RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 PARD3Q8TEW0 1356 aa24.53■■□□□ 1.52
PDLIM2-215ENST00000456545 MEGF6O75095 1541 aa24.51■■□□□ 1.51
PDLIM2-215ENST00000456545 KCNQ2O43526 872 aa24.51■■□□□ 1.51
PDLIM2-215ENST00000456545 PTF1AQ7RTS3 328 aa24.51■■□□□ 1.51
PDLIM2-215ENST00000456545 PLSCR1O15162 318 aa24.5■■□□□ 1.51
PDLIM2-215ENST00000456545 SYTL4Q96C24 671 aaPredicted RBP24.5■■□□□ 1.51
PDLIM2-215ENST00000456545 ZEB1P37275 1124 aaPredicted RBP24.49■■□□□ 1.51
PDLIM2-215ENST00000456545 MTHFSP49914 203 aa24.49■■□□□ 1.51
PDLIM2-215ENST00000456545 NBPF14Q5TI25 921 aa24.49■■□□□ 1.51
PDLIM2-215ENST00000456545 SPG7Q9UQ90 795 aa24.49■■□□□ 1.51
PDLIM2-215ENST00000456545 PCDH11XQ9BZA7 1347 aa24.47■■□□□ 1.51
PDLIM2-215ENST00000456545 PCDH11YQ9BZA8 1340 aa24.47■■□□□ 1.51
PDLIM2-215ENST00000456545 NPC1L1Q9UHC9 1359 aa24.46■■□□□ 1.51
PDLIM2-215ENST00000456545 PSDA5PKW4 1024 aaPredicted RBP24.46■■□□□ 1.51
PDLIM2-215ENST00000456545 PRIM1P49642 420 aaKnown RBP24.44■■□□□ 1.5
PDLIM2-215ENST00000456545 R3HDM1Q15032 1099 aaKnown RBP24.43■■□□□ 1.5
PDLIM2-215ENST00000456545 IGSF1Q8N6C5 1336 aa24.41■■□□□ 1.5
PDLIM2-215ENST00000456545 NHSQ6T4R5 1651 aa24.41■■□□□ 1.5
PDLIM2-215ENST00000456545 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.41■■□□□ 1.5
PDLIM2-215ENST00000456545 TXNRD1Q16881 649 aa24.4■■□□□ 1.5
PDLIM2-215ENST00000456545 NCAPD2Q15021 1401 aa24.39■■□□□ 1.5
PDLIM2-215ENST00000456545 CYP27B1O15528 508 aa24.39■■□□□ 1.49
PDLIM2-215ENST00000456545 DIAPH1O60610 1272 aaKnown RBP24.39■■□□□ 1.49
PDLIM2-215ENST00000456545 IL13P35225 146 aa24.39■■□□□ 1.49
PDLIM2-215ENST00000456545 PLEKHO1Q53GL0 409 aaPredicted RBP24.39■■□□□ 1.49
PDLIM2-215ENST00000456545 SULT6B1Q6IMI4 303 aa24.39■■□□□ 1.49
PDLIM2-215ENST00000456545 SHANK3Q9BYB0 1731 aa24.38■■□□□ 1.49
PDLIM2-215ENST00000456545 IFNL2Q8IZJ0 200 aa24.37■■□□□ 1.49
PDLIM2-215ENST00000456545 RREB1Q92766 1687 aa24.37■■□□□ 1.49
PDLIM2-215ENST00000456545 PROM2Q8N271 834 aa24.36■■□□□ 1.49
PDLIM2-215ENST00000456545 CFAP53Q96M91 514 aa24.36■■□□□ 1.49
PDLIM2-215ENST00000456545 BTAF1O14981 1849 aa24.35■■□□□ 1.49
PDLIM2-215ENST00000456545 RGPD3A6NKT7 1758 aaPredicted RBP24.35■■□□□ 1.49
PDLIM2-215ENST00000456545 RGPD4Q7Z3J3 1758 aa24.35■■□□□ 1.49
PDLIM2-215ENST00000456545 AMOTQ4VCS5 1084 aa24.35■■□□□ 1.49
PDLIM2-215ENST00000456545 AEBP1Q8IUX7 1158 aa24.35■■□□□ 1.49
PDLIM2-215ENST00000456545 MPRIPQ6WCQ1 1025 aa24.34■■□□□ 1.49
PDLIM2-215ENST00000456545 NUP188Q5SRE5 1749 aa24.34■■□□□ 1.49
PDLIM2-215ENST00000456545 DOT1LQ8TEK3 1739 aa24.34■■□□□ 1.49
PDLIM2-215ENST00000456545 DDX10Q13206 875 aaKnown RBP24.33■■□□□ 1.49
PDLIM2-215ENST00000456545 STK32BQ9NY57 414 aa24.33■■□□□ 1.49
PDLIM2-215ENST00000456545 PKD1L3Q7Z443 1732 aa24.32■■□□□ 1.48
PDLIM2-215ENST00000456545 U2SURPO15042 1029 aaKnown RBP24.32■■□□□ 1.48
PDLIM2-215ENST00000456545 PHKG2P15735 406 aa24.32■■□□□ 1.48
PDLIM2-215ENST00000456545 HMOX1P09601 288 aa24.31■■□□□ 1.48
PDLIM2-215ENST00000456545 NKX1-1Q15270 411 aaPredicted RBP24.31■■□□□ 1.48
PDLIM2-215ENST00000456545 C1orf141Q5JVX7 400 aa24.31■■□□□ 1.48
PDLIM2-215ENST00000456545 ZNF530Q6P9A1 599 aaPredicted RBP24.31■■□□□ 1.48
PDLIM2-215ENST00000456545 HSP90AB1P08238 724 aaKnown RBP24.3■■□□□ 1.48
PDLIM2-215ENST00000456545 PLEKHG2Q9H7P9 1386 aa24.29■■□□□ 1.48
PDLIM2-215ENST00000456545 PPP2R1AP30153 589 aa24.29■■□□□ 1.48
PDLIM2-215ENST00000456545 SLC27A3Q5K4L6 730 aa24.29■■□□□ 1.48
PDLIM2-215ENST00000456545 TMOD3Q9NYL9 352 aa24.28■■□□□ 1.48
PDLIM2-215ENST00000456545 NUDCQ9Y266 331 aa24.28■■□□□ 1.48
PDLIM2-215ENST00000456545 SLC15A2Q16348 729 aa24.26■■□□□ 1.47
PDLIM2-215ENST00000456545 ANO8Q9HCE9 1232 aaPredicted RBP24.26■■□□□ 1.47
PDLIM2-215ENST00000456545 SMARCC1Q92922 1105 aaPredicted RBP24.25■■□□□ 1.47
PDLIM2-215ENST00000456545 DCAF5Q96JK2 942 aa24.25■■□□□ 1.47
PDLIM2-215ENST00000456545 CCNL1Q9UK58 526 aaPredicted RBP24.25■■□□□ 1.47
PDLIM2-215ENST00000456545 KDRP35968 1356 aa24.25■■□□□ 1.47
PDLIM2-215ENST00000456545 PIGBQ92521 554 aa24.24■■□□□ 1.47
PDLIM2-215ENST00000456545 LRRC4BQ9NT99 713 aa24.24■■□□□ 1.47
PDLIM2-215ENST00000456545 HMGB2P26583 209 aaKnown RBP24.23■■□□□ 1.47
PDLIM2-215ENST00000456545 KCNQ4P56696 695 aa24.23■■□□□ 1.47
PDLIM2-215ENST00000456545 ITGB4P16144 1822 aa24.21■■□□□ 1.47
PDLIM2-215ENST00000456545 ERVV-2B6SEH9 535 aa24.21■■□□□ 1.47
PDLIM2-215ENST00000456545 CABP4P57796 275 aa24.21■■□□□ 1.47
PDLIM2-215ENST00000456545 PALLDQ8WX93 1383 aa24.19■■□□□ 1.46
PDLIM2-215ENST00000456545 U2AF1L5P0DN76 240 aaPredicted RBP24.19■■□□□ 1.46
PDLIM2-215ENST00000456545 U2AF1Q01081 240 aaKnown RBP eCLIP24.19■■□□□ 1.46
PDLIM2-215ENST00000456545 AKAP4Q5JQC9 854 aa24.19■■□□□ 1.46
PDLIM2-215ENST00000456545 RALBP1Q15311 655 aa24.18■■□□□ 1.46
PDLIM2-215ENST00000456545 COL3A1P02461 1466 aaPredicted RBP24.18■■□□□ 1.46
PDLIM2-215ENST00000456545 TOGARAM1Q9Y4F4 1720 aa24.18■■□□□ 1.46
PDLIM2-215ENST00000456545 SPON1Q9HCB6 807 aa24.17■■□□□ 1.46
PDLIM2-215ENST00000456545 TFCP2L1Q9NZI6 479 aa24.17■■□□□ 1.46
PDLIM2-215ENST00000456545 LY75O60449 1722 aa24.16■■□□□ 1.46
PDLIM2-215ENST00000456545 MTHFSDQ2M296 383 aaKnown RBP24.16■■□□□ 1.46
PDLIM2-215ENST00000456545 ASAP1Q9ULH1 1129 aa24.16■■□□□ 1.46
PDLIM2-215ENST00000456545 ZNF827Q17R98 1081 aa24.15■■□□□ 1.46
PDLIM2-215ENST00000456545 ZBTB7AO95365 584 aa24.13■■□□□ 1.45
PDLIM2-215ENST00000456545 PRKAR2BP31323 418 aa24.13■■□□□ 1.45
PDLIM2-215ENST00000456545 NFATC2IPQ8NCF5 419 aa24.13■■□□□ 1.45
PDLIM2-215ENST00000456545 GAS2L2Q8NHY3 880 aa24.13■■□□□ 1.45
PDLIM2-215ENST00000456545 AKT1S1Q96B36 256 aa24.13■■□□□ 1.45
PDLIM2-215ENST00000456545 ATG3Q9NT62 314 aa24.13■■□□□ 1.45
PDLIM2-215ENST00000456545 PPP1R1BQ9UD71 204 aaPredicted RBP24.13■■□□□ 1.45
PDLIM2-215ENST00000456545 LOC102724428A0A0B4J2F2 783 aa24.12■■□□□ 1.45
PDLIM2-215ENST00000456545 SIK1P57059 783 aa24.12■■□□□ 1.45
PDLIM2-215ENST00000456545 RBM42Q9BTD8 480 aaKnown RBP24.12■■□□□ 1.45
PDLIM2-215ENST00000456545 PDGFDQ9GZP0 370 aaPredicted RBP24.12■■□□□ 1.45
PDLIM2-215ENST00000456545 KDM6AO15550 1401 aaPredicted RBP24.11■■□□□ 1.45
PDLIM2-215ENST00000456545 MSH5O43196 834 aa24.11■■□□□ 1.45
PDLIM2-215ENST00000456545 NEFMP07197 916 aa24.11■■□□□ 1.45
PDLIM2-215ENST00000456545 ATP6V1AP38606 617 aa24.11■■□□□ 1.45
PDLIM2-215ENST00000456545 ATF5Q9Y2D1 282 aaPredicted RBP24.11■■□□□ 1.45
PDLIM2-215ENST00000456545 LRP5O75197 1615 aa24.1■■□□□ 1.45
PDLIM2-215ENST00000456545 FCHSD2O94868 740 aa24.1■■□□□ 1.45
PDLIM2-215ENST00000456545 LGR6Q9HBX8 967 aa24.1■■□□□ 1.45
PDLIM2-215ENST00000456545 RNMTO43148 476 aaKnown RBP24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms