RNA–Protein interactions for RNA: ENST00000456608.1

CASC4P1-201, Transcript of cancer susceptibility 4 pseudogene 1, humanhuman

BASIC

Gene CASC4P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4P1-201ENST00000456608 IFT57Q9NWB7 429 aa16.96■□□□□ 0.3
CASC4P1-201ENST00000456608 PLEKHG2Q9H7P9 1386 aa16.95■□□□□ 0.3
CASC4P1-201ENST00000456608 PKD1L3Q7Z443 1732 aa16.95■□□□□ 0.3
CASC4P1-201ENST00000456608 CSB-PGBD3P0DP91 1061 aa16.95■□□□□ 0.3
CASC4P1-201ENST00000456608 KCNA4P22459 653 aa16.95■□□□□ 0.3
CASC4P1-201ENST00000456608 RRP1P56182 461 aaKnown RBP16.95■□□□□ 0.3
CASC4P1-201ENST00000456608 GNAI1P63096 354 aa16.95■□□□□ 0.3
CASC4P1-201ENST00000456608 DCTN1Q14203 1278 aa16.95■□□□□ 0.3
CASC4P1-201ENST00000456608 TSR2Q969E8 191 aaKnown RBP16.95■□□□□ 0.3
CASC4P1-201ENST00000456608 NLRP2Q9NX02 1062 aa16.95■□□□□ 0.3
CASC4P1-201ENST00000456608 WDR17Q8IZU2 1322 aa16.94■□□□□ 0.3
CASC4P1-201ENST00000456608 MAP3K5Q99683 1374 aa16.94■□□□□ 0.3
CASC4P1-201ENST00000456608 CRB1P82279 1406 aa16.94■□□□□ 0.3
CASC4P1-201ENST00000456608 PLEKHO1Q53GL0 409 aaPredicted RBP16.94■□□□□ 0.3
CASC4P1-201ENST00000456608 PARP4Q9UKK3 1724 aaKnown RBP16.93■□□□□ 0.3
CASC4P1-201ENST00000456608 PLCH1Q4KWH8 1693 aa16.93■□□□□ 0.3
CASC4P1-201ENST00000456608 GNAT3A8MTJ3 354 aa16.93■□□□□ 0.3
CASC4P1-201ENST00000456608 CT47B1P0C2W7 299 aaPredicted RBP16.93■□□□□ 0.3
CASC4P1-201ENST00000456608 AMOTQ4VCS5 1084 aa16.93■□□□□ 0.3
CASC4P1-201ENST00000456608 MCM10Q7L590 875 aa16.93■□□□□ 0.3
CASC4P1-201ENST00000456608 CFAP44Q96MT7 982 aa16.93■□□□□ 0.3
CASC4P1-201ENST00000456608 ADAMTS7Q9UKP4 1686 aa16.92■□□□□ 0.3
CASC4P1-201ENST00000456608 MEGF6O75095 1541 aa16.92■□□□□ 0.3
CASC4P1-201ENST00000456608 IRX6P78412 446 aaPredicted RBP16.92■□□□□ 0.3
CASC4P1-201ENST00000456608 EXOSC9Q06265 439 aaKnown RBP16.92■□□□□ 0.3
CASC4P1-201ENST00000456608 RTF1Q92541 710 aaKnown RBP16.92■□□□□ 0.3
CASC4P1-201ENST00000456608 ERICH6BQ5W0A0 696 aa16.91■□□□□ 0.3
CASC4P1-201ENST00000456608 NRAPQ86VF7 1730 aa16.9■□□□□ 0.3
CASC4P1-201ENST00000456608 RAPGEF4Q8WZA2 1011 aa16.9■□□□□ 0.3
CASC4P1-201ENST00000456608 MBIPQ9NS73 344 aa16.9■□□□□ 0.3
CASC4P1-201ENST00000456608 LAS1LQ9Y4W2 734 aaKnown RBP16.9■□□□□ 0.3
CASC4P1-201ENST00000456608 SCN11AQ9UI33 1791 aa16.89■□□□□ 0.29
CASC4P1-201ENST00000456608 CHL1O00533 1208 aa16.89■□□□□ 0.29
CASC4P1-201ENST00000456608 TATP17735 454 aaPredicted RBP16.89■□□□□ 0.29
CASC4P1-201ENST00000456608 AKAP4Q5JQC9 854 aa16.89■□□□□ 0.29
CASC4P1-201ENST00000456608 ZNF530Q6P9A1 599 aaPredicted RBP16.89■□□□□ 0.29
CASC4P1-201ENST00000456608 IL17REQ8NFR9 667 aa16.89■□□□□ 0.29
CASC4P1-201ENST00000456608 CARD10Q9BWT7 1032 aa16.89■□□□□ 0.29
CASC4P1-201ENST00000456608 SIPA1L3O60292 1781 aaPredicted RBP16.89■□□□□ 0.29
CASC4P1-201ENST00000456608 CEMIPQ8WUJ3 1361 aa16.88■□□□□ 0.29
CASC4P1-201ENST00000456608 RARSP54136 660 aaKnown RBP16.88■□□□□ 0.29
CASC4P1-201ENST00000456608 TOM1L2Q6ZVM7 507 aa16.88■□□□□ 0.29
CASC4P1-201ENST00000456608 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.88■□□□□ 0.29
CASC4P1-201ENST00000456608 NWD2Q9ULI1 1742 aa16.88■□□□□ 0.29
CASC4P1-201ENST00000456608 WNK3Q9BYP7 1800 aa16.87■□□□□ 0.29
CASC4P1-201ENST00000456608 SHANK3Q9BYB0 1731 aa16.87■□□□□ 0.29
CASC4P1-201ENST00000456608 OVOS2A0A0G2JMS6 1433 aa16.87■□□□□ 0.29
CASC4P1-201ENST00000456608 KDM3BQ7LBC6 1761 aa16.87■□□□□ 0.29
CASC4P1-201ENST00000456608 JCADQ9P266 1359 aa16.86■□□□□ 0.29
CASC4P1-201ENST00000456608 BCAR3O75815 825 aa16.86■□□□□ 0.29
CASC4P1-201ENST00000456608 EVA1CP58658 441 aa16.86■□□□□ 0.29
CASC4P1-201ENST00000456608 LARP1Q6PKG0 1096 aaKnown RBP16.86■□□□□ 0.29
CASC4P1-201ENST00000456608 STRN4Q9NRL3 753 aa16.86■□□□□ 0.29
CASC4P1-201ENST00000456608 BTG4Q9NY30 223 aa16.86■□□□□ 0.29
CASC4P1-201ENST00000456608 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.85■□□□□ 0.29
CASC4P1-201ENST00000456608 PLIN1O60240 522 aa16.84■□□□□ 0.29
CASC4P1-201ENST00000456608 C1orf141Q5JVX7 400 aa16.84■□□□□ 0.29
CASC4P1-201ENST00000456608 BABAM1Q9NWV8 329 aa16.84■□□□□ 0.29
CASC4P1-201ENST00000456608 SPG7Q9UQ90 795 aa16.84■□□□□ 0.29
CASC4P1-201ENST00000456608 RNMTO43148 476 aaKnown RBP16.83■□□□□ 0.28
CASC4P1-201ENST00000456608 ZNF428Q96B54 188 aa16.83■□□□□ 0.28
CASC4P1-201ENST00000456608 LGR6Q9HBX8 967 aa16.83■□□□□ 0.28
CASC4P1-201ENST00000456608 VAMP4O75379 141 aa16.82■□□□□ 0.28
CASC4P1-201ENST00000456608 ADAMTS2O95450 1211 aa16.82■□□□□ 0.28
CASC4P1-201ENST00000456608 TAF7Q15545 349 aaPredicted RBP16.82■□□□□ 0.28
CASC4P1-201ENST00000456608 C8orf58Q8NAV2 365 aa16.82■□□□□ 0.28
CASC4P1-201ENST00000456608 SLIT2O94813 1529 aa16.81■□□□□ 0.28
CASC4P1-201ENST00000456608 NUTM2BA6NNL0 878 aaPredicted RBP16.81■□□□□ 0.28
CASC4P1-201ENST00000456608 NUTM2EB1AL46 878 aaPredicted RBP16.81■□□□□ 0.28
CASC4P1-201ENST00000456608 PHKG2P15735 406 aa16.81■□□□□ 0.28
CASC4P1-201ENST00000456608 ALDH1L2Q3SY69 923 aa16.81■□□□□ 0.28
CASC4P1-201ENST00000456608 MPRIPQ6WCQ1 1025 aa16.81■□□□□ 0.28
CASC4P1-201ENST00000456608 NUTM2AQ8IVF1 878 aaPredicted RBP16.81■□□□□ 0.28
CASC4P1-201ENST00000456608 TSPYL6Q8N831 410 aa16.81■□□□□ 0.28
CASC4P1-201ENST00000456608 TSPYL4Q9UJ04 414 aa16.81■□□□□ 0.28
CASC4P1-201ENST00000456608 IL2RBP14784 551 aa16.8■□□□□ 0.28
CASC4P1-201ENST00000456608 TWISTNBQ3B726 338 aaPredicted RBP16.8■□□□□ 0.28
CASC4P1-201ENST00000456608 IFNL2Q8IZJ0 200 aa16.8■□□□□ 0.28
CASC4P1-201ENST00000456608 SSH1Q8WYL5 1049 aa16.8■□□□□ 0.28
CASC4P1-201ENST00000456608 MIS18AQ9NYP9 233 aa16.8■□□□□ 0.28
CASC4P1-201ENST00000456608 DISP2A7MBM2 1401 aa16.8■□□□□ 0.28
CASC4P1-201ENST00000456608 KDM6AO15550 1401 aaPredicted RBP16.8■□□□□ 0.28
CASC4P1-201ENST00000456608 CYP27B1O15528 508 aa16.79■□□□□ 0.28
CASC4P1-201ENST00000456608 MRC1P22897 1456 aa16.79■□□□□ 0.28
CASC4P1-201ENST00000456608 CACNA1FO60840 1977 aa16.79■□□□□ 0.28
CASC4P1-201ENST00000456608 BRPF1P55201 1214 aaPredicted RBP16.78■□□□□ 0.28
CASC4P1-201ENST00000456608 C20orf194Q5TEA3 1177 aa16.78■□□□□ 0.28
CASC4P1-201ENST00000456608 ZCRB1Q8TBF4 217 aaKnown RBP16.78■□□□□ 0.28
CASC4P1-201ENST00000456608 BCL2L13Q9BXK5 485 aa16.78■□□□□ 0.28
CASC4P1-201ENST00000456608 SMC4Q9NTJ3 1288 aa16.78■□□□□ 0.28
CASC4P1-201ENST00000456608 PPP4R2Q9NY27 417 aa16.78■□□□□ 0.28
CASC4P1-201ENST00000456608 SPATA31A6Q5VVP1 1343 aa16.78■□□□□ 0.28
CASC4P1-201ENST00000456608 ELL2O00472 640 aaPredicted RBP16.77■□□□□ 0.28
CASC4P1-201ENST00000456608 TEFQ10587 303 aa16.77■□□□□ 0.28
CASC4P1-201ENST00000456608 EXOC6Q8TAG9 804 aa16.77■□□□□ 0.28
CASC4P1-201ENST00000456608 PCDH11XQ9BZA7 1347 aa16.77■□□□□ 0.27
CASC4P1-201ENST00000456608 PCDH11YQ9BZA8 1340 aa16.77■□□□□ 0.27
CASC4P1-201ENST00000456608 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.76■□□□□ 0.27
CASC4P1-201ENST00000456608 HSP90AB1P08238 724 aaKnown RBP16.76■□□□□ 0.27
CASC4P1-201ENST00000456608 HSPA1LP34931 641 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms