RNA–Protein interactions for RNA: ENST00000457302.2

C9orf139-201, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 3

Gene C9orf139, Length 697 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-201ENST00000457302 EP400Q96L91 3159 aa16.54■□□□□ 0.24
C9orf139-201ENST00000457302 ZNF316A6NFI3 1004 aaPredicted RBP16.54■□□□□ 0.24
C9orf139-201ENST00000457302 PLEKHO1Q53GL0 409 aaPredicted RBP16.54■□□□□ 0.24
C9orf139-201ENST00000457302 ACSBG1Q96GR2 724 aa16.54■□□□□ 0.24
C9orf139-201ENST00000457302 NUDCQ9Y266 331 aa16.54■□□□□ 0.24
C9orf139-201ENST00000457302 PCDH11XQ9BZA7 1347 aa16.53■□□□□ 0.24
C9orf139-201ENST00000457302 PCDH11YQ9BZA8 1340 aa16.53■□□□□ 0.24
C9orf139-201ENST00000457302 IL13P35225 146 aa16.53■□□□□ 0.24
C9orf139-201ENST00000457302 SULT6B1Q6IMI4 303 aa16.53■□□□□ 0.24
C9orf139-201ENST00000457302 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.53■□□□□ 0.24
C9orf139-201ENST00000457302 IGSF1Q8N6C5 1336 aa16.52■□□□□ 0.24
C9orf139-201ENST00000457302 U2SURPO15042 1029 aaKnown RBP16.52■□□□□ 0.24
C9orf139-201ENST00000457302 PPP2R1AP30153 589 aa16.52■□□□□ 0.24
C9orf139-201ENST00000457302 RALBP1Q15311 655 aa16.52■□□□□ 0.24
C9orf139-201ENST00000457302 SYTL4Q96C24 671 aaPredicted RBP16.52■□□□□ 0.24
C9orf139-201ENST00000457302 BCL9O00512 1426 aa16.52■□□□□ 0.23
C9orf139-201ENST00000457302 SBF2Q86WG5 1849 aa16.52■□□□□ 0.23
C9orf139-201ENST00000457302 AMOTQ4VCS5 1084 aa16.51■□□□□ 0.23
C9orf139-201ENST00000457302 IFNL2Q8IZJ0 200 aa16.51■□□□□ 0.23
C9orf139-201ENST00000457302 MEGF6O75095 1541 aa16.5■□□□□ 0.23
C9orf139-201ENST00000457302 PLSCR1O15162 318 aa16.5■□□□□ 0.23
C9orf139-201ENST00000457302 EZH2Q15910 746 aaKnown RBP16.5■□□□□ 0.23
C9orf139-201ENST00000457302 NBPF14Q5TI25 921 aa16.5■□□□□ 0.23
C9orf139-201ENST00000457302 KCNQ2O43526 872 aa16.48■□□□□ 0.23
C9orf139-201ENST00000457302 HSP90AB1P08238 724 aaKnown RBP16.48■□□□□ 0.23
C9orf139-201ENST00000457302 PRIM1P49642 420 aaKnown RBP16.48■□□□□ 0.23
C9orf139-201ENST00000457302 C1orf141Q5JVX7 400 aa16.48■□□□□ 0.23
C9orf139-201ENST00000457302 CAMKK2Q96RR4 588 aa16.48■□□□□ 0.23
C9orf139-201ENST00000457302 PARD3Q8TEW0 1356 aa16.48■□□□□ 0.23
C9orf139-201ENST00000457302 HMOX1P09601 288 aa16.47■□□□□ 0.23
C9orf139-201ENST00000457302 NCAPD2Q15021 1401 aa16.46■□□□□ 0.23
C9orf139-201ENST00000457302 CYP27B1O15528 508 aa16.46■□□□□ 0.23
C9orf139-201ENST00000457302 AEBP1Q8IUX7 1158 aa16.46■□□□□ 0.23
C9orf139-201ENST00000457302 PLEKHG2Q9H7P9 1386 aa16.46■□□□□ 0.23
C9orf139-201ENST00000457302 TNS1Q9HBL0 1735 aaKnown RBP16.45■□□□□ 0.22
C9orf139-201ENST00000457302 NEFMP07197 916 aa16.45■□□□□ 0.22
C9orf139-201ENST00000457302 HMGB2P26583 209 aaKnown RBP16.45■□□□□ 0.22
C9orf139-201ENST00000457302 ZNF530Q6P9A1 599 aaPredicted RBP16.45■□□□□ 0.22
C9orf139-201ENST00000457302 U2AF1L5P0DN76 240 aaPredicted RBP16.44■□□□□ 0.22
C9orf139-201ENST00000457302 PHKG2P15735 406 aa16.44■□□□□ 0.22
C9orf139-201ENST00000457302 U2AF1Q01081 240 aaKnown RBP eCLIP16.44■□□□□ 0.22
C9orf139-201ENST00000457302 NKX1-1Q15270 411 aaPredicted RBP16.44■□□□□ 0.22
C9orf139-201ENST00000457302 MPRIPQ6WCQ1 1025 aa16.44■□□□□ 0.22
C9orf139-201ENST00000457302 PTF1AQ7RTS3 328 aa16.44■□□□□ 0.22
C9orf139-201ENST00000457302 KDRP35968 1356 aa16.42■□□□□ 0.22
C9orf139-201ENST00000457302 TXNRD1Q16881 649 aa16.42■□□□□ 0.22
C9orf139-201ENST00000457302 PNNQ9H307 717 aaKnown RBP16.42■□□□□ 0.22
C9orf139-201ENST00000457302 NHSQ6T4R5 1651 aa16.41■□□□□ 0.22
C9orf139-201ENST00000457302 DCAF5Q96JK2 942 aa16.41■□□□□ 0.22
C9orf139-201ENST00000457302 TMOD3Q9NYL9 352 aa16.41■□□□□ 0.22
C9orf139-201ENST00000457302 PKD1L3Q7Z443 1732 aa16.41■□□□□ 0.22
C9orf139-201ENST00000457302 SHANK3Q9BYB0 1731 aa16.41■□□□□ 0.22
C9orf139-201ENST00000457302 AKAP4Q5JQC9 854 aa16.4■□□□□ 0.22
C9orf139-201ENST00000457302 SMARCC1Q92922 1105 aaPredicted RBP16.4■□□□□ 0.22
C9orf139-201ENST00000457302 MYBBP1AQ9BQG0 1328 aaKnown RBP16.4■□□□□ 0.22
C9orf139-201ENST00000457302 ERVV-2B6SEH9 535 aa16.39■□□□□ 0.21
C9orf139-201ENST00000457302 FCHSD2O94868 740 aa16.39■□□□□ 0.21
C9orf139-201ENST00000457302 CABP4P57796 275 aa16.39■□□□□ 0.21
C9orf139-201ENST00000457302 BTAF1O14981 1849 aa16.39■□□□□ 0.21
C9orf139-201ENST00000457302 DOT1LQ8TEK3 1739 aa16.39■□□□□ 0.21
C9orf139-201ENST00000457302 SLC27A3Q5K4L6 730 aa16.38■□□□□ 0.21
C9orf139-201ENST00000457302 GAS2L2Q8NHY3 880 aa16.38■□□□□ 0.21
C9orf139-201ENST00000457302 STK32BQ9NY57 414 aa16.38■□□□□ 0.21
C9orf139-201ENST00000457302 R3HDM1Q15032 1099 aaKnown RBP16.37■□□□□ 0.21
C9orf139-201ENST00000457302 PROM2Q8N271 834 aa16.37■□□□□ 0.21
C9orf139-201ENST00000457302 PRKRIP1Q9H875 184 aaPredicted RBP16.37■□□□□ 0.21
C9orf139-201ENST00000457302 RGPD3A6NKT7 1758 aaPredicted RBP16.36■□□□□ 0.21
C9orf139-201ENST00000457302 RGPD4Q7Z3J3 1758 aa16.36■□□□□ 0.21
C9orf139-201ENST00000457302 PSDA5PKW4 1024 aaPredicted RBP16.36■□□□□ 0.21
C9orf139-201ENST00000457302 ANP32CO43423 234 aa16.36■□□□□ 0.21
C9orf139-201ENST00000457302 PRKAR2BP31323 418 aa16.36■□□□□ 0.21
C9orf139-201ENST00000457302 MTHFSDQ2M296 383 aaKnown RBP16.36■□□□□ 0.21
C9orf139-201ENST00000457302 PIGBQ92521 554 aa16.36■□□□□ 0.21
C9orf139-201ENST00000457302 ITGB4P16144 1822 aa16.35■□□□□ 0.21
C9orf139-201ENST00000457302 COL3A1P02461 1466 aaPredicted RBP16.35■□□□□ 0.21
C9orf139-201ENST00000457302 CCNL1Q9UK58 526 aaPredicted RBP16.35■□□□□ 0.21
C9orf139-201ENST00000457302 GNAT3A8MTJ3 354 aa16.34■□□□□ 0.21
C9orf139-201ENST00000457302 WDR43Q15061 677 aaKnown RBP eCLIP16.33■□□□□ 0.2
C9orf139-201ENST00000457302 NFATC2IPQ8NCF5 419 aa16.33■□□□□ 0.2
C9orf139-201ENST00000457302 RTF1Q92541 710 aaKnown RBP16.33■□□□□ 0.2
C9orf139-201ENST00000457302 RSPH6AQ9H0K4 717 aa16.33■□□□□ 0.2
C9orf139-201ENST00000457302 RREB1Q92766 1687 aa16.32■□□□□ 0.2
C9orf139-201ENST00000457302 MAPK8IP3Q9UPT6 1336 aa16.31■□□□□ 0.2
C9orf139-201ENST00000457302 RNMTO43148 476 aaKnown RBP16.31■□□□□ 0.2
C9orf139-201ENST00000457302 TEFQ10587 303 aa16.31■□□□□ 0.2
C9orf139-201ENST00000457302 SLC15A2Q16348 729 aa16.31■□□□□ 0.2
C9orf139-201ENST00000457302 PHACTR3Q96KR7 559 aa16.31■□□□□ 0.2
C9orf139-201ENST00000457302 SRCAPQ6ZRS2 3230 aa16.31■□□□□ 0.2
C9orf139-201ENST00000457302 PALLDQ8WX93 1383 aa16.3■□□□□ 0.2
C9orf139-201ENST00000457302 RBM42Q9BTD8 480 aaKnown RBP16.3■□□□□ 0.2
C9orf139-201ENST00000457302 LGR6Q9HBX8 967 aa16.3■□□□□ 0.2
C9orf139-201ENST00000457302 ASAP1Q9ULH1 1129 aa16.3■□□□□ 0.2
C9orf139-201ENST00000457302 NUP188Q5SRE5 1749 aa16.3■□□□□ 0.2
C9orf139-201ENST00000457302 SLC52A2Q9HAB3 445 aa16.29■□□□□ 0.2
C9orf139-201ENST00000457302 ATG3Q9NT62 314 aa16.29■□□□□ 0.2
C9orf139-201ENST00000457302 LRRC4BQ9NT99 713 aa16.29■□□□□ 0.2
C9orf139-201ENST00000457302 TFCP2L1Q9NZI6 479 aa16.29■□□□□ 0.2
C9orf139-201ENST00000457302 ATP6V1AP38606 617 aa16.28■□□□□ 0.2
C9orf139-201ENST00000457302 SCN11AQ9UI33 1791 aa16.28■□□□□ 0.2
C9orf139-201ENST00000457302 TOGARAM1Q9Y4F4 1720 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms