RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 ZBTB7CA1YPR0 619 aa15.63■□□□□ 0.09
LINC00959-201ENST00000456581 CHD2O14647 1828 aaKnown RBP15.62■□□□□ 0.09
LINC00959-201ENST00000456581 CFAP44Q96MT7 982 aa15.62■□□□□ 0.09
LINC00959-201ENST00000456581 ORAI2Q96SN7 254 aa15.62■□□□□ 0.09
LINC00959-201ENST00000456581 LNPKQ9C0E8 428 aa15.62■□□□□ 0.09
LINC00959-201ENST00000456581 PIK3R4Q99570 1358 aa15.62■□□□□ 0.09
LINC00959-201ENST00000456581 MTHFSDQ2M296 383 aaKnown RBP15.61■□□□□ 0.09
LINC00959-201ENST00000456581 TWISTNBQ3B726 338 aaPredicted RBP15.61■□□□□ 0.09
LINC00959-201ENST00000456581 FOXD4L1Q9NU39 408 aa15.61■□□□□ 0.09
LINC00959-201ENST00000456581 USHBP1Q8N6Y0 703 aa15.61■□□□□ 0.09
LINC00959-201ENST00000456581 FMN2Q9NZ56 1722 aa15.6■□□□□ 0.09
LINC00959-201ENST00000456581 FLT4P35916 1363 aa15.6■□□□□ 0.09
LINC00959-201ENST00000456581 SBNO1A3KN83 1393 aa15.59■□□□□ 0.09
LINC00959-201ENST00000456581 MRPL50Q8N5N7 158 aaKnown RBP15.59■□□□□ 0.09
LINC00959-201ENST00000456581 HOXC9P31274 260 aa15.59■□□□□ 0.09
LINC00959-201ENST00000456581 ANKARQ7Z5J8 1434 aa15.59■□□□□ 0.09
LINC00959-201ENST00000456581 LMOD3Q0VAK6 560 aa15.58■□□□□ 0.09
LINC00959-201ENST00000456581 FAM43AQ8N2R8 423 aa15.58■□□□□ 0.09
LINC00959-201ENST00000456581 NPHP4O75161 1426 aaPredicted RBP15.58■□□□□ 0.09
LINC00959-201ENST00000456581 CALD1Q05682 793 aaKnown RBP15.58■□□□□ 0.08
LINC00959-201ENST00000456581 PSME1Q06323 249 aa15.58■□□□□ 0.08
LINC00959-201ENST00000456581 ALDH1L2Q3SY69 923 aa15.58■□□□□ 0.08
LINC00959-201ENST00000456581 KIF16BQ96L93 1317 aa15.58■□□□□ 0.08
LINC00959-201ENST00000456581 LMOD2Q6P5Q4 547 aa15.58■□□□□ 0.08
LINC00959-201ENST00000456581 STRCQ7RTU9 1775 aa15.57■□□□□ 0.08
LINC00959-201ENST00000456581 MCM4P33991 863 aa15.57■□□□□ 0.08
LINC00959-201ENST00000456581 DDX19BQ9UMR2 479 aa15.57■□□□□ 0.08
LINC00959-201ENST00000456581 RGPD1P0DJD0 1748 aa15.56■□□□□ 0.08
LINC00959-201ENST00000456581 IPO8O15397 1037 aaKnown RBP15.56■□□□□ 0.08
LINC00959-201ENST00000456581 MARF1Q9Y4F3 1742 aaKnown RBP15.56■□□□□ 0.08
LINC00959-201ENST00000456581 ZBTB40Q9NUA8 1239 aa15.56■□□□□ 0.08
LINC00959-201ENST00000456581 CD2BP2O95400 341 aaKnown RBP15.55■□□□□ 0.08
LINC00959-201ENST00000456581 PROSER2Q86WR7 435 aaPredicted RBP15.55■□□□□ 0.08
LINC00959-201ENST00000456581 RBM42Q9BTD8 480 aaKnown RBP15.55■□□□□ 0.08
LINC00959-201ENST00000456581 IGSF1Q8N6C5 1336 aa15.55■□□□□ 0.08
LINC00959-201ENST00000456581 CHL1O00533 1208 aa15.54■□□□□ 0.08
LINC00959-201ENST00000456581 AAMPQ13685 434 aa15.54■□□□□ 0.08
LINC00959-201ENST00000456581 ADGRL3Q9HAR2 1447 aa15.54■□□□□ 0.08
LINC00959-201ENST00000456581 ARHGEF10O15013 1369 aa15.54■□□□□ 0.08
LINC00959-201ENST00000456581 HDAC1Q13547 482 aaPredicted RBP15.53■□□□□ 0.08
LINC00959-201ENST00000456581 DDX17Q92841 729 aaKnown RBP15.53■□□□□ 0.08
LINC00959-201ENST00000456581 HSPA2P54652 639 aa15.53■□□□□ 0.08
LINC00959-201ENST00000456581 TRAK2O60296 914 aa15.53■□□□□ 0.08
LINC00959-201ENST00000456581 SMC5Q8IY18 1101 aa15.53■□□□□ 0.08
LINC00959-201ENST00000456581 KDRP35968 1356 aa15.52■□□□□ 0.07
LINC00959-201ENST00000456581 RTF1Q92541 710 aaKnown RBP15.51■□□□□ 0.07
LINC00959-201ENST00000456581 LRRC59Q96AG4 307 aaKnown RBP15.51■□□□□ 0.07
LINC00959-201ENST00000456581 CRB1P82279 1406 aa15.51■□□□□ 0.07
LINC00959-201ENST00000456581 ANKRD45Q5TZF3 282 aa15.51■□□□□ 0.07
LINC00959-201ENST00000456581 GAS2L3Q86XJ1 694 aa15.51■□□□□ 0.07
LINC00959-201ENST00000456581 ZBTB7BO15156 539 aaPredicted RBP15.5■□□□□ 0.07
LINC00959-201ENST00000456581 BRPF1P55201 1214 aaPredicted RBP15.5■□□□□ 0.07
LINC00959-201ENST00000456581 GOLGA6L3A6NEY3 463 aa15.5■□□□□ 0.07
LINC00959-201ENST00000456581 NBPF6Q5VWK0 638 aa15.5■□□□□ 0.07
LINC00959-201ENST00000456581 HSCBQ8IWL3 235 aa15.5■□□□□ 0.07
LINC00959-201ENST00000456581 NECTIN2Q92692 538 aa15.5■□□□□ 0.07
LINC00959-201ENST00000456581 ZNF428Q96B54 188 aa15.5■□□□□ 0.07
LINC00959-201ENST00000456581 NBPF4Q96M43 638 aa15.5■□□□□ 0.07
LINC00959-201ENST00000456581 TSPYL4Q9UJ04 414 aa15.5■□□□□ 0.07
LINC00959-201ENST00000456581 ERBB4Q15303 1308 aa15.5■□□□□ 0.07
LINC00959-201ENST00000456581 FSD2A1L4K1 749 aa15.49■□□□□ 0.07
LINC00959-201ENST00000456581 CHMP5Q9NZZ3 219 aa15.49■□□□□ 0.07
LINC00959-201ENST00000456581 NUCB1Q02818 461 aa15.49■□□□□ 0.07
LINC00959-201ENST00000456581 CHD1LQ86WJ1 897 aa15.49■□□□□ 0.07
LINC00959-201ENST00000456581 NWD1Q149M9 1564 aa15.48■□□□□ 0.07
LINC00959-201ENST00000456581 IL17REQ8NFR9 667 aa15.48■□□□□ 0.07
LINC00959-201ENST00000456581 G2E3Q7L622 706 aa15.47■□□□□ 0.07
LINC00959-201ENST00000456581 SIRT2Q8IXJ6 389 aa15.47■□□□□ 0.07
LINC00959-201ENST00000456581 AK9Q5TCS8 1911 aa15.47■□□□□ 0.07
LINC00959-201ENST00000456581 ABCC4O15439 1325 aa15.47■□□□□ 0.07
LINC00959-201ENST00000456581 LTN1O94822 1766 aa15.47■□□□□ 0.07
LINC00959-201ENST00000456581 IP6K1Q92551 441 aa15.47■□□□□ 0.07
LINC00959-201ENST00000456581 ARHGAP45Q92619 1136 aa15.47■□□□□ 0.07
LINC00959-201ENST00000456581 GCP02774 474 aa15.46■□□□□ 0.07
LINC00959-201ENST00000456581 SLC4A2P04920 1241 aa15.46■□□□□ 0.07
LINC00959-201ENST00000456581 L1TD1Q5T7N2 865 aaKnown RBP15.46■□□□□ 0.07
LINC00959-201ENST00000456581 GAS2L2Q8NHY3 880 aa15.46■□□□□ 0.07
LINC00959-201ENST00000456581 KIF2CQ99661 725 aa15.46■□□□□ 0.07
LINC00959-201ENST00000456581 TNPO1Q92973 898 aaKnown RBP15.46■□□□□ 0.07
LINC00959-201ENST00000456581 GNAT3A8MTJ3 354 aa15.45■□□□□ 0.06
LINC00959-201ENST00000456581 F6X3S4 739 aa15.45■□□□□ 0.06
LINC00959-201ENST00000456581 KRT28Q7Z3Y7 464 aa15.45■□□□□ 0.06
LINC00959-201ENST00000456581 AXIN2Q9Y2T1 843 aa15.45■□□□□ 0.06
LINC00959-201ENST00000456581 CHAMP1Q96JM3 812 aa15.44■□□□□ 0.06
LINC00959-201ENST00000456581 NAP1L5Q96NT1 182 aaPredicted RBP15.44■□□□□ 0.06
LINC00959-201ENST00000456581 NFAT5O94916 1531 aa15.44■□□□□ 0.06
LINC00959-201ENST00000456581 HSP90AB1P08238 724 aaKnown RBP15.44■□□□□ 0.06
LINC00959-201ENST00000456581 ZC3H6P61129 1189 aaKnown RBP15.44■□□□□ 0.06
LINC00959-201ENST00000456581 RGPD2P0DJD1 1756 aa15.44■□□□□ 0.06
LINC00959-201ENST00000456581 APBB1O00213 710 aa15.44■□□□□ 0.06
LINC00959-201ENST00000456581 LGR6Q9HBX8 967 aa15.44■□□□□ 0.06
LINC00959-201ENST00000456581 MSH6P52701 1360 aa15.43■□□□□ 0.06
LINC00959-201ENST00000456581 TBC1D9Q6ZT07 1266 aa15.43■□□□□ 0.06
LINC00959-201ENST00000456581 API5Q9BZZ5 524 aaKnown RBP15.43■□□□□ 0.06
LINC00959-201ENST00000456581 C19orf44Q9H6X5 657 aa15.43■□□□□ 0.06
LINC00959-201ENST00000456581 C16orf71Q8IYS4 520 aaPredicted RBP15.43■□□□□ 0.06
LINC00959-201ENST00000456581 UBE2Q2Q8WVN8 375 aa15.43■□□□□ 0.06
LINC00959-201ENST00000456581 TMEM94Q12767 1356 aa15.43■□□□□ 0.06
LINC00959-201ENST00000456581 RGS12O14924 1447 aa15.43■□□□□ 0.06
LINC00959-201ENST00000456581 HSP90AA1P07900 732 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms