RNA–Protein interactions for RNA: ENST00000458604.6

PSMC6-202, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-202ENST00000458604 SPSB2Q99619 263 aa12.78□□□□□ -0.36
PSMC6-202ENST00000458604 UNC93B1Q9H1C4 597 aa12.78□□□□□ -0.36
PSMC6-202ENST00000458604 DNMT3AQ9Y6K1 912 aaPredicted RBP12.78□□□□□ -0.36
PSMC6-202ENST00000458604 HRO43593 1189 aa12.77□□□□□ -0.37
PSMC6-202ENST00000458604 LGR5O75473 907 aa12.77□□□□□ -0.37
PSMC6-202ENST00000458604 BCAMP50895 628 aa12.77□□□□□ -0.37
PSMC6-202ENST00000458604 ARHGAP4P98171 946 aa12.77□□□□□ -0.37
PSMC6-202ENST00000458604 RECKO95980 971 aa12.76□□□□□ -0.37
PSMC6-202ENST00000458604 MAPK1P28482 360 aa12.76□□□□□ -0.37
PSMC6-202ENST00000458604 CAPN12Q6ZSI9 719 aa12.76□□□□□ -0.37
PSMC6-202ENST00000458604 ANKK1Q8NFD2 765 aa12.76□□□□□ -0.37
PSMC6-202ENST00000458604 TSR3Q9UJK0 312 aaKnown RBP12.76□□□□□ -0.37
PSMC6-202ENST00000458604 DCTN4Q9UJW0 460 aa12.76□□□□□ -0.37
PSMC6-202ENST00000458604 ADGRD1Q6QNK2 874 aa12.75□□□□□ -0.37
PSMC6-202ENST00000458604 C8orf37Q96NL8 207 aa12.75□□□□□ -0.37
PSMC6-202ENST00000458604 CARD14Q9BXL6 1004 aa12.75□□□□□ -0.37
PSMC6-202ENST00000458604 WEE1P30291 646 aa12.74□□□□□ -0.37
PSMC6-202ENST00000458604 RNF166Q96A37 237 aaPredicted RBP12.74□□□□□ -0.37
PSMC6-202ENST00000458604 MTMR3Q13615 1198 aa12.73□□□□□ -0.37
PSMC6-202ENST00000458604 ERFEQ4G0M1 354 aa12.73□□□□□ -0.37
PSMC6-202ENST00000458604 PURBQ96QR8 312 aaKnown RBP12.73□□□□□ -0.37
PSMC6-202ENST00000458604 RBM19Q9Y4C8 960 aaKnown RBP12.73□□□□□ -0.37
PSMC6-202ENST00000458604 FKBP4Q02790 459 aaKnown RBP eCLIP12.72□□□□□ -0.37
PSMC6-202ENST00000458604 FKBP5Q13451 457 aaPredicted RBP12.72□□□□□ -0.37
PSMC6-202ENST00000458604 MKNK1Q9BUB5 465 aa12.72□□□□□ -0.37
PSMC6-202ENST00000458604 MAGEB6P1A0A0J9YX57 407 aa12.71□□□□□ -0.37
PSMC6-202ENST00000458604 PSME1Q06323 249 aa12.71□□□□□ -0.37
PSMC6-202ENST00000458604 SF3B2Q13435 895 aaKnown RBP12.7□□□□□ -0.38
PSMC6-202ENST00000458604 COL19A1Q14993 1142 aa12.7□□□□□ -0.38
PSMC6-202ENST00000458604 C4orf48Q5BLP8 95 aa12.7□□□□□ -0.38
PSMC6-202ENST00000458604 RNF20Q5VTR2 975 aa12.7□□□□□ -0.38
PSMC6-202ENST00000458604 TSEN2Q8NCE0 465 aaKnown RBP12.7□□□□□ -0.38
PSMC6-202ENST00000458604 HINFPQ9BQA5 517 aa12.7□□□□□ -0.38
PSMC6-202ENST00000458604 ESPNB1AK53 854 aa12.69□□□□□ -0.38
PSMC6-202ENST00000458604 M0R2N6 131 aa12.68□□□□□ -0.38
PSMC6-202ENST00000458604 ZSCAN29Q8IWY8 852 aaPredicted RBP12.68□□□□□ -0.38
PSMC6-202ENST00000458604 RGL4Q8IZJ4 473 aa12.68□□□□□ -0.38
PSMC6-202ENST00000458604 COPS2P61201 443 aa12.67□□□□□ -0.38
PSMC6-202ENST00000458604 LSM11P83369 360 aaKnown RBP eCLIP12.67□□□□□ -0.38
PSMC6-202ENST00000458604 USP4Q13107 963 aa12.67□□□□□ -0.38
PSMC6-202ENST00000458604 FOXJ1Q92949 421 aa12.67□□□□□ -0.38
PSMC6-202ENST00000458604 TLL1O43897 1013 aa12.66□□□□□ -0.38
PSMC6-202ENST00000458604 CCDC24Q8N4L8 307 aa12.66□□□□□ -0.38
PSMC6-202ENST00000458604 GAS2L2Q8NHY3 880 aa12.66□□□□□ -0.38
PSMC6-202ENST00000458604 PUS7Q96PZ0 661 aaKnown RBP12.66□□□□□ -0.38
PSMC6-202ENST00000458604 PCDHB11Q9Y5F2 797 aa12.66□□□□□ -0.38
PSMC6-202ENST00000458604 PTCD1O75127 700 aaKnown RBP12.65□□□□□ -0.38
PSMC6-202ENST00000458604 BPHLQ86WA6 291 aaPredicted RBP12.65□□□□□ -0.38
PSMC6-202ENST00000458604 SREK1Q8WXA9 508 aaKnown RBP12.65□□□□□ -0.38
PSMC6-202ENST00000458604 BAP1Q92560 729 aa12.65□□□□□ -0.38
PSMC6-202ENST00000458604 DRC1Q96MC2 740 aa12.65□□□□□ -0.38
PSMC6-202ENST00000458604 WBP1LQ9NX94 342 aa12.65□□□□□ -0.38
PSMC6-202ENST00000458604 GOLGA8CPA6NN73 597 aa12.64□□□□□ -0.39
PSMC6-202ENST00000458604 NPR3P17342 541 aa12.64□□□□□ -0.39
PSMC6-202ENST00000458604 ZC3H6P61129 1189 aaKnown RBP12.64□□□□□ -0.39
PSMC6-202ENST00000458604 COL26A1Q96A83 441 aa12.64□□□□□ -0.39
PSMC6-202ENST00000458604 C1QTNF2Q9BXJ5 285 aa12.64□□□□□ -0.39
PSMC6-202ENST00000458604 ADH1BP00325 375 aa12.63□□□□□ -0.39
PSMC6-202ENST00000458604 EAPPQ56P03 285 aaPredicted RBP12.63□□□□□ -0.39
PSMC6-202ENST00000458604 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.63□□□□□ -0.39
PSMC6-202ENST00000458604 HELQQ8TDG4 1101 aa12.63□□□□□ -0.39
PSMC6-202ENST00000458604 SLC10A4Q96EP9 437 aa12.63□□□□□ -0.39
PSMC6-202ENST00000458604 MRPL58Q14197 206 aaKnown RBP12.62□□□□□ -0.39
PSMC6-202ENST00000458604 TSNAXIP1Q2TAA8 658 aa12.62□□□□□ -0.39
PSMC6-202ENST00000458604 FAM177A1Q8N128 213 aaPredicted RBP12.62□□□□□ -0.39
PSMC6-202ENST00000458604 ZNF511Q8NB15 262 aa12.62□□□□□ -0.39
PSMC6-202ENST00000458604 WNT2BQ93097 391 aa12.62□□□□□ -0.39
PSMC6-202ENST00000458604 NAA30Q147X3 362 aaPredicted RBP12.61□□□□□ -0.39
PSMC6-202ENST00000458604 NBPF20Q3BBV1 942 aa12.61□□□□□ -0.39
PSMC6-202ENST00000458604 LINC01559Q495D7 138 aa12.61□□□□□ -0.39
PSMC6-202ENST00000458604 SEPT12Q8IYM1 358 aa12.61□□□□□ -0.39
PSMC6-202ENST00000458604 ZNF358Q9NW07 568 aa12.61□□□□□ -0.39
PSMC6-202ENST00000458604 P4HBP07237 508 aaKnown RBP12.6□□□□□ -0.39
PSMC6-202ENST00000458604 RBCK1Q9BYM8 510 aa12.6□□□□□ -0.39
PSMC6-202ENST00000458604 ZPR1O75312 459 aa12.59□□□□□ -0.39
PSMC6-202ENST00000458604 IGFBP4P22692 258 aa12.59□□□□□ -0.39
PSMC6-202ENST00000458604 AGERQ15109 404 aa12.59□□□□□ -0.39
PSMC6-202ENST00000458604 LDLRAD1Q5T700 205 aa12.59□□□□□ -0.39
PSMC6-202ENST00000458604 TMC7Q7Z402 723 aa12.59□□□□□ -0.39
PSMC6-202ENST00000458604 BACH2Q9BYV9 841 aa12.59□□□□□ -0.39
PSMC6-202ENST00000458604 TMEM229AB2RXF0 380 aa12.58□□□□□ -0.4
PSMC6-202ENST00000458604 HSP90B1P14625 803 aaKnown RBP12.58□□□□□ -0.4
PSMC6-202ENST00000458604 NAALADL2Q58DX5 795 aa12.58□□□□□ -0.4
PSMC6-202ENST00000458604 CCDC125Q86Z20 511 aa12.58□□□□□ -0.4
PSMC6-202ENST00000458604 TRMT44Q8IYL2 757 aaKnown RBP12.58□□□□□ -0.4
PSMC6-202ENST00000458604 SCRIBQ14160 1630 aa12.58□□□□□ -0.4
PSMC6-202ENST00000458604 FOXO3O43524 673 aa12.57□□□□□ -0.4
PSMC6-202ENST00000458604 SCTRP47872 440 aa12.57□□□□□ -0.4
PSMC6-202ENST00000458604 HMGB1P09429 215 aaKnown RBP12.56□□□□□ -0.4
PSMC6-202ENST00000458604 FAM13AO94988 1023 aa12.55□□□□□ -0.4
PSMC6-202ENST00000458604 TREHO43280 583 aa12.54□□□□□ -0.4
PSMC6-202ENST00000458604 MPSTP25325 297 aa12.54□□□□□ -0.4
PSMC6-202ENST00000458604 FMR1Q06787 632 aaKnown RBP eCLIP12.54□□□□□ -0.4
PSMC6-202ENST00000458604 HDLBPQ00341 1268 aaKnown RBP12.53□□□□□ -0.4
PSMC6-202ENST00000458604 STAC3Q96MF2 364 aa12.53□□□□□ -0.4
PSMC6-202ENST00000458604 SLC6A16Q9GZN6 736 aa12.53□□□□□ -0.4
PSMC6-202ENST00000458604 CDV3Q9UKY7 258 aaKnown RBP12.53□□□□□ -0.4
PSMC6-202ENST00000458604 MYCP01106 439 aaPredicted RBP12.52□□□□□ -0.41
PSMC6-202ENST00000458604 SCNN1DP51172 638 aa12.52□□□□□ -0.41
PSMC6-202ENST00000458604 EPHA4P54764 986 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms