RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 ARXQ96QS3 562 aa16.88■□□□□ 0.29
LMCD1-206ENST00000456506 FBLN1P23142 703 aa16.87■□□□□ 0.29
LMCD1-206ENST00000456506 HOXC9P31274 260 aa16.87■□□□□ 0.29
LMCD1-206ENST00000456506 PNPLA7Q6ZV29 1317 aa16.87■□□□□ 0.29
LMCD1-206ENST00000456506 TONSLQ96HA7 1378 aa16.87■□□□□ 0.29
LMCD1-206ENST00000456506 MAP2P11137 1827 aaKnown RBP16.86■□□□□ 0.29
LMCD1-206ENST00000456506 SLC27A3Q5K4L6 730 aa16.86■□□□□ 0.29
LMCD1-206ENST00000456506 UBR3Q6ZT12 1888 aa16.86■□□□□ 0.29
LMCD1-206ENST00000456506 ST20-MTHFSA0A0A6YYL1 179 aa16.85■□□□□ 0.29
LMCD1-206ENST00000456506 DDX54Q8TDD1 881 aaKnown RBP16.85■□□□□ 0.29
LMCD1-206ENST00000456506 RTL1A6NKG5 1358 aa16.85■□□□□ 0.29
LMCD1-206ENST00000456506 LTV1Q96GA3 475 aaPredicted RBP16.84■□□□□ 0.29
LMCD1-206ENST00000456506 PRIM1P49642 420 aaKnown RBP16.83■□□□□ 0.28
LMCD1-206ENST00000456506 KCNQ4P56696 695 aa16.83■□□□□ 0.28
LMCD1-206ENST00000456506 SLC16A10Q8TF71 515 aa16.83■□□□□ 0.28
LMCD1-206ENST00000456506 COG3Q96JB2 828 aa16.82■□□□□ 0.28
LMCD1-206ENST00000456506 C4BP0C0L5 1744 aa16.81■□□□□ 0.28
LMCD1-206ENST00000456506 FYB1O15117 783 aa16.8■□□□□ 0.28
LMCD1-206ENST00000456506 NBPF6Q5VWK0 638 aa16.8■□□□□ 0.28
LMCD1-206ENST00000456506 ZCRB1Q8TBF4 217 aaKnown RBP16.8■□□□□ 0.28
LMCD1-206ENST00000456506 NBPF4Q96M43 638 aa16.8■□□□□ 0.28
LMCD1-206ENST00000456506 NCAPD2Q15021 1401 aa16.79■□□□□ 0.28
LMCD1-206ENST00000456506 RRS1Q15050 365 aaKnown RBP16.78■□□□□ 0.28
LMCD1-206ENST00000456506 AMPHP49418 695 aa16.77■□□□□ 0.28
LMCD1-206ENST00000456506 INSRP06213 1382 aa16.77■□□□□ 0.27
LMCD1-206ENST00000456506 CGNL1Q0VF96 1302 aa16.76■□□□□ 0.27
LMCD1-206ENST00000456506 USHBP1Q8N6Y0 703 aa16.76■□□□□ 0.27
LMCD1-206ENST00000456506 NLGN2Q8NFZ4 835 aa16.76■□□□□ 0.27
LMCD1-206ENST00000456506 SYTL4Q96C24 671 aaPredicted RBP16.76■□□□□ 0.27
LMCD1-206ENST00000456506 TFCP2L1Q9NZI6 479 aa16.76■□□□□ 0.27
LMCD1-206ENST00000456506 KIF24Q5T7B8 1368 aa16.76■□□□□ 0.27
LMCD1-206ENST00000456506 COL23A1Q86Y22 540 aaPredicted RBP16.75■□□□□ 0.27
LMCD1-206ENST00000456506 GGNBP2Q9H3C7 697 aa16.75■□□□□ 0.27
LMCD1-206ENST00000456506 KIAA1551Q9HCM1 1747 aa16.75■□□□□ 0.27
LMCD1-206ENST00000456506 USP47Q96K76 1375 aa16.75■□□□□ 0.27
LMCD1-206ENST00000456506 KIF13BQ9NQT8 1826 aa16.75■□□□□ 0.27
LMCD1-206ENST00000456506 SLC24A1O60721 1099 aa16.74■□□□□ 0.27
LMCD1-206ENST00000456506 CCNL1Q9UK58 526 aaPredicted RBP16.74■□□□□ 0.27
LMCD1-206ENST00000456506 FLT4P35916 1363 aa16.74■□□□□ 0.27
LMCD1-206ENST00000456506 SMG6Q86US8 1419 aaKnown RBP16.73■□□□□ 0.27
LMCD1-206ENST00000456506 ZNF831Q5JPB2 1677 aa16.73■□□□□ 0.27
LMCD1-206ENST00000456506 POLD1P28340 1107 aa16.73■□□□□ 0.27
LMCD1-206ENST00000456506 HSP90AB2PQ58FF8 381 aa16.73■□□□□ 0.27
LMCD1-206ENST00000456506 C1QTNF8P60827 252 aa16.72■□□□□ 0.27
LMCD1-206ENST00000456506 GPR162Q16538 588 aa16.72■□□□□ 0.27
LMCD1-206ENST00000456506 COL5A3P25940 1745 aaPredicted RBP16.72■□□□□ 0.27
LMCD1-206ENST00000456506 YBX3P16989 372 aaKnown RBP eCLIP16.71■□□□□ 0.27
LMCD1-206ENST00000456506 CARD14Q9BXL6 1004 aa16.71■□□□□ 0.27
LMCD1-206ENST00000456506 CYP27B1O15528 508 aa16.7■□□□□ 0.26
LMCD1-206ENST00000456506 TMF1P82094 1093 aa16.7■□□□□ 0.26
LMCD1-206ENST00000456506 PCDH11XQ9BZA7 1347 aa16.7■□□□□ 0.26
LMCD1-206ENST00000456506 PCDH11YQ9BZA8 1340 aa16.7■□□□□ 0.26
LMCD1-206ENST00000456506 PALLDQ8WX93 1383 aa16.69■□□□□ 0.26
LMCD1-206ENST00000456506 AMIGO3Q86WK7 504 aa16.69■□□□□ 0.26
LMCD1-206ENST00000456506 KLHL34Q8N239 644 aa16.69■□□□□ 0.26
LMCD1-206ENST00000456506 RAPGEF4Q8WZA2 1011 aa16.69■□□□□ 0.26
LMCD1-206ENST00000456506 BRCA1P38398 1863 aaKnown RBP16.69■□□□□ 0.26
LMCD1-206ENST00000456506 TATP17735 454 aaPredicted RBP16.68■□□□□ 0.26
LMCD1-206ENST00000456506 VIRMAQ69YN4 1812 aaKnown RBP16.68■□□□□ 0.26
LMCD1-206ENST00000456506 NSD3Q9BZ95 1437 aa16.67■□□□□ 0.26
LMCD1-206ENST00000456506 C4AP0C0L4 1744 aa16.67■□□□□ 0.26
LMCD1-206ENST00000456506 EMILIN1Q9Y6C2 1016 aa16.66■□□□□ 0.26
LMCD1-206ENST00000456506 N4BP2Q86UW6 1770 aaPredicted RBP16.66■□□□□ 0.26
LMCD1-206ENST00000456506 CICQ96RK0 1608 aaPredicted RBP16.66■□□□□ 0.26
LMCD1-206ENST00000456506 NKX1-1Q15270 411 aaPredicted RBP16.65■□□□□ 0.26
LMCD1-206ENST00000456506 MSL1Q68DK7 614 aa16.65■□□□□ 0.26
LMCD1-206ENST00000456506 CEP350Q5VT06 3117 aa16.65■□□□□ 0.26
LMCD1-206ENST00000456506 SENP3-EIF4A1A0A087X0R7 540 aa16.64■□□□□ 0.25
LMCD1-206ENST00000456506 MPRIPQ6WCQ1 1025 aa16.64■□□□□ 0.25
LMCD1-206ENST00000456506 ADCY9O60503 1353 aa16.64■□□□□ 0.25
LMCD1-206ENST00000456506 PELP1Q8IZL8 1130 aaKnown RBP16.63■□□□□ 0.25
LMCD1-206ENST00000456506 CD2APQ9Y5K6 639 aa16.63■□□□□ 0.25
LMCD1-206ENST00000456506 MYH14Q7Z406 1995 aaKnown RBP16.63■□□□□ 0.25
LMCD1-206ENST00000456506 MSH5O43196 834 aa16.62■□□□□ 0.25
LMCD1-206ENST00000456506 PIGBQ92521 554 aa16.62■□□□□ 0.25
LMCD1-206ENST00000456506 WASHC2AQ641Q2 1341 aa16.62■□□□□ 0.25
LMCD1-206ENST00000456506 GRIN3BO60391 1043 aa16.61■□□□□ 0.25
LMCD1-206ENST00000456506 SMIM5Q71RC9 77 aa16.61■□□□□ 0.25
LMCD1-206ENST00000456506 FLAD1Q8NFF5 587 aa16.61■□□□□ 0.25
LMCD1-206ENST00000456506 ATP10DQ9P241 1426 aa16.61■□□□□ 0.25
LMCD1-206ENST00000456506 GIGYF1O75420 1035 aaPredicted RBP16.6■□□□□ 0.25
LMCD1-206ENST00000456506 CDCA8Q53HL2 280 aa16.6■□□□□ 0.25
LMCD1-206ENST00000456506 TJP1Q07157 1748 aa16.59■□□□□ 0.25
LMCD1-206ENST00000456506 SCN11AQ9UI33 1791 aa16.59■□□□□ 0.25
LMCD1-206ENST00000456506 LINC00116Q8NCU8 138 aa16.59■□□□□ 0.25
LMCD1-206ENST00000456506 SMARCC1Q92922 1105 aaPredicted RBP16.59■□□□□ 0.25
LMCD1-206ENST00000456506 EYA1Q99502 592 aa16.59■□□□□ 0.25
LMCD1-206ENST00000456506 KDRP35968 1356 aa16.59■□□□□ 0.25
LMCD1-206ENST00000456506 ARFGEF1Q9Y6D6 1849 aa16.59■□□□□ 0.25
LMCD1-206ENST00000456506 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.58■□□□□ 0.24
LMCD1-206ENST00000456506 PLEKHG2Q9H7P9 1386 aa16.58■□□□□ 0.24
LMCD1-206ENST00000456506 ADAMTS7Q9UKP4 1686 aa16.58■□□□□ 0.24
LMCD1-206ENST00000456506 ITPK1Q13572 414 aa16.57■□□□□ 0.24
LMCD1-206ENST00000456506 POLKQ9UBT6 870 aa16.57■□□□□ 0.24
LMCD1-206ENST00000456506 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.56■□□□□ 0.24
LMCD1-206ENST00000456506 LOC102724428A0A0B4J2F2 783 aa16.56■□□□□ 0.24
LMCD1-206ENST00000456506 PHKG2P15735 406 aa16.56■□□□□ 0.24
LMCD1-206ENST00000456506 HMGB2P26583 209 aaKnown RBP16.56■□□□□ 0.24
LMCD1-206ENST00000456506 SIK1P57059 783 aa16.56■□□□□ 0.24
LMCD1-206ENST00000456506 AK7Q96M32 723 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 443.8 ms