RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 MEGF6O75095 1541 aa13.8□□□□□ -0.2
HDLBP-228ENST00000459788 PAPPAQ13219 1627 aa13.79□□□□□ -0.2
HDLBP-228ENST00000459788 NBPF6Q5VWK0 638 aa13.79□□□□□ -0.2
HDLBP-228ENST00000459788 PROM2Q8N271 834 aa13.79□□□□□ -0.2
HDLBP-228ENST00000459788 RAPGEF4Q8WZA2 1011 aa13.79□□□□□ -0.2
HDLBP-228ENST00000459788 NBPF4Q96M43 638 aa13.79□□□□□ -0.2
HDLBP-228ENST00000459788 FBLN1P23142 703 aa13.78□□□□□ -0.2
HDLBP-228ENST00000459788 HSP90AB2PQ58FF8 381 aa13.78□□□□□ -0.2
HDLBP-228ENST00000459788 PTF1AQ7RTS3 328 aa13.78□□□□□ -0.2
HDLBP-228ENST00000459788 KCNQ2O43526 872 aa13.77□□□□□ -0.21
HDLBP-228ENST00000459788 TATP17735 454 aaPredicted RBP13.77□□□□□ -0.21
HDLBP-228ENST00000459788 SLC27A3Q5K4L6 730 aa13.77□□□□□ -0.21
HDLBP-228ENST00000459788 SPON1Q9HCB6 807 aa13.77□□□□□ -0.21
HDLBP-228ENST00000459788 ITGB4P16144 1822 aa13.76□□□□□ -0.21
HDLBP-228ENST00000459788 PCDH11XQ9BZA7 1347 aa13.76□□□□□ -0.21
HDLBP-228ENST00000459788 PCDH11YQ9BZA8 1340 aa13.76□□□□□ -0.21
HDLBP-228ENST00000459788 STK32BQ9NY57 414 aa13.76□□□□□ -0.21
HDLBP-228ENST00000459788 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.76□□□□□ -0.21
HDLBP-228ENST00000459788 SLC15A2Q16348 729 aa13.75□□□□□ -0.21
HDLBP-228ENST00000459788 DDX54Q8TDD1 881 aaKnown RBP13.75□□□□□ -0.21
HDLBP-228ENST00000459788 PANK3Q9H999 370 aa13.75□□□□□ -0.21
HDLBP-228ENST00000459788 POLKQ9UBT6 870 aa13.75□□□□□ -0.21
HDLBP-228ENST00000459788 EMILIN1Q9Y6C2 1016 aa13.75□□□□□ -0.21
HDLBP-228ENST00000459788 COL24A1Q17RW2 1714 aa13.74□□□□□ -0.21
HDLBP-228ENST00000459788 ACSBG1Q96GR2 724 aa13.74□□□□□ -0.21
HDLBP-228ENST00000459788 ANO8Q9HCE9 1232 aaPredicted RBP13.73□□□□□ -0.21
HDLBP-228ENST00000459788 TAF1LQ8IZX4 1826 aa13.72□□□□□ -0.21
HDLBP-228ENST00000459788 POLR3GLQ9BT43 218 aa13.72□□□□□ -0.21
HDLBP-228ENST00000459788 KNSTRNQ9Y448 316 aa13.72□□□□□ -0.21
HDLBP-228ENST00000459788 PRIM1P49642 420 aaKnown RBP13.71□□□□□ -0.21
HDLBP-228ENST00000459788 NKX1-1Q15270 411 aaPredicted RBP13.71□□□□□ -0.21
HDLBP-228ENST00000459788 SPG7Q9UQ90 795 aa13.71□□□□□ -0.21
HDLBP-228ENST00000459788 TUBGCP6Q96RT7 1819 aa13.7□□□□□ -0.22
HDLBP-228ENST00000459788 USHBP1Q8N6Y0 703 aa13.7□□□□□ -0.22
HDLBP-228ENST00000459788 SLC16A10Q8TF71 515 aa13.7□□□□□ -0.22
HDLBP-228ENST00000459788 EYA1Q99502 592 aa13.7□□□□□ -0.22
HDLBP-228ENST00000459788 TOGARAM1Q9Y4F4 1720 aa13.7□□□□□ -0.22
HDLBP-228ENST00000459788 PPM1GO15355 546 aaPredicted RBP13.69□□□□□ -0.22
HDLBP-228ENST00000459788 MTFR1LQ9H019 292 aa13.69□□□□□ -0.22
HDLBP-228ENST00000459788 C5P01031 1676 aa13.69□□□□□ -0.22
HDLBP-228ENST00000459788 KIF7Q2M1P5 1343 aa13.68□□□□□ -0.22
HDLBP-228ENST00000459788 IGSF1Q8N6C5 1336 aa13.68□□□□□ -0.22
HDLBP-228ENST00000459788 CYP27B1O15528 508 aa13.68□□□□□ -0.22
HDLBP-228ENST00000459788 MORC1Q86VD1 984 aa13.68□□□□□ -0.22
HDLBP-228ENST00000459788 AKT1S1Q96B36 256 aa13.68□□□□□ -0.22
HDLBP-228ENST00000459788 LRRC4BQ9NT99 713 aa13.68□□□□□ -0.22
HDLBP-228ENST00000459788 NPC1L1Q9UHC9 1359 aa13.68□□□□□ -0.22
HDLBP-228ENST00000459788 ZNF831Q5JPB2 1677 aa13.67□□□□□ -0.22
HDLBP-228ENST00000459788 EIF4A2Q14240 407 aaKnown RBP13.67□□□□□ -0.22
HDLBP-228ENST00000459788 SMARCC1Q92922 1105 aaPredicted RBP13.67□□□□□ -0.22
HDLBP-228ENST00000459788 SYTL4Q96C24 671 aaPredicted RBP13.67□□□□□ -0.22
HDLBP-228ENST00000459788 PPP1R1BQ9UD71 204 aaPredicted RBP13.67□□□□□ -0.22
HDLBP-228ENST00000459788 AMER1Q5JTC6 1135 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-228ENST00000459788 IFNL2Q8IZJ0 200 aa13.66□□□□□ -0.22
HDLBP-228ENST00000459788 PTGER2P43116 358 aa13.65□□□□□ -0.22
HDLBP-228ENST00000459788 MAP3K5Q99683 1374 aa13.65□□□□□ -0.22
HDLBP-228ENST00000459788 PER1O15534 1290 aaPredicted RBP13.64□□□□□ -0.23
HDLBP-228ENST00000459788 HSP90AB1P08238 724 aaKnown RBP13.64□□□□□ -0.23
HDLBP-228ENST00000459788 AMOTQ4VCS5 1084 aa13.64□□□□□ -0.23
HDLBP-228ENST00000459788 SGIP1Q9BQI5 828 aa13.64□□□□□ -0.23
HDLBP-228ENST00000459788 CCNL1Q9UK58 526 aaPredicted RBP13.64□□□□□ -0.23
HDLBP-228ENST00000459788 KDRP35968 1356 aa13.63□□□□□ -0.23
HDLBP-228ENST00000459788 DCAF8L1A6NGE4 600 aa13.63□□□□□ -0.23
HDLBP-228ENST00000459788 TNNT2P45379 298 aaPredicted RBP13.63□□□□□ -0.23
HDLBP-228ENST00000459788 ZNF827Q17R98 1081 aa13.63□□□□□ -0.23
HDLBP-228ENST00000459788 FLAD1Q8NFF5 587 aa13.63□□□□□ -0.23
HDLBP-228ENST00000459788 VIRMAQ69YN4 1812 aaKnown RBP13.62□□□□□ -0.23
HDLBP-228ENST00000459788 PALLDQ8WX93 1383 aa13.62□□□□□ -0.23
HDLBP-228ENST00000459788 UBR3Q6ZT12 1888 aa13.62□□□□□ -0.23
HDLBP-228ENST00000459788 ERVV-2B6SEH9 535 aa13.62□□□□□ -0.23
HDLBP-228ENST00000459788 ZBTB7AO95365 584 aa13.62□□□□□ -0.23
HDLBP-228ENST00000459788 PHKG2P15735 406 aa13.62□□□□□ -0.23
HDLBP-228ENST00000459788 PLEKHO1Q53GL0 409 aaPredicted RBP13.62□□□□□ -0.23
HDLBP-228ENST00000459788 C4BP0C0L5 1744 aa13.61□□□□□ -0.23
HDLBP-228ENST00000459788 SCN11AQ9UI33 1791 aa13.61□□□□□ -0.23
HDLBP-228ENST00000459788 CHD4Q14839 1912 aa13.61□□□□□ -0.23
HDLBP-228ENST00000459788 MPRIPQ6WCQ1 1025 aa13.61□□□□□ -0.23
HDLBP-228ENST00000459788 PDGFDQ9GZP0 370 aaPredicted RBP13.61□□□□□ -0.23
HDLBP-228ENST00000459788 TFCP2L1Q9NZI6 479 aa13.61□□□□□ -0.23
HDLBP-228ENST00000459788 PNPLA7Q6ZV29 1317 aa13.61□□□□□ -0.23
HDLBP-228ENST00000459788 DCAF5Q96JK2 942 aa13.6□□□□□ -0.23
HDLBP-228ENST00000459788 TMOD3Q9NYL9 352 aa13.6□□□□□ -0.23
HDLBP-228ENST00000459788 IL13P35225 146 aa13.59□□□□□ -0.23
HDLBP-228ENST00000459788 PIGBQ92521 554 aa13.59□□□□□ -0.23
HDLBP-228ENST00000459788 ATF5Q9Y2D1 282 aaPredicted RBP13.59□□□□□ -0.23
HDLBP-228ENST00000459788 CICQ96RK0 1608 aaPredicted RBP13.58□□□□□ -0.24
HDLBP-228ENST00000459788 POLD1P28340 1107 aa13.58□□□□□ -0.24
HDLBP-228ENST00000459788 ARXQ96QS3 562 aa13.58□□□□□ -0.24
HDLBP-228ENST00000459788 COL5A3P25940 1745 aaPredicted RBP13.56□□□□□ -0.24
HDLBP-228ENST00000459788 LOC102724428A0A0B4J2F2 783 aa13.56□□□□□ -0.24
HDLBP-228ENST00000459788 MTHFSP49914 203 aa13.56□□□□□ -0.24
HDLBP-228ENST00000459788 SIK1P57059 783 aa13.56□□□□□ -0.24
HDLBP-228ENST00000459788 SYT17Q9BSW7 474 aa13.56□□□□□ -0.24
HDLBP-228ENST00000459788 C1orf141Q5JVX7 400 aa13.55□□□□□ -0.24
HDLBP-228ENST00000459788 SULT6B1Q6IMI4 303 aa13.55□□□□□ -0.24
HDLBP-228ENST00000459788 ZNF530Q6P9A1 599 aaPredicted RBP13.55□□□□□ -0.24
HDLBP-228ENST00000459788 FHDC1Q9C0D6 1143 aaPredicted RBP13.55□□□□□ -0.24
HDLBP-228ENST00000459788 ADAMTS7Q9UKP4 1686 aa13.55□□□□□ -0.24
HDLBP-228ENST00000459788 SSFA2P28290 1259 aa13.54□□□□□ -0.24
HDLBP-228ENST00000459788 KDM6AO15550 1401 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms