RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 LRRC4BQ9NT99 713 aa18■□□□□ 0.47
TREX1-203ENST00000456089 RTL1A6NKG5 1358 aa18■□□□□ 0.47
TREX1-203ENST00000456089 NSD3Q9BZ95 1437 aa17.99■□□□□ 0.47
TREX1-203ENST00000456089 LY75O60449 1722 aa17.99■□□□□ 0.47
TREX1-203ENST00000456089 KCNQ4P56696 695 aa17.99■□□□□ 0.47
TREX1-203ENST00000456089 ZNF827Q17R98 1081 aa17.99■□□□□ 0.47
TREX1-203ENST00000456089 PTGER2P43116 358 aa17.98■□□□□ 0.47
TREX1-203ENST00000456089 HSP90AB2PQ58FF8 381 aa17.98■□□□□ 0.47
TREX1-203ENST00000456089 POLR3GLQ9BT43 218 aa17.98■□□□□ 0.47
TREX1-203ENST00000456089 PRIM1P49642 420 aaKnown RBP17.97■□□□□ 0.47
TREX1-203ENST00000456089 CDCA8Q53HL2 280 aa17.97■□□□□ 0.47
TREX1-203ENST00000456089 ZCRB1Q8TBF4 217 aaKnown RBP17.97■□□□□ 0.47
TREX1-203ENST00000456089 EMILIN1Q9Y6C2 1016 aa17.96■□□□□ 0.47
TREX1-203ENST00000456089 QSER1Q2KHR3 1735 aa17.95■□□□□ 0.46
TREX1-203ENST00000456089 ANKRD26Q9UPS8 1709 aa17.95■□□□□ 0.46
TREX1-203ENST00000456089 NSD2O96028 1365 aa17.95■□□□□ 0.46
TREX1-203ENST00000456089 SMG6Q86US8 1419 aaKnown RBP17.95■□□□□ 0.46
TREX1-203ENST00000456089 ITGB4P16144 1822 aa17.94■□□□□ 0.46
TREX1-203ENST00000456089 TOGARAM1Q9Y4F4 1720 aa17.94■□□□□ 0.46
TREX1-203ENST00000456089 INSRP06213 1382 aa17.93■□□□□ 0.46
TREX1-203ENST00000456089 FLT4P35916 1363 aa17.93■□□□□ 0.46
TREX1-203ENST00000456089 PPM1GO15355 546 aaPredicted RBP17.93■□□□□ 0.46
TREX1-203ENST00000456089 RAPGEF4Q8WZA2 1011 aa17.92■□□□□ 0.46
TREX1-203ENST00000456089 MTFR1LQ9H019 292 aa17.92■□□□□ 0.46
TREX1-203ENST00000456089 TATP17735 454 aaPredicted RBP17.91■□□□□ 0.46
TREX1-203ENST00000456089 AKT1S1Q96B36 256 aa17.91■□□□□ 0.46
TREX1-203ENST00000456089 SGIP1Q9BQI5 828 aa17.91■□□□□ 0.46
TREX1-203ENST00000456089 PKD1L3Q7Z443 1732 aa17.91■□□□□ 0.46
TREX1-203ENST00000456089 YY1P25490 414 aa17.9■□□□□ 0.46
TREX1-203ENST00000456089 FHDC1Q9C0D6 1143 aaPredicted RBP17.9■□□□□ 0.46
TREX1-203ENST00000456089 TAF1LQ8IZX4 1826 aa17.9■□□□□ 0.46
TREX1-203ENST00000456089 C5P01031 1676 aa17.9■□□□□ 0.46
TREX1-203ENST00000456089 EIF4G2P78344 907 aaKnown RBP eCLIP17.89■□□□□ 0.45
TREX1-203ENST00000456089 SLC27A3Q5K4L6 730 aa17.88■□□□□ 0.45
TREX1-203ENST00000456089 PNPLA7Q6ZV29 1317 aa17.88■□□□□ 0.45
TREX1-203ENST00000456089 COL24A1Q17RW2 1714 aa17.87■□□□□ 0.45
TREX1-203ENST00000456089 HSPA5P11021 654 aaKnown RBP17.87■□□□□ 0.45
TREX1-203ENST00000456089 TNNT2P45379 298 aaPredicted RBP17.87■□□□□ 0.45
TREX1-203ENST00000456089 SYT17Q9BSW7 474 aa17.87■□□□□ 0.45
TREX1-203ENST00000456089 DCAF8L1A6NGE4 600 aa17.86■□□□□ 0.45
TREX1-203ENST00000456089 TFCP2L1Q9NZI6 479 aa17.86■□□□□ 0.45
TREX1-203ENST00000456089 CCNL1Q9UK58 526 aaPredicted RBP17.86■□□□□ 0.45
TREX1-203ENST00000456089 CGNL1Q0VF96 1302 aa17.86■□□□□ 0.45
TREX1-203ENST00000456089 KIF24Q5T7B8 1368 aa17.86■□□□□ 0.45
TREX1-203ENST00000456089 CYP27B1O15528 508 aa17.85■□□□□ 0.45
TREX1-203ENST00000456089 ARXQ96QS3 562 aa17.85■□□□□ 0.45
TREX1-203ENST00000456089 PCDH11XQ9BZA7 1347 aa17.85■□□□□ 0.45
TREX1-203ENST00000456089 PCDH11YQ9BZA8 1340 aa17.85■□□□□ 0.45
TREX1-203ENST00000456089 KLHL34Q8N239 644 aa17.84■□□□□ 0.45
TREX1-203ENST00000456089 CHD4Q14839 1912 aa17.84■□□□□ 0.45
TREX1-203ENST00000456089 MPRIPQ6WCQ1 1025 aa17.83■□□□□ 0.44
TREX1-203ENST00000456089 POLKQ9UBT6 870 aa17.83■□□□□ 0.44
TREX1-203ENST00000456089 UTRNP46939 3433 aa17.82■□□□□ 0.44
TREX1-203ENST00000456089 NCAPD2Q15021 1401 aa17.82■□□□□ 0.44
TREX1-203ENST00000456089 WASHC2AQ641Q2 1341 aa17.82■□□□□ 0.44
TREX1-203ENST00000456089 EYA1Q99502 592 aa17.82■□□□□ 0.44
TREX1-203ENST00000456089 MSH5O43196 834 aa17.81■□□□□ 0.44
TREX1-203ENST00000456089 PALLDQ8WX93 1383 aa17.8■□□□□ 0.44
TREX1-203ENST00000456089 PANK3Q9H999 370 aa17.8■□□□□ 0.44
TREX1-203ENST00000456089 C4BP0C0L5 1744 aa17.79■□□□□ 0.44
TREX1-203ENST00000456089 EIF4A2Q14240 407 aaKnown RBP17.79■□□□□ 0.44
TREX1-203ENST00000456089 COL23A1Q86Y22 540 aaPredicted RBP17.79■□□□□ 0.44
TREX1-203ENST00000456089 UBR3Q6ZT12 1888 aa17.78■□□□□ 0.44
TREX1-203ENST00000456089 MSL1Q68DK7 614 aa17.78■□□□□ 0.44
TREX1-203ENST00000456089 SLC16A10Q8TF71 515 aa17.78■□□□□ 0.44
TREX1-203ENST00000456089 POLD1P28340 1107 aa17.77■□□□□ 0.44
TREX1-203ENST00000456089 SMIM5Q71RC9 77 aa17.77■□□□□ 0.44
TREX1-203ENST00000456089 PIGBQ92521 554 aa17.77■□□□□ 0.44
TREX1-203ENST00000456089 SPG7Q9UQ90 795 aa17.76■□□□□ 0.43
TREX1-203ENST00000456089 AMIGO3Q86WK7 504 aa17.75■□□□□ 0.43
TREX1-203ENST00000456089 NLGN2Q8NFZ4 835 aa17.75■□□□□ 0.43
TREX1-203ENST00000456089 MAP3K5Q99683 1374 aa17.75■□□□□ 0.43
TREX1-203ENST00000456089 PELP1Q8IZL8 1130 aaKnown RBP17.74■□□□□ 0.43
TREX1-203ENST00000456089 NKX1-1Q15270 411 aaPredicted RBP17.73■□□□□ 0.43
TREX1-203ENST00000456089 GOLGB1Q14789 3259 aaKnown RBP17.72■□□□□ 0.43
TREX1-203ENST00000456089 PHKG2P15735 406 aa17.72■□□□□ 0.43
TREX1-203ENST00000456089 GPR162Q16538 588 aa17.72■□□□□ 0.43
TREX1-203ENST00000456089 ASAP1Q9ULH1 1129 aa17.72■□□□□ 0.43
TREX1-203ENST00000456089 PHF14O94880 888 aa17.71■□□□□ 0.43
TREX1-203ENST00000456089 SMARCC1Q92922 1105 aaPredicted RBP17.71■□□□□ 0.43
TREX1-203ENST00000456089 TMOD3Q9NYL9 352 aa17.71■□□□□ 0.43
TREX1-203ENST00000456089 MORC1Q86VD1 984 aa17.7■□□□□ 0.42
TREX1-203ENST00000456089 IFNL2Q8IZJ0 200 aa17.7■□□□□ 0.42
TREX1-203ENST00000456089 LINC00116Q8NCU8 138 aa17.7■□□□□ 0.42
TREX1-203ENST00000456089 AK7Q96M32 723 aa17.7■□□□□ 0.42
TREX1-203ENST00000456089 VIRMAQ69YN4 1812 aaKnown RBP17.7■□□□□ 0.42
TREX1-203ENST00000456089 IGSF1Q8N6C5 1336 aa17.7■□□□□ 0.42
TREX1-203ENST00000456089 AEBP1Q8IUX7 1158 aa17.69■□□□□ 0.42
TREX1-203ENST00000456089 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.69■□□□□ 0.42
TREX1-203ENST00000456089 LOC102724428A0A0B4J2F2 783 aa17.68■□□□□ 0.42
TREX1-203ENST00000456089 SIK1P57059 783 aa17.68■□□□□ 0.42
TREX1-203ENST00000456089 ITPK1Q13572 414 aa17.68■□□□□ 0.42
TREX1-203ENST00000456089 ZNF784Q8NCA9 323 aaPredicted RBP17.68■□□□□ 0.42
TREX1-203ENST00000456089 ATG3Q9NT62 314 aa17.67■□□□□ 0.42
TREX1-203ENST00000456089 KNSTRNQ9Y448 316 aa17.66■□□□□ 0.42
TREX1-203ENST00000456089 COL5A3P25940 1745 aaPredicted RBP17.66■□□□□ 0.42
TREX1-203ENST00000456089 KIF7Q2M1P5 1343 aa17.66■□□□□ 0.42
TREX1-203ENST00000456089 KDM6AO15550 1401 aaPredicted RBP17.65■□□□□ 0.42
TREX1-203ENST00000456089 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.65■□□□□ 0.42
TREX1-203ENST00000456089 YBX3P16989 372 aaKnown RBP eCLIP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms