RNA–Protein interactions for RNA: ENST00000458729.5

SEMA3C-205, Transcript of semaphorin 3C, humanhuman

TSL 2

Gene SEMA3C, Length 1,318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-205ENST00000458729 RGPD1P0DJD0 1748 aa34.69■■■■□ 3.14
SEMA3C-205ENST00000458729 PLEKHG2Q9H7P9 1386 aa34.68■■■■□ 3.14
SEMA3C-205ENST00000458729 SULT6B1Q6IMI4 303 aa34.68■■■■□ 3.14
SEMA3C-205ENST00000458729 NUDCQ9Y266 331 aa34.68■■■■□ 3.14
SEMA3C-205ENST00000458729 DDX54Q8TDD1 881 aaKnown RBP34.66■■■■□ 3.14
SEMA3C-205ENST00000458729 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.66■■■■□ 3.14
SEMA3C-205ENST00000458729 KDRP35968 1356 aa34.66■■■■□ 3.14
SEMA3C-205ENST00000458729 BCL9O00512 1426 aa34.65■■■■□ 3.14
SEMA3C-205ENST00000458729 SPG7Q9UQ90 795 aa34.65■■■■□ 3.14
SEMA3C-205ENST00000458729 U2SURPO15042 1029 aaKnown RBP34.64■■■■□ 3.14
SEMA3C-205ENST00000458729 AEBP1Q8IUX7 1158 aa34.64■■■■□ 3.14
SEMA3C-205ENST00000458729 PCDH11XQ9BZA7 1347 aa34.62■■■■□ 3.13
SEMA3C-205ENST00000458729 PCDH11YQ9BZA8 1340 aa34.62■■■■□ 3.13
SEMA3C-205ENST00000458729 HMOX1P09601 288 aa34.59■■■■□ 3.13
SEMA3C-205ENST00000458729 SF3B2Q13435 895 aaKnown RBP34.59■■■■□ 3.13
SEMA3C-205ENST00000458729 AMOTQ4VCS5 1084 aa34.58■■■■□ 3.13
SEMA3C-205ENST00000458729 PLEKHO1Q53GL0 409 aaPredicted RBP34.58■■■■□ 3.13
SEMA3C-205ENST00000458729 ANP32CO43423 234 aa34.57■■■■□ 3.13
SEMA3C-205ENST00000458729 PKD1L3Q7Z443 1732 aa34.57■■■■□ 3.13
SEMA3C-205ENST00000458729 TRIM37O94972 964 aa34.56■■■■□ 3.12
SEMA3C-205ENST00000458729 SHANK3Q9BYB0 1731 aa34.56■■■■□ 3.12
SEMA3C-205ENST00000458729 CYP27B1O15528 508 aa34.54■■■■□ 3.12
SEMA3C-205ENST00000458729 U2AF1L5P0DN76 240 aaPredicted RBP34.54■■■■□ 3.12
SEMA3C-205ENST00000458729 U2AF1Q01081 240 aaKnown RBP eCLIP34.54■■■■□ 3.12
SEMA3C-205ENST00000458729 EP400Q96L91 3159 aa34.53■■■■□ 3.12
SEMA3C-205ENST00000458729 IFNL2Q8IZJ0 200 aa34.52■■■■□ 3.12
SEMA3C-205ENST00000458729 BCL11BQ9C0K0 894 aaPredicted RBP34.51■■■■□ 3.11
SEMA3C-205ENST00000458729 SBF2Q86WG5 1849 aa34.49■■■■□ 3.11
SEMA3C-205ENST00000458729 FCHSD2O94868 740 aa34.48■■■■□ 3.11
SEMA3C-205ENST00000458729 PHKG2P15735 406 aa34.48■■■■□ 3.11
SEMA3C-205ENST00000458729 NKX1-1Q15270 411 aaPredicted RBP34.48■■■■□ 3.11
SEMA3C-205ENST00000458729 BAG6P46379 1132 aa34.47■■■■□ 3.11
SEMA3C-205ENST00000458729 ZNF530Q6P9A1 599 aaPredicted RBP34.47■■■■□ 3.11
SEMA3C-205ENST00000458729 ACSBG1Q96GR2 724 aa34.47■■■■□ 3.11
SEMA3C-205ENST00000458729 RSPH6AQ9H0K4 717 aa34.46■■■■□ 3.11
SEMA3C-205ENST00000458729 APBA3O96018 575 aa34.44■■■■□ 3.1
SEMA3C-205ENST00000458729 HSP90AB1P08238 724 aaKnown RBP34.44■■■■□ 3.1
SEMA3C-205ENST00000458729 C1orf141Q5JVX7 400 aa34.44■■■■□ 3.1
SEMA3C-205ENST00000458729 KCNQ2O43526 872 aa34.43■■■■□ 3.1
SEMA3C-205ENST00000458729 PRKAR2BP31323 418 aa34.43■■■■□ 3.1
SEMA3C-205ENST00000458729 TNS1Q9HBL0 1735 aaKnown RBP34.42■■■■□ 3.1
SEMA3C-205ENST00000458729 KAT6BQ8WYB5 2073 aa34.41■■■■□ 3.1
SEMA3C-205ENST00000458729 NHSQ6T4R5 1651 aa34.41■■■■□ 3.1
SEMA3C-205ENST00000458729 PRIM1P49642 420 aaKnown RBP34.4■■■■□ 3.1
SEMA3C-205ENST00000458729 DEFB132Q7Z7B7 95 aa34.4■■■■□ 3.1
SEMA3C-205ENST00000458729 PNNQ9H307 717 aaKnown RBP34.4■■■■□ 3.1
SEMA3C-205ENST00000458729 MTHFSDQ2M296 383 aaKnown RBP34.39■■■■□ 3.1
SEMA3C-205ENST00000458729 PTF1AQ7RTS3 328 aa34.39■■■■□ 3.1
SEMA3C-205ENST00000458729 AKAP4Q5JQC9 854 aa34.38■■■■□ 3.09
SEMA3C-205ENST00000458729 SYTL4Q96C24 671 aaPredicted RBP34.38■■■■□ 3.09
SEMA3C-205ENST00000458729 GAS2L2Q8NHY3 880 aa34.37■■■■□ 3.09
SEMA3C-205ENST00000458729 DCAF5Q96JK2 942 aa34.37■■■■□ 3.09
SEMA3C-205ENST00000458729 DOT1LQ8TEK3 1739 aa34.36■■■■□ 3.09
SEMA3C-205ENST00000458729 PLSCR1O15162 318 aa34.35■■■■□ 3.09
SEMA3C-205ENST00000458729 NEFMP07197 916 aa34.35■■■■□ 3.09
SEMA3C-205ENST00000458729 EN1Q05925 392 aaPredicted RBP34.35■■■■□ 3.09
SEMA3C-205ENST00000458729 WDR43Q15061 677 aaKnown RBP eCLIP34.35■■■■□ 3.09
SEMA3C-205ENST00000458729 PHACTR3Q96KR7 559 aa34.34■■■■□ 3.09
SEMA3C-205ENST00000458729 CAMKK2Q96RR4 588 aa34.32■■■■□ 3.09
SEMA3C-205ENST00000458729 ERVV-2B6SEH9 535 aa34.3■■■■□ 3.08
SEMA3C-205ENST00000458729 PLEKHF1Q96S99 279 aa34.3■■■■□ 3.08
SEMA3C-205ENST00000458729 EZH2Q15910 746 aaKnown RBP34.29■■■■□ 3.08
SEMA3C-205ENST00000458729 MPRIPQ6WCQ1 1025 aa34.29■■■■□ 3.08
SEMA3C-205ENST00000458729 TOGARAM1Q9Y4F4 1720 aa34.27■■■■□ 3.08
SEMA3C-205ENST00000458729 BTAF1O14981 1849 aa34.27■■■■□ 3.08
SEMA3C-205ENST00000458729 KDM6AO15550 1401 aaPredicted RBP34.27■■■■□ 3.08
SEMA3C-205ENST00000458729 TMOD3Q9NYL9 352 aa34.27■■■■□ 3.08
SEMA3C-205ENST00000458729 GNAT3A8MTJ3 354 aa34.26■■■■□ 3.07
SEMA3C-205ENST00000458729 CCDC184Q52MB2 194 aa34.26■■■■□ 3.07
SEMA3C-205ENST00000458729 MAPK8IP3Q9UPT6 1336 aa34.25■■■■□ 3.07
SEMA3C-205ENST00000458729 MRS2Q9HD23 443 aa34.25■■■■□ 3.07
SEMA3C-205ENST00000458729 ADAMTS8Q9UP79 889 aa34.25■■■■□ 3.07
SEMA3C-205ENST00000458729 MAP3K5Q99683 1374 aa34.25■■■■□ 3.07
SEMA3C-205ENST00000458729 RGPD3A6NKT7 1758 aaPredicted RBP34.24■■■■□ 3.07
SEMA3C-205ENST00000458729 RGPD4Q7Z3J3 1758 aa34.24■■■■□ 3.07
SEMA3C-205ENST00000458729 PIGBQ92521 554 aa34.24■■■■□ 3.07
SEMA3C-205ENST00000458729 ITGB4P16144 1822 aa34.23■■■■□ 3.07
SEMA3C-205ENST00000458729 RNMTO43148 476 aaKnown RBP34.23■■■■□ 3.07
SEMA3C-205ENST00000458729 CABP4P57796 275 aa34.23■■■■□ 3.07
SEMA3C-205ENST00000458729 LGR6Q9HBX8 967 aa34.21■■■■□ 3.07
SEMA3C-205ENST00000458729 DIEXFQ68CQ4 756 aaKnown RBP34.2■■■■□ 3.07
SEMA3C-205ENST00000458729 SMARCC1Q92922 1105 aaPredicted RBP34.19■■■■□ 3.06
SEMA3C-205ENST00000458729 SCN11AQ9UI33 1791 aa34.19■■■■□ 3.06
SEMA3C-205ENST00000458729 TXNRD1Q16881 649 aa34.18■■■■□ 3.06
SEMA3C-205ENST00000458729 RUNDC1Q96C34 613 aa34.18■■■■□ 3.06
SEMA3C-205ENST00000458729 HTATSF1O43719 755 aaKnown RBP34.17■■■■□ 3.06
SEMA3C-205ENST00000458729 NFE2L2Q16236 605 aa34.17■■■■□ 3.06
SEMA3C-205ENST00000458729 PROM2Q8N271 834 aa34.17■■■■□ 3.06
SEMA3C-205ENST00000458729 RTF1Q92541 710 aaKnown RBP34.17■■■■□ 3.06
SEMA3C-205ENST00000458729 NFATC2IPQ8NCF5 419 aa34.16■■■■□ 3.06
SEMA3C-205ENST00000458729 PNISRQ8TF01 805 aaKnown RBP34.16■■■■□ 3.06
SEMA3C-205ENST00000458729 SLC52A2Q9HAB3 445 aa34.16■■■■□ 3.06
SEMA3C-205ENST00000458729 ADAMTS7Q9UKP4 1686 aa34.16■■■■□ 3.06
SEMA3C-205ENST00000458729 IL17REQ8NFR9 667 aa34.15■■■■□ 3.06
SEMA3C-205ENST00000458729 RREB1Q92766 1687 aa34.13■■■■□ 3.05
SEMA3C-205ENST00000458729 SLC27A3Q5K4L6 730 aa34.13■■■■□ 3.05
SEMA3C-205ENST00000458729 CCDC146Q8IYE0 955 aa34.13■■■■□ 3.05
SEMA3C-205ENST00000458729 PALLDQ8WX93 1383 aa34.12■■■■□ 3.05
SEMA3C-205ENST00000458729 ASAP1Q9ULH1 1129 aa34.11■■■■□ 3.05
SEMA3C-205ENST00000458729 MRC1P22897 1456 aa34.11■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms