RNA–Protein interactions for RNA: ENST00000458657.6

C1orf228-218, Transcript of Uncharacterized protein C1orf228, human

APPRIS P2 TSL 5 BASIC

Gene C1orf228, Length 1,818 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf228-218	ENST00000458657	LRRC37A3	O60309	1634 aa		18.97	■□□□□ 0.63
C1orf228-218	ENST00000458657	PLIN1	O60240	522 aa		18.96	■□□□□ 0.63
C1orf228-218	ENST00000458657	GNAT3	A8MTJ3	354 aa		18.95	■□□□□ 0.62
C1orf228-218	ENST00000458657	ZNF853	P0CG23	659 aa		18.95	■□□□□ 0.62
C1orf228-218	ENST00000458657	CERK	Q8TCT0	537 aa		18.95	■□□□□ 0.62
C1orf228-218	ENST00000458657	BCAR3	O75815	825 aa		18.95	■□□□□ 0.62
C1orf228-218	ENST00000458657	CFAP44	Q96MT7	982 aa		18.95	■□□□□ 0.62
C1orf228-218	ENST00000458657	MBIP	Q9NS73	344 aa		18.95	■□□□□ 0.62
C1orf228-218	ENST00000458657	CRB1	P82279	1406 aa		18.94	■□□□□ 0.62
C1orf228-218	ENST00000458657	COL14A1	Q05707	1796 aa	Known RBP	18.94	■□□□□ 0.62
C1orf228-218	ENST00000458657	WDR17	Q8IZU2	1322 aa		18.94	■□□□□ 0.62
C1orf228-218	ENST00000458657	MEGF6	O75095	1541 aa		18.94	■□□□□ 0.62
C1orf228-218	ENST00000458657	PLEKHO1	Q53GL0	409 aa	Predicted RBP	18.93	■□□□□ 0.62
C1orf228-218	ENST00000458657	VIRMA	Q69YN4	1812 aa	Known RBP	18.93	■□□□□ 0.62
C1orf228-218	ENST00000458657	ZNF530	Q6P9A1	599 aa	Predicted RBP	18.93	■□□□□ 0.62
C1orf228-218	ENST00000458657	RAPGEF4	Q8WZA2	1011 aa		18.93	■□□□□ 0.62
C1orf228-218	ENST00000458657	HTATSF1	O43719	755 aa	Known RBP	18.92	■□□□□ 0.62
C1orf228-218	ENST00000458657	AMOT	Q4VCS5	1084 aa		18.92	■□□□□ 0.62
C1orf228-218	ENST00000458657	TOM1L2	Q6ZVM7	507 aa		18.92	■□□□□ 0.62
C1orf228-218	ENST00000458657	STRN4	Q9NRL3	753 aa		18.92	■□□□□ 0.62
C1orf228-218	ENST00000458657	RARS	P54136	660 aa	Known RBP	18.91	■□□□□ 0.62
C1orf228-218	ENST00000458657	BCL2L13	Q9BXK5	485 aa		18.9	■□□□□ 0.62
C1orf228-218	ENST00000458657	IL17RE	Q8NFR9	667 aa		18.9	■□□□□ 0.62
C1orf228-218	ENST00000458657	CT47B1	P0C2W7	299 aa	Predicted RBP	18.89	■□□□□ 0.61
C1orf228-218	ENST00000458657	TAT	P17735	454 aa	Predicted RBP	18.89	■□□□□ 0.61
C1orf228-218	ENST00000458657	EVA1C	P58658	441 aa		18.89	■□□□□ 0.61
C1orf228-218	ENST00000458657	AKAP4	Q5JQC9	854 aa		18.89	■□□□□ 0.61
C1orf228-218	ENST00000458657	LARP1	Q6PKG0	1096 aa	Known RBP	18.89	■□□□□ 0.61
C1orf228-218	ENST00000458657	BTG4	Q9NY30	223 aa		18.89	■□□□□ 0.61
C1orf228-218	ENST00000458657	PLCH1	Q4KWH8	1693 aa		18.89	■□□□□ 0.61
C1orf228-218	ENST00000458657	PKD1L3	Q7Z443	1732 aa		18.89	■□□□□ 0.61
C1orf228-218	ENST00000458657	PARP4	Q9UKK3	1724 aa	Known RBP	18.89	■□□□□ 0.61
C1orf228-218	ENST00000458657	CHL1	O00533	1208 aa		18.88	■□□□□ 0.61
C1orf228-218	ENST00000458657	C1orf141	Q5JVX7	400 aa		18.88	■□□□□ 0.61
C1orf228-218	ENST00000458657	C20orf194	Q5TEA3	1177 aa		18.88	■□□□□ 0.61
C1orf228-218	ENST00000458657	ERICH6B	Q5W0A0	696 aa		18.88	■□□□□ 0.61
C1orf228-218	ENST00000458657	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	18.88	■□□□□ 0.61
C1orf228-218	ENST00000458657	MIS18A	Q9NYP9	233 aa		18.88	■□□□□ 0.61
C1orf228-218	ENST00000458657	NUTM2B	A6NNL0	878 aa	Predicted RBP	18.87	■□□□□ 0.61
C1orf228-218	ENST00000458657	NUTM2E	B1AL46	878 aa	Predicted RBP	18.87	■□□□□ 0.61
C1orf228-218	ENST00000458657	ADAMTS2	O95450	1211 aa		18.87	■□□□□ 0.61
C1orf228-218	ENST00000458657	NUTM2A	Q8IVF1	878 aa	Predicted RBP	18.87	■□□□□ 0.61
C1orf228-218	ENST00000458657	TSPYL6	Q8N831	410 aa		18.87	■□□□□ 0.61
C1orf228-218	ENST00000458657	CEMIP	Q8WUJ3	1361 aa		18.86	■□□□□ 0.61
C1orf228-218	ENST00000458657	LGR6	Q9HBX8	967 aa		18.86	■□□□□ 0.61
C1orf228-218	ENST00000458657	ELL2	O00472	640 aa	Predicted RBP	18.86	■□□□□ 0.61
C1orf228-218	ENST00000458657	MPRIP	Q6WCQ1	1025 aa		18.86	■□□□□ 0.61
C1orf228-218	ENST00000458657	C8orf58	Q8NAV2	365 aa		18.86	■□□□□ 0.61
C1orf228-218	ENST00000458657	TSPYL4	Q9UJ04	414 aa		18.86	■□□□□ 0.61
C1orf228-218	ENST00000458657	FRAT1	Q92837	279 aa	Predicted RBP	18.85	■□□□□ 0.61
C1orf228-218	ENST00000458657	CARD10	Q9BWT7	1032 aa		18.85	■□□□□ 0.61
C1orf228-218	ENST00000458657	OVOS2	A0A0G2JMS6	1433 aa		18.85	■□□□□ 0.61
C1orf228-218	ENST00000458657	CANX	P27824	592 aa	Known RBP	18.84	■□□□□ 0.61
C1orf228-218	ENST00000458657	EXOC6	Q8TAG9	804 aa		18.84	■□□□□ 0.61
C1orf228-218	ENST00000458657	SMC4	Q9NTJ3	1288 aa		18.84	■□□□□ 0.61
C1orf228-218	ENST00000458657	SPG7	Q9UQ90	795 aa		18.84	■□□□□ 0.61
C1orf228-218	ENST00000458657	ADAMTS7	Q9UKP4	1686 aa		18.84	■□□□□ 0.61
C1orf228-218	ENST00000458657	KRT24	Q2M2I5	525 aa		18.84	■□□□□ 0.61
C1orf228-218	ENST00000458657	TWISTNB	Q3B726	338 aa	Predicted RBP	18.84	■□□□□ 0.61
C1orf228-218	ENST00000458657	SSH1	Q8WYL5	1049 aa		18.84	■□□□□ 0.61
C1orf228-218	ENST00000458657	USP35	Q9P2H5	1018 aa		18.84	■□□□□ 0.61
C1orf228-218	ENST00000458657	PLEKHG2	Q9H7P9	1386 aa		18.83	■□□□□ 0.61
C1orf228-218	ENST00000458657	VAMP4	O75379	141 aa		18.83	■□□□□ 0.6
C1orf228-218	ENST00000458657	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	18.83	■□□□□ 0.6
C1orf228-218	ENST00000458657	NRAP	Q86VF7	1730 aa		18.83	■□□□□ 0.6
C1orf228-218	ENST00000458657	SCN11A	Q9UI33	1791 aa		18.82	■□□□□ 0.6
C1orf228-218	ENST00000458657	RNMT	O43148	476 aa	Known RBP	18.82	■□□□□ 0.6
C1orf228-218	ENST00000458657	CRBN	Q96SW2	442 aa		18.82	■□□□□ 0.6
C1orf228-218	ENST00000458657	PPP4R2	Q9NY27	417 aa		18.82	■□□□□ 0.6
C1orf228-218	ENST00000458657	TAF7	Q15545	349 aa	Predicted RBP	18.81	■□□□□ 0.6
C1orf228-218	ENST00000458657	JCAD	Q9P266	1359 aa		18.81	■□□□□ 0.6
C1orf228-218	ENST00000458657	SIPA1L3	O60292	1781 aa	Predicted RBP	18.81	■□□□□ 0.6
C1orf228-218	ENST00000458657	KDM3B	Q7LBC6	1761 aa		18.81	■□□□□ 0.6
C1orf228-218	ENST00000458657	PHKG2	P15735	406 aa		18.81	■□□□□ 0.6
C1orf228-218	ENST00000458657	SHANK3	Q9BYB0	1731 aa		18.81	■□□□□ 0.6
C1orf228-218	ENST00000458657	IL2RB	P14784	551 aa		18.8	■□□□□ 0.6
C1orf228-218	ENST00000458657	KDM6A	O15550	1401 aa	Predicted RBP	18.8	■□□□□ 0.6
C1orf228-218	ENST00000458657	CYP27B1	O15528	508 aa		18.79	■□□□□ 0.6
C1orf228-218	ENST00000458657	TEF	Q10587	303 aa		18.79	■□□□□ 0.6
C1orf228-218	ENST00000458657	ALDH1L2	Q3SY69	923 aa		18.79	■□□□□ 0.6
C1orf228-218	ENST00000458657	IFNL2	Q8IZJ0	200 aa		18.79	■□□□□ 0.6
C1orf228-218	ENST00000458657	ZNF428	Q96B54	188 aa		18.79	■□□□□ 0.6
C1orf228-218	ENST00000458657	TCERG1	O14776	1098 aa	Known RBP	18.79	■□□□□ 0.6
C1orf228-218	ENST00000458657	TNN	Q9UQP3	1299 aa		18.79	■□□□□ 0.6
C1orf228-218	ENST00000458657	NWD2	Q9ULI1	1742 aa		18.78	■□□□□ 0.6
C1orf228-218	ENST00000458657	WNK3	Q9BYP7	1800 aa		18.78	■□□□□ 0.6
C1orf228-218	ENST00000458657	B4GALNT3	Q6L9W6	998 aa		18.77	■□□□□ 0.6
C1orf228-218	ENST00000458657	BABAM1	Q9NWV8	329 aa		18.77	■□□□□ 0.6
C1orf228-218	ENST00000458657	ZCRB1	Q8TBF4	217 aa	Known RBP	18.77	■□□□□ 0.59
C1orf228-218	ENST00000458657	PANK1	Q8TE04	598 aa		18.77	■□□□□ 0.59
C1orf228-218	ENST00000458657	PCDH11X	Q9BZA7	1347 aa		18.76	■□□□□ 0.59
C1orf228-218	ENST00000458657	PCDH11Y	Q9BZA8	1340 aa		18.76	■□□□□ 0.59
C1orf228-218	ENST00000458657	ZKSCAN2	Q63HK3	967 aa		18.76	■□□□□ 0.59
C1orf228-218	ENST00000458657	BTBD11	A6QL63	1104 aa		18.75	■□□□□ 0.59
C1orf228-218	ENST00000458657	HSPA1L	P34931	641 aa		18.75	■□□□□ 0.59
C1orf228-218	ENST00000458657	PDE3A	Q14432	1141 aa		18.75	■□□□□ 0.59
C1orf228-218	ENST00000458657	CLUAP1	Q96AJ1	413 aa		18.75	■□□□□ 0.59
C1orf228-218	ENST00000458657	NOB1	Q9ULX3	412 aa	Known RBP	18.75	■□□□□ 0.59
C1orf228-218	ENST00000458657	SLIT2	O94813	1529 aa		18.75	■□□□□ 0.59
C1orf228-218	ENST00000458657	KIF16B	Q96L93	1317 aa		18.75	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms