RNA–Protein interactions for RNA: ENST00000456517.2

HIPK3-203, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HIPK3, Length 7,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-203ENST00000456517 TRAK2O60296 914 aa17.1■□□□□ 0.33
HIPK3-203ENST00000456517 WDR78Q5VTH9 848 aa17.1■□□□□ 0.33
HIPK3-203ENST00000456517 CCDC192P0DO97 292 aa17.1■□□□□ 0.33
HIPK3-203ENST00000456517 SLC52A1Q9NWF4 448 aa17.1■□□□□ 0.33
HIPK3-203ENST00000456517 METTL24Q5JXM2 366 aa17.1■□□□□ 0.33
HIPK3-203ENST00000456517 POGZQ7Z3K3 1410 aa17.1■□□□□ 0.33
HIPK3-203ENST00000456517 RRS1Q15050 365 aaKnown RBP17.1■□□□□ 0.33
HIPK3-203ENST00000456517 TMEM87AQ8NBN3 555 aa17.1■□□□□ 0.33
HIPK3-203ENST00000456517 SMARCA4P51532 1647 aa17.1■□□□□ 0.33
HIPK3-203ENST00000456517 POLR3DP05423 398 aaPredicted RBP17.1■□□□□ 0.33
HIPK3-203ENST00000456517 ANKIB1Q9P2G1 1089 aa17.1■□□□□ 0.33
HIPK3-203ENST00000456517 EZRP15311 586 aaKnown RBP17.1■□□□□ 0.33
HIPK3-203ENST00000456517 CDCA7LQ96GN5 454 aa17.1■□□□□ 0.33
HIPK3-203ENST00000456517 SEC63Q9UGP8 760 aaKnown RBP17.09■□□□□ 0.33
HIPK3-203ENST00000456517 CAVIN4Q5BKX8 364 aa17.09■□□□□ 0.33
HIPK3-203ENST00000456517 TAX1BP1Q86VP1 789 aa17.09■□□□□ 0.33
HIPK3-203ENST00000456517 CEP57L1Q8IYX8 460 aa17.09■□□□□ 0.33
HIPK3-203ENST00000456517 PTCD1O75127 700 aaKnown RBP17.09■□□□□ 0.33
HIPK3-203ENST00000456517 CWC27Q6UX04 472 aaKnown RBP17.09■□□□□ 0.33
HIPK3-203ENST00000456517 POTEJP0CG39 1038 aa17.08■□□□□ 0.33
HIPK3-203ENST00000456517 PPP4R3AQ6IN85 833 aa17.08■□□□□ 0.33
HIPK3-203ENST00000456517 WASF1Q92558 559 aa17.08■□□□□ 0.33
HIPK3-203ENST00000456517 CENPHQ9H3R5 247 aa17.08■□□□□ 0.33
HIPK3-203ENST00000456517 BCAR3O75815 825 aa17.08■□□□□ 0.32
HIPK3-203ENST00000456517 TMOD3Q9NYL9 352 aa17.08■□□□□ 0.32
HIPK3-203ENST00000456517 GBP2P32456 591 aaPredicted RBP17.08■□□□□ 0.32
HIPK3-203ENST00000456517 DHX8Q14562 1220 aaKnown RBP17.08■□□□□ 0.32
HIPK3-203ENST00000456517 MKNK2Q9HBH9 465 aa17.08■□□□□ 0.32
HIPK3-203ENST00000456517 SPDYE4A6NLX3 237 aa17.08■□□□□ 0.32
HIPK3-203ENST00000456517 NFKBIBQ15653 356 aa17.08■□□□□ 0.32
HIPK3-203ENST00000456517 WDR33Q9C0J8 1336 aaKnown RBP17.08■□□□□ 0.32
HIPK3-203ENST00000456517 FAM177A1Q8N128 213 aaPredicted RBP17.07■□□□□ 0.32
HIPK3-203ENST00000456517 IMMTQ16891 758 aaKnown RBP17.07■□□□□ 0.32
HIPK3-203ENST00000456517 PPP1R12BO60237 982 aaPredicted RBP17.07■□□□□ 0.32
HIPK3-203ENST00000456517 CBFA2T2O43439 604 aa17.07■□□□□ 0.32
HIPK3-203ENST00000456517 JAKMIP1Q96N16 626 aaKnown RBP17.06■□□□□ 0.32
HIPK3-203ENST00000456517 KRT32Q14532 448 aa17.06■□□□□ 0.32
HIPK3-203ENST00000456517 PLCD4Q9BRC7 762 aa17.06■□□□□ 0.32
HIPK3-203ENST00000456517 PDRG1Q9NUG6 133 aa17.06■□□□□ 0.32
HIPK3-203ENST00000456517 CFAP45Q9UL16 551 aa17.06■□□□□ 0.32
HIPK3-203ENST00000456517 PDE3AQ14432 1141 aa17.06■□□□□ 0.32
HIPK3-203ENST00000456517 ADAMTS2O95450 1211 aa17.05■□□□□ 0.32
HIPK3-203ENST00000456517 MINDY4BA8MYZ0 360 aa17.05■□□□□ 0.32
HIPK3-203ENST00000456517 LEKR1Q6ZMV7 388 aa17.05■□□□□ 0.32
HIPK3-203ENST00000456517 KCNH5Q8NCM2 988 aa17.05■□□□□ 0.32
HIPK3-203ENST00000456517 IL1RAPL2Q9NP60 686 aa17.05■□□□□ 0.32
HIPK3-203ENST00000456517 GNAT3A8MTJ3 354 aa17.05■□□□□ 0.32
HIPK3-203ENST00000456517 EIF5P55010 431 aaKnown RBP17.05■□□□□ 0.32
HIPK3-203ENST00000456517 DZIP1Q86YF9 867 aaKnown RBP17.05■□□□□ 0.32
HIPK3-203ENST00000456517 IGF1RP08069 1367 aa17.05■□□□□ 0.32
HIPK3-203ENST00000456517 FANCIQ9NVI1 1328 aa17.05■□□□□ 0.32
HIPK3-203ENST00000456517 SPATA32Q96LK8 384 aa17.04■□□□□ 0.32
HIPK3-203ENST00000456517 AKAP2Q9Y2D5 859 aa17.04■□□□□ 0.32
HIPK3-203ENST00000456517 PRG4Q92954 1404 aaPredicted RBP17.04■□□□□ 0.32
HIPK3-203ENST00000456517 IFIT1P09914 478 aaKnown RBP17.04■□□□□ 0.32
HIPK3-203ENST00000456517 LRRFIP2Q9Y608 721 aaKnown RBP17.04■□□□□ 0.32
HIPK3-203ENST00000456517 NBPF1Q3BBV0 1214 aa17.04■□□□□ 0.32
HIPK3-203ENST00000456517 CEP131Q9UPN4 1083 aa17.04■□□□□ 0.32
HIPK3-203ENST00000456517 ATF7IPQ6VMQ6 1270 aa17.04■□□□□ 0.32
HIPK3-203ENST00000456517 RPGRQ92834 1020 aaKnown RBP17.03■□□□□ 0.32
HIPK3-203ENST00000456517 CETN2P41208 172 aa17.03■□□□□ 0.32
HIPK3-203ENST00000456517 CCDC112Q8NEF3 446 aa17.03■□□□□ 0.32
HIPK3-203ENST00000456517 RAPGEF3O95398 923 aa17.03■□□□□ 0.32
HIPK3-203ENST00000456517 JAKMIP3Q5VZ66 844 aa17.03■□□□□ 0.32
HIPK3-203ENST00000456517 ZNF219Q9P2Y4 722 aaPredicted RBP17.02■□□□□ 0.32
HIPK3-203ENST00000456517 ANAPC15P60006 121 aa17.02■□□□□ 0.31
HIPK3-203ENST00000456517 NCOA2Q15596 1464 aa17.02■□□□□ 0.31
HIPK3-203ENST00000456517 KIAA1328Q86T90 577 aa17.02■□□□□ 0.31
HIPK3-203ENST00000456517 GOLGA6L7A0A1B0GV03 622 aa17.02■□□□□ 0.31
HIPK3-203ENST00000456517 CCDC96Q2M329 555 aa17.01■□□□□ 0.31
HIPK3-203ENST00000456517 IQCEQ6IPM2 695 aa17.01■□□□□ 0.31
HIPK3-203ENST00000456517 WDR63Q8IWG1 891 aa17.01■□□□□ 0.31
HIPK3-203ENST00000456517 TAF4BQ92750 862 aa17.01■□□□□ 0.31
HIPK3-203ENST00000456517 MPRIPQ6WCQ1 1025 aa17.01■□□□□ 0.31
HIPK3-203ENST00000456517 NGLY1Q96IV0 654 aa17.01■□□□□ 0.31
HIPK3-203ENST00000456517 ZSCAN31Q96LW9 406 aaPredicted RBP17.01■□□□□ 0.31
HIPK3-203ENST00000456517 ZNF397Q8NF99 534 aaPredicted RBP17■□□□□ 0.31
HIPK3-203ENST00000456517 CHD1LQ86WJ1 897 aa17■□□□□ 0.31
HIPK3-203ENST00000456517 ZNF444Q8N0Y2 327 aaPredicted RBP17■□□□□ 0.31
HIPK3-203ENST00000456517 HFM1A2PYH4 1435 aa17■□□□□ 0.31
HIPK3-203ENST00000456517 CUL5Q93034 780 aa17■□□□□ 0.31
HIPK3-203ENST00000456517 U3KPZ7 1027 aaPredicted RBP17■□□□□ 0.31
HIPK3-203ENST00000456517 K7ELQ4 463 aaPredicted RBP17■□□□□ 0.31
HIPK3-203ENST00000456517 NAPBQ9H115 298 aa17■□□□□ 0.31
HIPK3-203ENST00000456517 KIAA0754O94854 1291 aa16.99■□□□□ 0.31
HIPK3-203ENST00000456517 DDX11Q96FC9 970 aa16.99■□□□□ 0.31
HIPK3-203ENST00000456517 UBA5Q9GZZ9 404 aa16.99■□□□□ 0.31
HIPK3-203ENST00000456517 PPP6R1Q9UPN7 881 aa16.99■□□□□ 0.31
HIPK3-203ENST00000456517 MTERF4Q7Z6M4 381 aaKnown RBP16.99■□□□□ 0.31
HIPK3-203ENST00000456517 UPF3BQ9BZI7 483 aaKnown RBP16.99■□□□□ 0.31
HIPK3-203ENST00000456517 EPB41L2O43491 1005 aaKnown RBP16.99■□□□□ 0.31
HIPK3-203ENST00000456517 ERLIN1O75477 346 aa16.99■□□□□ 0.31
HIPK3-203ENST00000456517 ATAD2Q6PL18 1390 aa16.98■□□□□ 0.31
HIPK3-203ENST00000456517 FAM193AP78312 1265 aa16.98■□□□□ 0.31
HIPK3-203ENST00000456517 NUDT16Q96DE0 195 aaKnown RBP16.98■□□□□ 0.31
HIPK3-203ENST00000456517 MVPQ14764 893 aaKnown RBP16.98■□□□□ 0.31
HIPK3-203ENST00000456517 ERBINQ96RT1 1412 aa16.98■□□□□ 0.31
HIPK3-203ENST00000456517 GRIN2BQ13224 1484 aa16.98■□□□□ 0.31
HIPK3-203ENST00000456517 LARP1Q6PKG0 1096 aaKnown RBP16.98■□□□□ 0.31
HIPK3-203ENST00000456517 MIS18AQ9NYP9 233 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms