RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 FCHSD2O94868 740 aa10.58□□□□□ -0.72
VPS50-208ENST00000458707 RICTORQ6R327 1708 aa10.58□□□□□ -0.72
VPS50-208ENST00000458707 YEATS2Q9ULM3 1422 aa10.57□□□□□ -0.72
VPS50-208ENST00000458707 HSP90AB1P08238 724 aaKnown RBP10.57□□□□□ -0.72
VPS50-208ENST00000458707 BRD2P25440 801 aaKnown RBP10.57□□□□□ -0.72
VPS50-208ENST00000458707 CCDC61Q9Y6R9 512 aa10.57□□□□□ -0.72
VPS50-208ENST00000458707 SETD1AO15047 1707 aaKnown RBP10.57□□□□□ -0.72
VPS50-208ENST00000458707 ARHGEF40Q8TER5 1519 aa10.57□□□□□ -0.72
VPS50-208ENST00000458707 K7ELQ4 463 aaPredicted RBP10.57□□□□□ -0.72
VPS50-208ENST00000458707 MAMSTRQ6ZN01 415 aa10.57□□□□□ -0.72
VPS50-208ENST00000458707 GAS2L3Q86XJ1 694 aa10.57□□□□□ -0.72
VPS50-208ENST00000458707 NAP1L5Q96NT1 182 aaPredicted RBP10.57□□□□□ -0.72
VPS50-208ENST00000458707 TUBGCP6Q96RT7 1819 aa10.57□□□□□ -0.72
VPS50-208ENST00000458707 ABCC4O15439 1325 aa10.56□□□□□ -0.72
VPS50-208ENST00000458707 ERBB4Q15303 1308 aa10.56□□□□□ -0.72
VPS50-208ENST00000458707 GGT6Q6P531 493 aa10.56□□□□□ -0.72
VPS50-208ENST00000458707 TBC1D9Q6ZT07 1266 aa10.56□□□□□ -0.72
VPS50-208ENST00000458707 MRPL50Q8N5N7 158 aaKnown RBP10.56□□□□□ -0.72
VPS50-208ENST00000458707 YTHDC2Q9H6S0 1430 aaKnown RBP10.56□□□□□ -0.72
VPS50-208ENST00000458707 KIF24Q5T7B8 1368 aa10.56□□□□□ -0.72
VPS50-208ENST00000458707 POTEMA6NI47 508 aa10.55□□□□□ -0.72
VPS50-208ENST00000458707 VAMP4O75379 141 aa10.55□□□□□ -0.72
VPS50-208ENST00000458707 CD2BP2O95400 341 aaKnown RBP10.55□□□□□ -0.72
VPS50-208ENST00000458707 SRPK2P78362 688 aaKnown RBP10.55□□□□□ -0.72
VPS50-208ENST00000458707 ALKQ9UM73 1620 aa10.55□□□□□ -0.72
VPS50-208ENST00000458707 ATP7BP35670 1465 aa10.55□□□□□ -0.72
VPS50-208ENST00000458707 MON2Q7Z3U7 1717 aa10.55□□□□□ -0.72
VPS50-208ENST00000458707 ANKRD45Q5TZF3 282 aa10.55□□□□□ -0.72
VPS50-208ENST00000458707 DLC1Q96QB1 1528 aa10.55□□□□□ -0.72
VPS50-208ENST00000458707 AKAP12Q02952 1782 aa10.54□□□□□ -0.72
VPS50-208ENST00000458707 CALD1Q05682 793 aaKnown RBP10.54□□□□□ -0.72
VPS50-208ENST00000458707 PPP1R9BQ96SB3 815 aa10.54□□□□□ -0.72
VPS50-208ENST00000458707 NEO1Q92859 1461 aa10.54□□□□□ -0.72
VPS50-208ENST00000458707 CDK12Q9NYV4 1490 aaPredicted RBP10.53□□□□□ -0.72
VPS50-208ENST00000458707 ZNF853P0CG23 659 aa10.53□□□□□ -0.72
VPS50-208ENST00000458707 HSP90AA2PQ14568 343 aaPredicted RBP10.53□□□□□ -0.72
VPS50-208ENST00000458707 NFE2L2Q16236 605 aa10.53□□□□□ -0.72
VPS50-208ENST00000458707 KLHL40Q2TBA0 621 aa10.53□□□□□ -0.72
VPS50-208ENST00000458707 SIRT2Q8IXJ6 389 aa10.53□□□□□ -0.72
VPS50-208ENST00000458707 CFAP44Q96MT7 982 aa10.53□□□□□ -0.72
VPS50-208ENST00000458707 TSPYL2Q9H2G4 693 aaPredicted RBP10.53□□□□□ -0.72
VPS50-208ENST00000458707 SLC52A1Q9NWF4 448 aa10.53□□□□□ -0.72
VPS50-208ENST00000458707 CDC45O75419 566 aa10.53□□□□□ -0.72
VPS50-208ENST00000458707 HSP90AA1P07900 732 aaKnown RBP10.53□□□□□ -0.72
VPS50-208ENST00000458707 CCDC173Q0VFZ6 552 aa10.53□□□□□ -0.72
VPS50-208ENST00000458707 NUTM2DQ5VT03 806 aaPredicted RBP10.53□□□□□ -0.72
VPS50-208ENST00000458707 HDGFL2Q7Z4V5 671 aaPredicted RBP10.53□□□□□ -0.72
VPS50-208ENST00000458707 TRIM44Q96DX7 344 aaPredicted RBP10.53□□□□□ -0.72
VPS50-208ENST00000458707 KIF12Q96FN5 646 aa10.53□□□□□ -0.72
VPS50-208ENST00000458707 IFT57Q9NWB7 429 aa10.53□□□□□ -0.72
VPS50-208ENST00000458707 PRDM4Q9UKN5 801 aa10.53□□□□□ -0.72
VPS50-208ENST00000458707 POTEJP0CG39 1038 aa10.52□□□□□ -0.73
VPS50-208ENST00000458707 PRKAR2BP31323 418 aa10.52□□□□□ -0.73
VPS50-208ENST00000458707 GNAI1P63096 354 aa10.52□□□□□ -0.73
VPS50-208ENST00000458707 IDI1Q13907 227 aa10.52□□□□□ -0.73
VPS50-208ENST00000458707 SAFB2Q14151 953 aaKnown RBP eCLIP10.52□□□□□ -0.73
VPS50-208ENST00000458707 POTEGQ6S5H5 508 aa10.52□□□□□ -0.73
VPS50-208ENST00000458707 GAS2L2Q8NHY3 880 aa10.52□□□□□ -0.73
VPS50-208ENST00000458707 ITSN1Q15811 1721 aa10.51□□□□□ -0.73
VPS50-208ENST00000458707 NRKQ7Z2Y5 1582 aa10.51□□□□□ -0.73
VPS50-208ENST00000458707 GOLGA6L22H0YM25 854 aa10.51□□□□□ -0.73
VPS50-208ENST00000458707 SSFA2P28290 1259 aa10.51□□□□□ -0.73
VPS50-208ENST00000458707 PCDH10Q9P2E7 1040 aa10.51□□□□□ -0.73
VPS50-208ENST00000458707 MINK1Q8N4C8 1332 aaPredicted RBP10.51□□□□□ -0.73
VPS50-208ENST00000458707 BAG4O95429 457 aaKnown RBP10.51□□□□□ -0.73
VPS50-208ENST00000458707 RABEP1Q15276 862 aa10.51□□□□□ -0.73
VPS50-208ENST00000458707 PRAM1Q96QH2 718 aa10.51□□□□□ -0.73
VPS50-208ENST00000458707 POLKQ9UBT6 870 aa10.51□□□□□ -0.73
VPS50-208ENST00000458707 C3P01024 1663 aa10.5□□□□□ -0.73
VPS50-208ENST00000458707 CYP2E1P05181 493 aaPredicted RBP10.5□□□□□ -0.73
VPS50-208ENST00000458707 GSPT1P15170 499 aaKnown RBP10.5□□□□□ -0.73
VPS50-208ENST00000458707 ZNF445P59923 1031 aa10.5□□□□□ -0.73
VPS50-208ENST00000458707 PLEKHM2Q8IWE5 1019 aa10.5□□□□□ -0.73
VPS50-208ENST00000458707 TSPYL6Q8N831 410 aa10.5□□□□□ -0.73
VPS50-208ENST00000458707 C1orf115Q9H7X2 142 aa10.5□□□□□ -0.73
VPS50-208ENST00000458707 STK26Q9P289 416 aa10.5□□□□□ -0.73
VPS50-208ENST00000458707 CPSF1Q10570 1443 aaKnown RBP10.5□□□□□ -0.73
VPS50-208ENST00000458707 TPM2P07951 284 aa10.49□□□□□ -0.73
VPS50-208ENST00000458707 NASPP49321 788 aaPredicted RBP10.49□□□□□ -0.73
VPS50-208ENST00000458707 ATN1P54259 1190 aaPredicted RBP10.49□□□□□ -0.73
VPS50-208ENST00000458707 PHACTR3Q96KR7 559 aa10.49□□□□□ -0.73
VPS50-208ENST00000458707 API5Q9BZZ5 524 aaKnown RBP10.49□□□□□ -0.73
VPS50-208ENST00000458707 DCTPP1Q9H773 170 aa10.49□□□□□ -0.73
VPS50-208ENST00000458707 MBIPQ9NS73 344 aa10.49□□□□□ -0.73
VPS50-208ENST00000458707 NAP1L2Q9ULW6 460 aaPredicted RBP10.49□□□□□ -0.73
VPS50-208ENST00000458707 CACNA1FO60840 1977 aa10.49□□□□□ -0.73
VPS50-208ENST00000458707 NUCB2P80303 420 aa10.49□□□□□ -0.73
VPS50-208ENST00000458707 TTC22Q5TAA0 569 aa10.49□□□□□ -0.73
VPS50-208ENST00000458707 IPO4Q8TEX9 1081 aaKnown RBP10.49□□□□□ -0.73
VPS50-208ENST00000458707 CDK19Q9BWU1 502 aa10.49□□□□□ -0.73
VPS50-208ENST00000458707 ATP10DQ9P241 1426 aa10.48□□□□□ -0.73
VPS50-208ENST00000458707 RIMS2Q9UQ26 1411 aa10.48□□□□□ -0.73
VPS50-208ENST00000458707 N4BP2Q86UW6 1770 aaPredicted RBP10.48□□□□□ -0.73
VPS50-208ENST00000458707 AATKQ6ZMQ8 1374 aa10.48□□□□□ -0.73
VPS50-208ENST00000458707 HS1BP3Q53T59 392 aa10.48□□□□□ -0.73
VPS50-208ENST00000458707 CABP1Q9NZU7 370 aa10.48□□□□□ -0.73
VPS50-208ENST00000458707 DDX49Q9Y6V7 483 aaKnown RBP10.48□□□□□ -0.73
VPS50-208ENST00000458707 IL13P35225 146 aa10.47□□□□□ -0.73
VPS50-208ENST00000458707 LMOD3Q0VAK6 560 aa10.47□□□□□ -0.73
VPS50-208ENST00000458707 TWISTNBQ3B726 338 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 242.3 ms