RNA–Protein interactions for RNA: ENST00000458294.5

PBRM1-218, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-218ENST00000458294 MEGF6O75095 1541 aa36.99■■■■□ 3.51
PBRM1-218ENST00000458294 LY75O60449 1722 aa36.99■■■■□ 3.51
PBRM1-218ENST00000458294 PRIM1P49642 420 aaKnown RBP36.98■■■■□ 3.51
PBRM1-218ENST00000458294 TMF1P82094 1093 aa36.97■■■■□ 3.51
PBRM1-218ENST00000458294 NSD2O96028 1365 aa36.96■■■■□ 3.51
PBRM1-218ENST00000458294 COL24A1Q17RW2 1714 aa36.95■■■■□ 3.51
PBRM1-218ENST00000458294 FYB1O15117 783 aa36.94■■■■□ 3.5
PBRM1-218ENST00000458294 SMG6Q86US8 1419 aaKnown RBP36.93■■■■□ 3.5
PBRM1-218ENST00000458294 CGNL1Q0VF96 1302 aa36.93■■■■□ 3.5
PBRM1-218ENST00000458294 PNPLA7Q6ZV29 1317 aa36.93■■■■□ 3.5
PBRM1-218ENST00000458294 RRS1Q15050 365 aaKnown RBP36.93■■■■□ 3.5
PBRM1-218ENST00000458294 TUBGCP6Q96RT7 1819 aa36.93■■■■□ 3.5
PBRM1-218ENST00000458294 CHD4Q14839 1912 aa36.93■■■■□ 3.5
PBRM1-218ENST00000458294 USP47Q96K76 1375 aa36.92■■■■□ 3.5
PBRM1-218ENST00000458294 GGNBP2Q9H3C7 697 aa36.92■■■■□ 3.5
PBRM1-218ENST00000458294 NBPF6Q5VWK0 638 aa36.91■■■■□ 3.5
PBRM1-218ENST00000458294 NBPF4Q96M43 638 aa36.91■■■■□ 3.5
PBRM1-218ENST00000458294 TFCP2L1Q9NZI6 479 aa36.91■■■■□ 3.5
PBRM1-218ENST00000458294 POLD1P28340 1107 aa36.89■■■■□ 3.5
PBRM1-218ENST00000458294 KIF20BQ96Q89 1820 aa36.89■■■■□ 3.5
PBRM1-218ENST00000458294 ZNF784Q8NCA9 323 aaPredicted RBP36.88■■■■□ 3.49
PBRM1-218ENST00000458294 KCNQ4P56696 695 aa36.87■■■■□ 3.49
PBRM1-218ENST00000458294 RAPGEF4Q8WZA2 1011 aa36.87■■■■□ 3.49
PBRM1-218ENST00000458294 CDCA8Q53HL2 280 aa36.86■■■■□ 3.49
PBRM1-218ENST00000458294 CCNL1Q9UK58 526 aaPredicted RBP36.85■■■■□ 3.49
PBRM1-218ENST00000458294 INSRP06213 1382 aa36.85■■■■□ 3.49
PBRM1-218ENST00000458294 KIF24Q5T7B8 1368 aa36.84■■■■□ 3.49
PBRM1-218ENST00000458294 USHBP1Q8N6Y0 703 aa36.84■■■■□ 3.49
PBRM1-218ENST00000458294 FLT4P35916 1363 aa36.82■■■■□ 3.49
PBRM1-218ENST00000458294 TATP17735 454 aaPredicted RBP36.82■■■■□ 3.48
PBRM1-218ENST00000458294 HSP90AB2PQ58FF8 381 aa36.8■■■■□ 3.48
PBRM1-218ENST00000458294 GPR162Q16538 588 aa36.79■■■■□ 3.48
PBRM1-218ENST00000458294 KLHL34Q8N239 644 aa36.79■■■■□ 3.48
PBRM1-218ENST00000458294 PCDH11XQ9BZA7 1347 aa36.78■■■■□ 3.48
PBRM1-218ENST00000458294 PCDH11YQ9BZA8 1340 aa36.78■■■■□ 3.48
PBRM1-218ENST00000458294 HMGB2P26583 209 aaKnown RBP36.74■■■■□ 3.47
PBRM1-218ENST00000458294 C5P01031 1676 aa36.74■■■■□ 3.47
PBRM1-218ENST00000458294 TRIM26Q12899 539 aaPredicted RBP36.71■■■■□ 3.47
PBRM1-218ENST00000458294 COL23A1Q86Y22 540 aaPredicted RBP36.7■■■■□ 3.47
PBRM1-218ENST00000458294 NSD3Q9BZ95 1437 aa36.69■■■■□ 3.46
PBRM1-218ENST00000458294 MSH5O43196 834 aa36.69■■■■□ 3.46
PBRM1-218ENST00000458294 CARD14Q9BXL6 1004 aa36.69■■■■□ 3.46
PBRM1-218ENST00000458294 PKD1L3Q7Z443 1732 aa36.68■■■■□ 3.46
PBRM1-218ENST00000458294 NLGN2Q8NFZ4 835 aa36.67■■■■□ 3.46
PBRM1-218ENST00000458294 PALLDQ8WX93 1383 aa36.66■■■■□ 3.46
PBRM1-218ENST00000458294 TAF1LQ8IZX4 1826 aa36.66■■■■□ 3.46
PBRM1-218ENST00000458294 ANKRD26Q9UPS8 1709 aa36.65■■■■□ 3.46
PBRM1-218ENST00000458294 TOGARAM1Q9Y4F4 1720 aa36.65■■■■□ 3.46
PBRM1-218ENST00000458294 CYP27B1O15528 508 aa36.65■■■■□ 3.46
PBRM1-218ENST00000458294 PELP1Q8IZL8 1130 aaKnown RBP36.65■■■■□ 3.46
PBRM1-218ENST00000458294 EMILIN1Q9Y6C2 1016 aa36.65■■■■□ 3.46
PBRM1-218ENST00000458294 NCAPD2Q15021 1401 aa36.65■■■■□ 3.46
PBRM1-218ENST00000458294 MPRIPQ6WCQ1 1025 aa36.64■■■■□ 3.46
PBRM1-218ENST00000458294 ITGB4P16144 1822 aa36.64■■■■□ 3.46
PBRM1-218ENST00000458294 GOLGB1Q14789 3259 aaKnown RBP36.63■■■■□ 3.45
PBRM1-218ENST00000458294 FLAD1Q8NFF5 587 aa36.63■■■■□ 3.45
PBRM1-218ENST00000458294 SMARCC1Q92922 1105 aaPredicted RBP36.61■■■■□ 3.45
PBRM1-218ENST00000458294 TIMELESSQ9UNS1 1208 aa36.6■■■■□ 3.45
PBRM1-218ENST00000458294 C4BP0C0L5 1744 aa36.58■■■■□ 3.45
PBRM1-218ENST00000458294 MSL1Q68DK7 614 aa36.57■■■■□ 3.44
PBRM1-218ENST00000458294 WASHC2AQ641Q2 1341 aa36.57■■■■□ 3.44
PBRM1-218ENST00000458294 PPM1GO15355 546 aaPredicted RBP36.56■■■■□ 3.44
PBRM1-218ENST00000458294 C1QTNF8P60827 252 aa36.56■■■■□ 3.44
PBRM1-218ENST00000458294 NKX1-1Q15270 411 aaPredicted RBP36.56■■■■□ 3.44
PBRM1-218ENST00000458294 SPG7Q9UQ90 795 aa36.56■■■■□ 3.44
PBRM1-218ENST00000458294 GRIN3BO60391 1043 aa36.55■■■■□ 3.44
PBRM1-218ENST00000458294 MAP2P11137 1827 aaKnown RBP36.55■■■■□ 3.44
PBRM1-218ENST00000458294 PIGBQ92521 554 aa36.52■■■■□ 3.44
PBRM1-218ENST00000458294 AK7Q96M32 723 aa36.52■■■■□ 3.44
PBRM1-218ENST00000458294 YBX3P16989 372 aaKnown RBP eCLIP36.51■■■■□ 3.44
PBRM1-218ENST00000458294 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP36.51■■■■□ 3.441e-8■■□□□ 12
PBRM1-218ENST00000458294 CD2APQ9Y5K6 639 aa36.51■■■■□ 3.44
PBRM1-218ENST00000458294 EYA1Q99502 592 aa36.49■■■■□ 3.43
PBRM1-218ENST00000458294 UBR3Q6ZT12 1888 aa36.49■■■■□ 3.43
PBRM1-218ENST00000458294 SENP3-EIF4A1A0A087X0R7 540 aa36.47■■■■□ 3.43
PBRM1-218ENST00000458294 GIGYF1O75420 1035 aaPredicted RBP36.46■■■■□ 3.43
PBRM1-218ENST00000458294 POLKQ9UBT6 870 aa36.46■■■■□ 3.43
PBRM1-218ENST00000458294 CLSPNQ9HAW4 1339 aa36.43■■■■□ 3.42
PBRM1-218ENST00000458294 LOC102724428A0A0B4J2F2 783 aa36.43■■■■□ 3.42
PBRM1-218ENST00000458294 SIK1P57059 783 aa36.43■■■■□ 3.42
PBRM1-218ENST00000458294 TMOD3Q9NYL9 352 aa36.43■■■■□ 3.42
PBRM1-218ENST00000458294 PLEKHG2Q9H7P9 1386 aa36.42■■■■□ 3.42
PBRM1-218ENST00000458294 AMIGO3Q86WK7 504 aa36.42■■■■□ 3.42
PBRM1-218ENST00000458294 IFNL2Q8IZJ0 200 aa36.42■■■■□ 3.42
PBRM1-218ENST00000458294 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP36.41■■■■□ 3.42
PBRM1-218ENST00000458294 PHKG2P15735 406 aa36.41■■■■□ 3.42
PBRM1-218ENST00000458294 SSFA2P28290 1259 aa36.41■■■■□ 3.42
PBRM1-218ENST00000458294 PHF14O94880 888 aa36.4■■■■□ 3.42
PBRM1-218ENST00000458294 LINC00116Q8NCU8 138 aa36.38■■■■□ 3.41
PBRM1-218ENST00000458294 EIF4A2Q14240 407 aaKnown RBP36.37■■■■□ 3.41
PBRM1-218ENST00000458294 POLR3GLQ9BT43 218 aa36.36■■■■□ 3.41
PBRM1-218ENST00000458294 ASAP1Q9ULH1 1129 aa36.36■■■■□ 3.41
PBRM1-218ENST00000458294 SMIM5Q71RC9 77 aa36.33■■■■□ 3.41
PBRM1-218ENST00000458294 ATP6V1AP38606 617 aa36.32■■■■□ 3.4
PBRM1-218ENST00000458294 TNNT2P45379 298 aaPredicted RBP36.32■■■■□ 3.4
PBRM1-218ENST00000458294 ITPK1Q13572 414 aa36.32■■■■□ 3.4
PBRM1-218ENST00000458294 ATG3Q9NT62 314 aa36.31■■■■□ 3.4
PBRM1-218ENST00000458294 IGSF1Q8N6C5 1336 aa36.31■■■■□ 3.4
PBRM1-218ENST00000458294 GNPATO15228 680 aa36.3■■■■□ 3.4
PBRM1-218ENST00000458294 ATP10DQ9P241 1426 aa36.29■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms