RNA–Protein interactions for RNA: ENST00000458642.5

HDAC11-216, Transcript of histone deacetylase 11, humanhuman

TSL 5

Gene HDAC11, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-216ENST00000458642 GGNBP2Q9H3C7 697 aa26.09■■□□□ 1.77
HDAC11-216ENST00000458642 FYB1O15117 783 aa26.07■■□□□ 1.76
HDAC11-216ENST00000458642 NBPF6Q5VWK0 638 aa26.07■■□□□ 1.76
HDAC11-216ENST00000458642 NBPF4Q96M43 638 aa26.07■■□□□ 1.76
HDAC11-216ENST00000458642 LY75O60449 1722 aa26.07■■□□□ 1.76
HDAC11-216ENST00000458642 QSER1Q2KHR3 1735 aa26.07■■□□□ 1.76
HDAC11-216ENST00000458642 PNPLA7Q6ZV29 1317 aa26.07■■□□□ 1.76
HDAC11-216ENST00000458642 ZCRB1Q8TBF4 217 aaKnown RBP26.06■■□□□ 1.76
HDAC11-216ENST00000458642 GOLGB1Q14789 3259 aaKnown RBP26.06■■□□□ 1.76
HDAC11-216ENST00000458642 SLC27A3Q5K4L6 730 aa26.05■■□□□ 1.76
HDAC11-216ENST00000458642 USP47Q96K76 1375 aa26.05■■□□□ 1.76
HDAC11-216ENST00000458642 RTL1A6NKG5 1358 aa26.04■■□□□ 1.76
HDAC11-216ENST00000458642 ZNF784Q8NCA9 323 aaPredicted RBP26.03■■□□□ 1.76
HDAC11-216ENST00000458642 COL24A1Q17RW2 1714 aa26.02■■□□□ 1.76
HDAC11-216ENST00000458642 MAP3K5Q99683 1374 aa26.02■■□□□ 1.76
HDAC11-216ENST00000458642 KIF20BQ96Q89 1820 aa26.01■■□□□ 1.75
HDAC11-216ENST00000458642 TFCP2L1Q9NZI6 479 aa26.01■■□□□ 1.75
HDAC11-216ENST00000458642 TMF1P82094 1093 aa26■■□□□ 1.75
HDAC11-216ENST00000458642 KLHL34Q8N239 644 aa26■■□□□ 1.75
HDAC11-216ENST00000458642 HSP90AB2PQ58FF8 381 aa25.99■■□□□ 1.75
HDAC11-216ENST00000458642 CHD4Q14839 1912 aa25.97■■□□□ 1.75
HDAC11-216ENST00000458642 CCNL1Q9UK58 526 aaPredicted RBP25.97■■□□□ 1.75
HDAC11-216ENST00000458642 SLC24A1O60721 1099 aa25.96■■□□□ 1.75
HDAC11-216ENST00000458642 SLC16A10Q8TF71 515 aa25.96■■□□□ 1.75
HDAC11-216ENST00000458642 CARD14Q9BXL6 1004 aa25.95■■□□□ 1.74
HDAC11-216ENST00000458642 SMG6Q86US8 1419 aaKnown RBP25.95■■□□□ 1.74
HDAC11-216ENST00000458642 NLGN2Q8NFZ4 835 aa25.94■■□□□ 1.74
HDAC11-216ENST00000458642 RAPGEF4Q8WZA2 1011 aa25.94■■□□□ 1.74
HDAC11-216ENST00000458642 INSRP06213 1382 aa25.94■■□□□ 1.74
HDAC11-216ENST00000458642 TOGARAM1Q9Y4F4 1720 aa25.93■■□□□ 1.74
HDAC11-216ENST00000458642 POLD1P28340 1107 aa25.92■■□□□ 1.74
HDAC11-216ENST00000458642 GPR162Q16538 588 aa25.92■■□□□ 1.74
HDAC11-216ENST00000458642 EMILIN1Q9Y6C2 1016 aa25.92■■□□□ 1.74
HDAC11-216ENST00000458642 FLT4P35916 1363 aa25.92■■□□□ 1.74
HDAC11-216ENST00000458642 C5P01031 1676 aa25.91■■□□□ 1.74
HDAC11-216ENST00000458642 TATP17735 454 aaPredicted RBP25.91■■□□□ 1.74
HDAC11-216ENST00000458642 COL23A1Q86Y22 540 aaPredicted RBP25.91■■□□□ 1.74
HDAC11-216ENST00000458642 CGNL1Q0VF96 1302 aa25.9■■□□□ 1.74
HDAC11-216ENST00000458642 PELP1Q8IZL8 1130 aaKnown RBP25.9■■□□□ 1.74
HDAC11-216ENST00000458642 NSD3Q9BZ95 1437 aa25.89■■□□□ 1.74
HDAC11-216ENST00000458642 CYP27B1O15528 508 aa25.89■■□□□ 1.74
HDAC11-216ENST00000458642 MSH5O43196 834 aa25.89■■□□□ 1.74
HDAC11-216ENST00000458642 MSL1Q68DK7 614 aa25.89■■□□□ 1.74
HDAC11-216ENST00000458642 PCDH11XQ9BZA7 1347 aa25.88■■□□□ 1.73
HDAC11-216ENST00000458642 PCDH11YQ9BZA8 1340 aa25.88■■□□□ 1.73
HDAC11-216ENST00000458642 TAF1LQ8IZX4 1826 aa25.86■■□□□ 1.73
HDAC11-216ENST00000458642 MPRIPQ6WCQ1 1025 aa25.86■■□□□ 1.73
HDAC11-216ENST00000458642 ITGB4P16144 1822 aa25.86■■□□□ 1.73
HDAC11-216ENST00000458642 PKD1L3Q7Z443 1732 aa25.85■■□□□ 1.73
HDAC11-216ENST00000458642 PALLDQ8WX93 1383 aa25.85■■□□□ 1.73
HDAC11-216ENST00000458642 TRIM26Q12899 539 aaPredicted RBP25.85■■□□□ 1.73
HDAC11-216ENST00000458642 KIF24Q5T7B8 1368 aa25.84■■□□□ 1.73
HDAC11-216ENST00000458642 ANKRD26Q9UPS8 1709 aa25.84■■□□□ 1.73
HDAC11-216ENST00000458642 PPM1GO15355 546 aaPredicted RBP25.83■■□□□ 1.73
HDAC11-216ENST00000458642 CDCA8Q53HL2 280 aa25.83■■□□□ 1.73
HDAC11-216ENST00000458642 AMIGO3Q86WK7 504 aa25.83■■□□□ 1.73
HDAC11-216ENST00000458642 YBX3P16989 372 aaKnown RBP eCLIP25.82■■□□□ 1.72
HDAC11-216ENST00000458642 SMIM5Q71RC9 77 aa25.82■■□□□ 1.72
HDAC11-216ENST00000458642 NCAPD2Q15021 1401 aa25.81■■□□□ 1.72
HDAC11-216ENST00000458642 C4BP0C0L5 1744 aa25.8■■□□□ 1.72
HDAC11-216ENST00000458642 PIGBQ92521 554 aa25.78■■□□□ 1.72
HDAC11-216ENST00000458642 MAP2P11137 1827 aaKnown RBP25.77■■□□□ 1.72
HDAC11-216ENST00000458642 C1QTNF8P60827 252 aa25.76■■□□□ 1.71
HDAC11-216ENST00000458642 EYA1Q99502 592 aa25.75■■□□□ 1.71
HDAC11-216ENST00000458642 UBR3Q6ZT12 1888 aa25.74■■□□□ 1.71
HDAC11-216ENST00000458642 WASHC2AQ641Q2 1341 aa25.74■■□□□ 1.71
HDAC11-216ENST00000458642 PHF14O94880 888 aa25.73■■□□□ 1.71
HDAC11-216ENST00000458642 NKX1-1Q15270 411 aaPredicted RBP25.73■■□□□ 1.71
HDAC11-216ENST00000458642 POLR3GLQ9BT43 218 aa25.73■■□□□ 1.71
HDAC11-216ENST00000458642 POLKQ9UBT6 870 aa25.73■■□□□ 1.71
HDAC11-216ENST00000458642 SENP3-EIF4A1A0A087X0R7 540 aa25.72■■□□□ 1.71
HDAC11-216ENST00000458642 TNNT2P45379 298 aaPredicted RBP25.71■■□□□ 1.71
HDAC11-216ENST00000458642 SMARCC1Q92922 1105 aaPredicted RBP25.71■■□□□ 1.71
HDAC11-216ENST00000458642 AK7Q96M32 723 aa25.71■■□□□ 1.71
HDAC11-216ENST00000458642 LINC00116Q8NCU8 138 aa25.7■■□□□ 1.7
HDAC11-216ENST00000458642 SPG7Q9UQ90 795 aa25.7■■□□□ 1.7
HDAC11-216ENST00000458642 FLAD1Q8NFF5 587 aa25.69■■□□□ 1.7
HDAC11-216ENST00000458642 ASAP1Q9ULH1 1129 aa25.69■■□□□ 1.7
HDAC11-216ENST00000458642 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.68■■□□□ 1.7
HDAC11-216ENST00000458642 WWC3Q9ULE0 1092 aa25.68■■□□□ 1.7
HDAC11-216ENST00000458642 LOC102724428A0A0B4J2F2 783 aa25.67■■□□□ 1.7
HDAC11-216ENST00000458642 PHKG2P15735 406 aa25.67■■□□□ 1.7
HDAC11-216ENST00000458642 SIK1P57059 783 aa25.67■■□□□ 1.7
HDAC11-216ENST00000458642 ITPK1Q13572 414 aa25.67■■□□□ 1.7
HDAC11-216ENST00000458642 EIF4A2Q14240 407 aaKnown RBP25.67■■□□□ 1.7
HDAC11-216ENST00000458642 CD2APQ9Y5K6 639 aa25.67■■□□□ 1.7
HDAC11-216ENST00000458642 GRIN3BO60391 1043 aa25.66■■□□□ 1.7
HDAC11-216ENST00000458642 GIGYF1O75420 1035 aaPredicted RBP25.66■■□□□ 1.7
HDAC11-216ENST00000458642 TMOD3Q9NYL9 352 aa25.66■■□□□ 1.7
HDAC11-216ENST00000458642 PCGF6Q9BYE7 350 aa25.64■■□□□ 1.7
HDAC11-216ENST00000458642 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.64■■□□□ 1.7
HDAC11-216ENST00000458642 IFNL2Q8IZJ0 200 aa25.63■■□□□ 1.69
HDAC11-216ENST00000458642 TIMELESSQ9UNS1 1208 aa25.63■■□□□ 1.69
HDAC11-216ENST00000458642 ATG3Q9NT62 314 aa25.62■■□□□ 1.69
HDAC11-216ENST00000458642 GNPATO15228 680 aa25.61■■□□□ 1.69
HDAC11-216ENST00000458642 ATP10DQ9P241 1426 aa25.61■■□□□ 1.69
HDAC11-216ENST00000458642 SSFA2P28290 1259 aa25.6■■□□□ 1.69
HDAC11-216ENST00000458642 ATP6V1AP38606 617 aa25.6■■□□□ 1.69
HDAC11-216ENST00000458642 IGSF1Q8N6C5 1336 aa25.59■■□□□ 1.69
HDAC11-216ENST00000458642 SLC4A9Q96Q91 983 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms