RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 R3HCC1Q9Y3T6 440 aaKnown RBP23.23■■□□□ 1.31
SEMA3B-208ENST00000456210 PRKAR2BP31323 418 aa23.23■■□□□ 1.31
SEMA3B-208ENST00000456210 SRPK2P78362 688 aaKnown RBP23.23■■□□□ 1.31
SEMA3B-208ENST00000456210 NFE2L2Q16236 605 aa23.23■■□□□ 1.31
SEMA3B-208ENST00000456210 GPT2Q8TD30 523 aa23.23■■□□□ 1.31
SEMA3B-208ENST00000456210 ZNF853P0CG23 659 aa23.22■■□□□ 1.31
SEMA3B-208ENST00000456210 NCLP19338 710 aaKnown RBP23.22■■□□□ 1.31
SEMA3B-208ENST00000456210 GNAI1P63096 354 aa23.22■■□□□ 1.31
SEMA3B-208ENST00000456210 PKP1Q13835 747 aa23.22■■□□□ 1.31
SEMA3B-208ENST00000456210 API5Q9BZZ5 524 aaKnown RBP23.22■■□□□ 1.31
SEMA3B-208ENST00000456210 YTHDC2Q9H6S0 1430 aaKnown RBP23.22■■□□□ 1.31
SEMA3B-208ENST00000456210 LRSAM1Q6UWE0 723 aa23.21■■□□□ 1.31
SEMA3B-208ENST00000456210 TSPYL6Q8N831 410 aa23.21■■□□□ 1.31
SEMA3B-208ENST00000456210 STK26Q9P289 416 aa23.21■■□□□ 1.31
SEMA3B-208ENST00000456210 RIMS2Q9UQ26 1411 aa23.21■■□□□ 1.31
SEMA3B-208ENST00000456210 DLG5Q8TDM6 1919 aa23.21■■□□□ 1.31
SEMA3B-208ENST00000456210 ST18O60284 1047 aa23.2■■□□□ 1.3
SEMA3B-208ENST00000456210 MTERF4Q7Z6M4 381 aaKnown RBP23.2■■□□□ 1.3
SEMA3B-208ENST00000456210 ZDHHC9Q9Y397 364 aa23.19■■□□□ 1.3
SEMA3B-208ENST00000456210 ZNF142P52746 1687 aaPredicted RBP23.19■■□□□ 1.3
SEMA3B-208ENST00000456210 RBM10P98175 930 aaKnown RBP23.18■■□□□ 1.3
SEMA3B-208ENST00000456210 CCDC39Q9UFE4 941 aa23.18■■□□□ 1.3
SEMA3B-208ENST00000456210 ATP10DQ9P241 1426 aa23.18■■□□□ 1.3
SEMA3B-208ENST00000456210 UQCRHLA0A096LP55 91 aa23.18■■□□□ 1.3
SEMA3B-208ENST00000456210 DYNC1I1O14576 645 aa23.18■■□□□ 1.3
SEMA3B-208ENST00000456210 PRPF40AO75400 957 aaKnown RBP23.18■■□□□ 1.3
SEMA3B-208ENST00000456210 UQCRHP07919 91 aa23.18■■□□□ 1.3
SEMA3B-208ENST00000456210 XPCQ01831 940 aaPredicted RBP23.18■■□□□ 1.3
SEMA3B-208ENST00000456210 MAP2P11137 1827 aaKnown RBP23.18■■□□□ 1.3
SEMA3B-208ENST00000456210 LTKP29376 864 aa23.17■■□□□ 1.3
SEMA3B-208ENST00000456210 MBIPQ9NS73 344 aa23.17■■□□□ 1.3
SEMA3B-208ENST00000456210 SAFB2Q14151 953 aaKnown RBP eCLIP23.17■■□□□ 1.3
SEMA3B-208ENST00000456210 TWISTNBQ3B726 338 aaPredicted RBP23.16■■□□□ 1.3
SEMA3B-208ENST00000456210 HDGFL2Q7Z4V5 671 aaPredicted RBP23.16■■□□□ 1.3
SEMA3B-208ENST00000456210 THEMISQ8N1K5 641 aaPredicted RBP23.16■■□□□ 1.3
SEMA3B-208ENST00000456210 ZGPATQ8N5A5 531 aaKnown RBP23.16■■□□□ 1.3
SEMA3B-208ENST00000456210 TMEM63CQ9P1W3 806 aa23.16■■□□□ 1.3
SEMA3B-208ENST00000456210 RBM27Q9P2N5 1060 aaKnown RBP23.16■■□□□ 1.3
SEMA3B-208ENST00000456210 LMTK3Q96Q04 1460 aa23.16■■□□□ 1.3
SEMA3B-208ENST00000456210 CASC1Q6TDU7 716 aa23.15■■□□□ 1.3
SEMA3B-208ENST00000456210 FAM13BQ9NYF5 915 aa23.15■■□□□ 1.3
SEMA3B-208ENST00000456210 MBD3O95983 291 aa23.15■■□□□ 1.3
SEMA3B-208ENST00000456210 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.15■■□□□ 1.3
SEMA3B-208ENST00000456210 TMEM2Q9UHN6 1383 aa23.14■■□□□ 1.3
SEMA3B-208ENST00000456210 ANKRD44Q8N8A2 993 aa23.14■■□□□ 1.29
SEMA3B-208ENST00000456210 PHACTR3Q96KR7 559 aa23.14■■□□□ 1.29
SEMA3B-208ENST00000456210 SASS6Q6UVJ0 657 aa23.13■■□□□ 1.29
SEMA3B-208ENST00000456210 PRAM1Q96QH2 718 aa23.13■■□□□ 1.29
SEMA3B-208ENST00000456210 THUMPD2Q9BTF0 503 aaKnown RBP23.13■■□□□ 1.29
SEMA3B-208ENST00000456210 REC8O95072 547 aa23.12■■□□□ 1.29
SEMA3B-208ENST00000456210 SDSP20132 328 aa23.12■■□□□ 1.29
SEMA3B-208ENST00000456210 POLKQ9UBT6 870 aa23.12■■□□□ 1.29
SEMA3B-208ENST00000456210 SETD1AO15047 1707 aaKnown RBP23.12■■□□□ 1.29
SEMA3B-208ENST00000456210 TXNDC2Q86VQ3 553 aa23.12■■□□□ 1.29
SEMA3B-208ENST00000456210 PRDM4Q9UKN5 801 aa23.12■■□□□ 1.29
SEMA3B-208ENST00000456210 CPSF1Q10570 1443 aaKnown RBP23.11■■□□□ 1.29
SEMA3B-208ENST00000456210 SYCE3A1L190 88 aa23.11■■□□□ 1.29
SEMA3B-208ENST00000456210 RPAP2Q8IXW5 612 aaPredicted RBP23.11■■□□□ 1.29
SEMA3B-208ENST00000456210 DLC1Q96QB1 1528 aa23.11■■□□□ 1.29
SEMA3B-208ENST00000456210 ATP7BP35670 1465 aa23.1■■□□□ 1.29
SEMA3B-208ENST00000456210 CDK12Q9NYV4 1490 aaPredicted RBP23.1■■□□□ 1.29
SEMA3B-208ENST00000456210 HDGFP51858 240 aaKnown RBP23.1■■□□□ 1.29
SEMA3B-208ENST00000456210 LMOD3Q0VAK6 560 aa23.1■■□□□ 1.29
SEMA3B-208ENST00000456210 C16orf71Q8IYS4 520 aaPredicted RBP23.1■■□□□ 1.29
SEMA3B-208ENST00000456210 RGS12O14924 1447 aa23.1■■□□□ 1.29
SEMA3B-208ENST00000456210 C8orf58Q8NAV2 365 aa23.09■■□□□ 1.29
SEMA3B-208ENST00000456210 TUBGCP6Q96RT7 1819 aa23.09■■□□□ 1.29
SEMA3B-208ENST00000456210 MINK1Q8N4C8 1332 aaPredicted RBP23.09■■□□□ 1.29
SEMA3B-208ENST00000456210 NCKAP5LQ9HCH0 1330 aa23.09■■□□□ 1.29
SEMA3B-208ENST00000456210 AEBP2Q6ZN18 517 aaPredicted RBP23.09■■□□□ 1.29
SEMA3B-208ENST00000456210 ELL2O00472 640 aaPredicted RBP23.08■■□□□ 1.29
SEMA3B-208ENST00000456210 NSFL1CQ9UNZ2 370 aaKnown RBP23.08■■□□□ 1.29
SEMA3B-208ENST00000456210 OTUD7AQ8TE49 926 aaPredicted RBP23.07■■□□□ 1.28
SEMA3B-208ENST00000456210 NRXN3Q9Y4C0 1643 aa23.07■■□□□ 1.28
SEMA3B-208ENST00000456210 ERC2O15083 957 aa23.07■■□□□ 1.28
SEMA3B-208ENST00000456210 CEP85Q6P2H3 762 aa23.07■■□□□ 1.28
SEMA3B-208ENST00000456210 SMAP1Q8IYB5 467 aaPredicted RBP23.07■■□□□ 1.28
SEMA3B-208ENST00000456210 SLIT1O75093 1534 aa23.07■■□□□ 1.28
SEMA3B-208ENST00000456210 ARHGAP23Q9P227 1491 aa23.06■■□□□ 1.28
SEMA3B-208ENST00000456210 HMOX1P09601 288 aa23.06■■□□□ 1.28
SEMA3B-208ENST00000456210 MCM2P49736 904 aa23.06■■□□□ 1.28
SEMA3B-208ENST00000456210 BRD1O95696 1058 aa23.05■■□□□ 1.28
SEMA3B-208ENST00000456210 IL13P35225 146 aa23.05■■□□□ 1.28
SEMA3B-208ENST00000456210 EID1Q9Y6B2 187 aa23.05■■□□□ 1.28
SEMA3B-208ENST00000456210 RTL1A6NKG5 1358 aa23.04■■□□□ 1.28
SEMA3B-208ENST00000456210 CUL4AQ13619 759 aa23.04■■□□□ 1.28
SEMA3B-208ENST00000456210 ANKLE2Q86XL3 938 aa23.04■■□□□ 1.28
SEMA3B-208ENST00000456210 SLC26A8Q96RN1 970 aa23.03■■□□□ 1.28
SEMA3B-208ENST00000456210 CDK19Q9BWU1 502 aa23.03■■□□□ 1.28
SEMA3B-208ENST00000456210 TSPY26PQ9H489 355 aa23.03■■□□□ 1.28
SEMA3B-208ENST00000456210 OSBPL3Q9H4L5 887 aa23.03■■□□□ 1.28
SEMA3B-208ENST00000456210 CABP1Q9NZU7 370 aa23.03■■□□□ 1.28
SEMA3B-208ENST00000456210 KIAA2012Q0VF49 1180 aa23.02■■□□□ 1.28
SEMA3B-208ENST00000456210 TMX3Q96JJ7 454 aa23.02■■□□□ 1.28
SEMA3B-208ENST00000456210 SYAP1Q96A49 352 aaPredicted RBP23.02■■□□□ 1.28
SEMA3B-208ENST00000456210 MSH6P52701 1360 aa23.01■■□□□ 1.27
SEMA3B-208ENST00000456210 AATKQ6ZMQ8 1374 aa23.01■■□□□ 1.27
SEMA3B-208ENST00000456210 HAP1P54257 671 aaPredicted RBP23.01■■□□□ 1.27
SEMA3B-208ENST00000456210 INTS4Q96HW7 963 aaKnown RBP23.01■■□□□ 1.27
SEMA3B-208ENST00000456210 CHAMP1Q96JM3 812 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms