		13.55	□□□□□ -0.24
HDLBP-228	ENST00000459788	SULT6B1	Q6IMI4	303 aa		13.55	□□□□□ -0.24
HDLBP-228	ENST00000459788	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.55	□□□□□ -0.24
HDLBP-228	ENST00000459788	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.55	□□□□□ -0.24
HDLBP-228	ENST00000459788	ADAMTS7	Q9UKP4	1686 aa		13.55	□□□□□ -0.24
HDLBP-228	ENST00000459788	SSFA2	P28290	1259 aa		13.54	□□□□□ -0.24
HDLBP-228	ENST00000459788	KDM6A	O15550	1401 aa	Predicted RBP	13.54	□□□□□ -0.24

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