RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 CCT4P50991 539 aaKnown RBP23.15■■□□□ 1.3
SNX27-204ENST00000458013 KIAA1328Q86T90 577 aa23.15■■□□□ 1.3
SNX27-204ENST00000458013 EXOC6BQ9Y2D4 811 aa23.15■■□□□ 1.3
SNX27-204ENST00000458013 BLOC1S2Q6QNY1 142 aa23.15■■□□□ 1.3
SNX27-204ENST00000458013 NUP62CLQ9H1M0 184 aa23.14■■□□□ 1.3
SNX27-204ENST00000458013 DACH1Q9UI36 760 aa23.14■■□□□ 1.29
SNX27-204ENST00000458013 USHBP1Q8N6Y0 703 aa23.14■■□□□ 1.29
SNX27-204ENST00000458013 BACH2Q9BYV9 841 aa23.13■■□□□ 1.29
SNX27-204ENST00000458013 OSCARQ8IYS5 282 aa23.13■■□□□ 1.29
SNX27-204ENST00000458013 PPFIA3O75145 1194 aa23.13■■□□□ 1.29
SNX27-204ENST00000458013 CEP57L1Q8IYX8 460 aa23.13■■□□□ 1.29
SNX27-204ENST00000458013 CCDC82Q8N4S0 544 aa23.13■■□□□ 1.29
SNX27-204ENST00000458013 JMYQ8N9B5 988 aa23.13■■□□□ 1.29
SNX27-204ENST00000458013 ANKRD1Q15327 319 aa23.13■■□□□ 1.29
SNX27-204ENST00000458013 TMEM57Q8N5G2 664 aa23.13■■□□□ 1.29
SNX27-204ENST00000458013 UPF3BQ9BZI7 483 aaKnown RBP23.13■■□□□ 1.29
SNX27-204ENST00000458013 LRP2BPQ9P2M1 347 aa23.13■■□□□ 1.29
SNX27-204ENST00000458013 FGD5Q6ZNL6 1462 aa23.13■■□□□ 1.29
SNX27-204ENST00000458013 UBAC1Q9BSL1 405 aa23.12■■□□□ 1.29
SNX27-204ENST00000458013 NCOA2Q15596 1464 aa23.12■■□□□ 1.29
SNX27-204ENST00000458013 KLHL10Q6JEL2 608 aa23.12■■□□□ 1.29
SNX27-204ENST00000458013 ATF7IPQ6VMQ6 1270 aa23.12■■□□□ 1.29
SNX27-204ENST00000458013 MCM10Q7L590 875 aa23.12■■□□□ 1.29
SNX27-204ENST00000458013 GAPVD1Q14C86 1478 aa23.12■■□□□ 1.29
SNX27-204ENST00000458013 PKNOX2Q96KN3 472 aa23.11■■□□□ 1.29
SNX27-204ENST00000458013 NOL7Q9UMY1 257 aaKnown RBP23.11■■□□□ 1.29
SNX27-204ENST00000458013 NBPF8Q3BBV2 869 aa23.11■■□□□ 1.29
SNX27-204ENST00000458013 ABCF2Q9UG63 623 aa23.11■■□□□ 1.29
SNX27-204ENST00000458013 EIF5P55010 431 aaKnown RBP23.11■■□□□ 1.29
SNX27-204ENST00000458013 AQRO60306 1485 aaKnown RBP eCLIP23.11■■□□□ 1.29
SNX27-204ENST00000458013 CCDC113Q9H0I3 377 aa23.1■■□□□ 1.29
SNX27-204ENST00000458013 LRRC9Q6ZRR7 1453 aa23.1■■□□□ 1.29
SNX27-204ENST00000458013 CBX1P83916 185 aa23.1■■□□□ 1.29
SNX27-204ENST00000458013 KIF21BO75037 1637 aa23.1■■□□□ 1.29
SNX27-204ENST00000458013 PIP4K2AP48426 406 aaPredicted RBP23.09■■□□□ 1.29
SNX27-204ENST00000458013 PRPF40BQ6NWY9 871 aaKnown RBP23.09■■□□□ 1.29
SNX27-204ENST00000458013 TRMT1LQ7Z2T5 733 aaKnown RBP23.09■■□□□ 1.29
SNX27-204ENST00000458013 TNNT1P13805 278 aa23.09■■□□□ 1.29
SNX27-204ENST00000458013 FYCO1Q9BQS8 1478 aa23.09■■□□□ 1.29
SNX27-204ENST00000458013 CBFA2T2O43439 604 aa23.09■■□□□ 1.29
SNX27-204ENST00000458013 RRBP1Q9P2E9 1410 aaKnown RBP23.09■■□□□ 1.29
SNX27-204ENST00000458013 MINDY4BA8MYZ0 360 aa23.08■■□□□ 1.29
SNX27-204ENST00000458013 CFAP100Q494V2 611 aa23.08■■□□□ 1.29
SNX27-204ENST00000458013 ZC3H6P61129 1189 aaKnown RBP23.08■■□□□ 1.29
SNX27-204ENST00000458013 MTERF4Q7Z6M4 381 aaKnown RBP23.08■■□□□ 1.29
SNX27-204ENST00000458013 AAMPQ13685 434 aa23.08■■□□□ 1.28
SNX27-204ENST00000458013 UBA5Q9GZZ9 404 aa23.08■■□□□ 1.28
SNX27-204ENST00000458013 NEBLO76041 1014 aa23.07■■□□□ 1.28
SNX27-204ENST00000458013 SLC26A8Q96RN1 970 aa23.07■■□□□ 1.28
SNX27-204ENST00000458013 SPG7Q9UQ90 795 aa23.07■■□□□ 1.28
SNX27-204ENST00000458013 PDE3AQ14432 1141 aa23.06■■□□□ 1.28
SNX27-204ENST00000458013 TRERF1Q96PN7 1200 aa23.06■■□□□ 1.28
SNX27-204ENST00000458013 BOLA2Q9H3K6 86 aa23.06■■□□□ 1.28
SNX27-204ENST00000458013 ZNF219Q9P2Y4 722 aaPredicted RBP23.06■■□□□ 1.28
SNX27-204ENST00000458013 ZRSR2Q15696 482 aaKnown RBP23.06■■□□□ 1.28
SNX27-204ENST00000458013 GOPCQ9HD26 462 aa23.06■■□□□ 1.28
SNX27-204ENST00000458013 LIG1P18858 919 aa23.06■■□□□ 1.28
SNX27-204ENST00000458013 SMARCA4P51532 1647 aa23.06■■□□□ 1.28
SNX27-204ENST00000458013 EPB41L2O43491 1005 aaKnown RBP23.06■■□□□ 1.28
SNX27-204ENST00000458013 CCDC97Q96F63 343 aaPredicted RBP23.06■■□□□ 1.28
SNX27-204ENST00000458013 ZFP91Q96JP5 570 aaPredicted RBP23.06■■□□□ 1.28
SNX27-204ENST00000458013 CCDC144CPQ8IYA2 1237 aa23.05■■□□□ 1.28
SNX27-204ENST00000458013 CPLX3Q8WVH0 158 aa23.05■■□□□ 1.28
SNX27-204ENST00000458013 CFTRP13569 1480 aa23.05■■□□□ 1.28
SNX27-204ENST00000458013 AIDAQ96BJ3 306 aa23.05■■□□□ 1.28
SNX27-204ENST00000458013 GBP2P32456 591 aaPredicted RBP23.05■■□□□ 1.28
SNX27-204ENST00000458013 C20orf194Q5TEA3 1177 aa23.05■■□□□ 1.28
SNX27-204ENST00000458013 RAB11FIP4Q86YS3 637 aa23.05■■□□□ 1.28
SNX27-204ENST00000458013 HMGN5P82970 282 aaKnown RBP23.04■■□□□ 1.28
SNX27-204ENST00000458013 ISM2Q6H9L7 571 aa23.04■■□□□ 1.28
SNX27-204ENST00000458013 BCCIPQ9P287 314 aaKnown RBP eCLIP23.04■■□□□ 1.28
SNX27-204ENST00000458013 ZBTB9Q96C00 473 aa23.04■■□□□ 1.28
SNX27-204ENST00000458013 MYD88Q99836 296 aa23.04■■□□□ 1.28
SNX27-204ENST00000458013 TRMT1Q9NXH9 659 aaKnown RBP23.03■■□□□ 1.28
SNX27-204ENST00000458013 PTCD1O75127 700 aaKnown RBP23.03■■□□□ 1.28
SNX27-204ENST00000458013 ZSCAN25Q6NSZ9 544 aa23.03■■□□□ 1.28
SNX27-204ENST00000458013 ERLIN1O75477 346 aa23.03■■□□□ 1.28
SNX27-204ENST00000458013 MYCNP04198 464 aaPredicted RBP23.03■■□□□ 1.28
SNX27-204ENST00000458013 MCM4P33991 863 aa23.03■■□□□ 1.28
SNX27-204ENST00000458013 ERBINQ96RT1 1412 aa23.03■■□□□ 1.28
SNX27-204ENST00000458013 METTL24Q5JXM2 366 aa23.02■■□□□ 1.28
SNX27-204ENST00000458013 ATAD2BQ9ULI0 1458 aa23.02■■□□□ 1.28
SNX27-204ENST00000458013 CCDC178Q5BJE1 867 aa23.02■■□□□ 1.28
SNX27-204ENST00000458013 CASQ1P31415 396 aa23.02■■□□□ 1.28
SNX27-204ENST00000458013 IMMTQ16891 758 aaKnown RBP23.01■■□□□ 1.27
SNX27-204ENST00000458013 CCDC8Q9H0W5 538 aaPredicted RBP23.01■■□□□ 1.27
SNX27-204ENST00000458013 RTEL1-TNFRSF6BF6WH68 1400 aa23.01■■□□□ 1.27
SNX27-204ENST00000458013 F6X3S4 739 aa23.01■■□□□ 1.27
SNX27-204ENST00000458013 EIF3JO75822 258 aaKnown RBP23.01■■□□□ 1.27
SNX27-204ENST00000458013 MAP3K11Q16584 847 aa23.01■■□□□ 1.27
SNX27-204ENST00000458013 ANKRD18AQ8IVF6 992 aa23.01■■□□□ 1.27
SNX27-204ENST00000458013 CKAP2LQ8IYA6 745 aa23.01■■□□□ 1.27
SNX27-204ENST00000458013 LUC7LQ9NQ29 371 aaKnown RBP23.01■■□□□ 1.27
SNX27-204ENST00000458013 CFAP45Q9UL16 551 aa23.01■■□□□ 1.27
SNX27-204ENST00000458013 GDPD2Q9HCC8 539 aa23■■□□□ 1.27
SNX27-204ENST00000458013 TAF4BQ92750 862 aa23■■□□□ 1.27
SNX27-204ENST00000458013 CCT2P78371 535 aaKnown RBP23■■□□□ 1.27
SNX27-204ENST00000458013 CDKL5O76039 1030 aa23■■□□□ 1.27
SNX27-204ENST00000458013 ARHGAP29Q52LW3 1261 aa22.99■■□□□ 1.27
SNX27-204ENST00000458013 CEP126Q9P2H0 1117 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms