RNA–Protein interactions for RNA: ENST00000457270.5

TOP3B-214, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 2,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-214ENST00000457270 CUL4AQ13619 759 aa17.12■□□□□ 0.33
TOP3B-214ENST00000457270 TULP4Q9NRJ4 1543 aa17.12■□□□□ 0.33
TOP3B-214ENST00000457270 DIAPH3Q9NSV4 1193 aa17.12■□□□□ 0.33
TOP3B-214ENST00000457270 FEZ1Q99689 392 aa17.11■□□□□ 0.33
TOP3B-214ENST00000457270 EVC2Q86UK5 1308 aa17.11■□□□□ 0.33
TOP3B-214ENST00000457270 EFCAB6Q5THR3 1501 aa17.11■□□□□ 0.33
TOP3B-214ENST00000457270 SDSP20132 328 aa17.11■□□□□ 0.33
TOP3B-214ENST00000457270 INTS4Q96HW7 963 aaKnown RBP17.11■□□□□ 0.33
TOP3B-214ENST00000457270 TMX3Q96JJ7 454 aa17.11■□□□□ 0.33
TOP3B-214ENST00000457270 MROH1Q8NDA8 1641 aa17.11■□□□□ 0.33
TOP3B-214ENST00000457270 PPLO60437 1756 aa17.1■□□□□ 0.33
TOP3B-214ENST00000457270 CTIFO43310 598 aaKnown RBP17.1■□□□□ 0.33
TOP3B-214ENST00000457270 MAPK8IP2Q13387 824 aaPredicted RBP17.1■□□□□ 0.33
TOP3B-214ENST00000457270 TTC12Q9H892 705 aaPredicted RBP17.1■□□□□ 0.33
TOP3B-214ENST00000457270 PNPLA6Q8IY17 1366 aa17.1■□□□□ 0.33
TOP3B-214ENST00000457270 ADCY5O95622 1261 aa17.1■□□□□ 0.33
TOP3B-214ENST00000457270 USP25Q9UHP3 1055 aa17.1■□□□□ 0.33
TOP3B-214ENST00000457270 ERC2O15083 957 aa17.09■□□□□ 0.33
TOP3B-214ENST00000457270 API5Q9BZZ5 524 aaKnown RBP17.09■□□□□ 0.33
TOP3B-214ENST00000457270 TPM3P06753 285 aa17.08■□□□□ 0.32
TOP3B-214ENST00000457270 CHAF1AQ13111 956 aaPredicted RBP17.08■□□□□ 0.32
TOP3B-214ENST00000457270 LRRC7Q96NW7 1537 aa17.08■□□□□ 0.32
TOP3B-214ENST00000457270 FCHSD2O94868 740 aa17.07■□□□□ 0.32
TOP3B-214ENST00000457270 TMEM87AQ8NBN3 555 aa17.07■□□□□ 0.32
TOP3B-214ENST00000457270 KIAA1524Q8TCG1 905 aa17.07■□□□□ 0.32
TOP3B-214ENST00000457270 DIAPH1O60610 1272 aaKnown RBP17.07■□□□□ 0.32
TOP3B-214ENST00000457270 FOXD4L5Q5VV16 416 aaPredicted RBP17.07■□□□□ 0.32
TOP3B-214ENST00000457270 C16orf71Q8IYS4 520 aaPredicted RBP17.07■□□□□ 0.32
TOP3B-214ENST00000457270 C17orf53Q8N3J3 647 aaPredicted RBP17.07■□□□□ 0.32
TOP3B-214ENST00000457270 FOXD4L4Q8WXT5 416 aaPredicted RBP17.07■□□□□ 0.32
TOP3B-214ENST00000457270 FAM135BQ49AJ0 1406 aa17.07■□□□□ 0.32
TOP3B-214ENST00000457270 ARAP3Q8WWN8 1544 aa17.07■□□□□ 0.32
TOP3B-214ENST00000457270 U2AF2P26368 475 aaKnown RBP eCLIP17.07■□□□□ 0.32
TOP3B-214ENST00000457270 CCDC183Q5T5S1 534 aa17.07■□□□□ 0.32
TOP3B-214ENST00000457270 ARHGEF28Q8N1W1 1705 aaKnown RBP17.06■□□□□ 0.32
TOP3B-214ENST00000457270 KCNJ4P48050 445 aa17.06■□□□□ 0.32
TOP3B-214ENST00000457270 IRX5P78411 483 aaPredicted RBP17.06■□□□□ 0.32
TOP3B-214ENST00000457270 SYCP1Q15431 976 aa17.06■□□□□ 0.32
TOP3B-214ENST00000457270 ANKRD44Q8N8A2 993 aa17.06■□□□□ 0.32
TOP3B-214ENST00000457270 OGFRQ9NZT2 677 aa17.06■□□□□ 0.32
TOP3B-214ENST00000457270 RIOK3O14730 519 aaKnown RBP17.05■□□□□ 0.32
TOP3B-214ENST00000457270 KDM4AO75164 1064 aa17.05■□□□□ 0.32
TOP3B-214ENST00000457270 NEK4P51957 841 aa17.05■□□□□ 0.32
TOP3B-214ENST00000457270 A0A1W2PP64 1363 aa17.05■□□□□ 0.32
TOP3B-214ENST00000457270 ATP10DQ9P241 1426 aa17.05■□□□□ 0.32
TOP3B-214ENST00000457270 ATP7AQ04656 1500 aa17.05■□□□□ 0.32
TOP3B-214ENST00000457270 GLI2P10070 1586 aa17.05■□□□□ 0.32
TOP3B-214ENST00000457270 RTL1A6NKG5 1358 aa17.04■□□□□ 0.32
TOP3B-214ENST00000457270 GADD45BO75293 160 aaPredicted RBP17.04■□□□□ 0.32
TOP3B-214ENST00000457270 USP48Q86UV5 1035 aa17.04■□□□□ 0.32
TOP3B-214ENST00000457270 IFT57Q9NWB7 429 aa17.04■□□□□ 0.32
TOP3B-214ENST00000457270 ASXL2Q76L83 1435 aa17.04■□□□□ 0.32
TOP3B-214ENST00000457270 TSPYL6Q8N831 410 aa17.04■□□□□ 0.32
TOP3B-214ENST00000457270 LMTK2Q8IWU2 1503 aa17.04■□□□□ 0.32
TOP3B-214ENST00000457270 GNAI1P63096 354 aa17.04■□□□□ 0.32
TOP3B-214ENST00000457270 GABPB1Q06547 395 aaPredicted RBP17.04■□□□□ 0.32
TOP3B-214ENST00000457270 RPAP2Q8IXW5 612 aaPredicted RBP17.04■□□□□ 0.32
TOP3B-214ENST00000457270 MPNDQ8N594 471 aa17.04■□□□□ 0.32
TOP3B-214ENST00000457270 OTUD7AQ8TE49 926 aaPredicted RBP17.04■□□□□ 0.32
TOP3B-214ENST00000457270 ZNF853P0CG23 659 aa17.03■□□□□ 0.32
TOP3B-214ENST00000457270 MX1P20591 662 aa17.03■□□□□ 0.32
TOP3B-214ENST00000457270 IL17RAQ96F46 866 aa17.03■□□□□ 0.32
TOP3B-214ENST00000457270 AFAP1Q8N556 730 aa17.03■□□□□ 0.32
TOP3B-214ENST00000457270 ZFYVE9O95405 1425 aa17.03■□□□□ 0.32
TOP3B-214ENST00000457270 WDR33Q9C0J8 1336 aaKnown RBP17.02■□□□□ 0.32
TOP3B-214ENST00000457270 ANAPC15P60006 121 aa17.02■□□□□ 0.31
TOP3B-214ENST00000457270 GGNBP2Q9H3C7 697 aa17.02■□□□□ 0.31
TOP3B-214ENST00000457270 KIF3BO15066 747 aa17.01■□□□□ 0.31
TOP3B-214ENST00000457270 OSBPL3Q9H4L5 887 aa17.01■□□□□ 0.31
TOP3B-214ENST00000457270 HCLS1P14317 486 aaPredicted RBP17.01■□□□□ 0.31
TOP3B-214ENST00000457270 NFE2L2Q16236 605 aa17.01■□□□□ 0.31
TOP3B-214ENST00000457270 TMEM132EQ6IEE7 984 aa17.01■□□□□ 0.31
TOP3B-214ENST00000457270 KCNF1Q9H3M0 494 aa17.01■□□□□ 0.31
TOP3B-214ENST00000457270 ABCA9Q8IUA7 1624 aa17■□□□□ 0.31
TOP3B-214ENST00000457270 RGS12O14924 1447 aa17■□□□□ 0.31
TOP3B-214ENST00000457270 TWISTNBQ3B726 338 aaPredicted RBP17■□□□□ 0.31
TOP3B-214ENST00000457270 CHMP4AQ9BY43 222 aa17■□□□□ 0.31
TOP3B-214ENST00000457270 RPAP1Q9BWH6 1393 aaPredicted RBP17■□□□□ 0.31
TOP3B-214ENST00000457270 RPGRIP1LQ68CZ1 1315 aa17■□□□□ 0.31
TOP3B-214ENST00000457270 FYB1O15117 783 aa17■□□□□ 0.31
TOP3B-214ENST00000457270 DNAJC2Q99543 621 aaKnown RBP17■□□□□ 0.31
TOP3B-214ENST00000457270 FUCA2Q9BTY2 467 aa16.99■□□□□ 0.31
TOP3B-214ENST00000457270 MBIPQ9NS73 344 aa16.99■□□□□ 0.31
TOP3B-214ENST00000457270 PYCARDQ9ULZ3 195 aa16.99■□□□□ 0.31
TOP3B-214ENST00000457270 ARHGEF40Q8TER5 1519 aa16.99■□□□□ 0.31
TOP3B-214ENST00000457270 ATAD2Q6PL18 1390 aa16.99■□□□□ 0.31
TOP3B-214ENST00000457270 SMARCA5O60264 1052 aaPredicted RBP16.99■□□□□ 0.31
TOP3B-214ENST00000457270 MCCP23508 829 aa16.99■□□□□ 0.31
TOP3B-214ENST00000457270 PRKAR2BP31323 418 aa16.99■□□□□ 0.31
TOP3B-214ENST00000457270 CEP85Q6P2H3 762 aa16.99■□□□□ 0.31
TOP3B-214ENST00000457270 CCDC66A2RUB6 948 aa16.98■□□□□ 0.31
TOP3B-214ENST00000457270 GDPD2Q9HCC8 539 aa16.98■□□□□ 0.31
TOP3B-214ENST00000457270 CABP2Q9NPB3 220 aa16.98■□□□□ 0.31
TOP3B-214ENST00000457270 GOLGA6L6A8MZA4 724 aa16.98■□□□□ 0.31
TOP3B-214ENST00000457270 NCBP1Q09161 790 aaKnown RBP16.98■□□□□ 0.31
TOP3B-214ENST00000457270 UBE2HP62256 183 aa16.98■□□□□ 0.31
TOP3B-214ENST00000457270 CTNNA3Q9UI47 895 aa16.98■□□□□ 0.31
TOP3B-214ENST00000457270 SSH2Q76I76 1423 aa16.97■□□□□ 0.31
TOP3B-214ENST00000457270 ZCCHC11Q5TAX3 1644 aaKnown RBP16.97■□□□□ 0.31
TOP3B-214ENST00000457270 IRX3P78415 501 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms