RNA–Protein interactions for RNA: ENST00000455939.1

LINC00161-202, long intergenic non-protein coding RNA 161, humanhuman

TSL 2

Gene LINC00161, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00161-202ENST00000455939 RELBQ01201 579 aa9.67□□□□□ -0.86
LINC00161-202ENST00000455939 MRPL14Q6P1L8 145 aaKnown RBP9.67□□□□□ -0.86
LINC00161-202ENST00000455939 CCDC97Q96F63 343 aaPredicted RBP9.67□□□□□ -0.86
LINC00161-202ENST00000455939 PURBQ96QR8 312 aaKnown RBP9.67□□□□□ -0.86
LINC00161-202ENST00000455939 ATP13A2Q9NQ11 1180 aa9.67□□□□□ -0.86
LINC00161-202ENST00000455939 TFIP11Q9UBB9 837 aaKnown RBP9.67□□□□□ -0.86
LINC00161-202ENST00000455939 CHIC2Q9UKJ5 165 aa9.67□□□□□ -0.86
LINC00161-202ENST00000455939 PALM3A6NDB9 673 aaPredicted RBP9.66□□□□□ -0.86
LINC00161-202ENST00000455939 ADH1AP07327 375 aa9.66□□□□□ -0.86
LINC00161-202ENST00000455939 NCOA4Q13772 614 aa9.66□□□□□ -0.86
LINC00161-202ENST00000455939 Q6ZVU0 165 aa9.66□□□□□ -0.86
LINC00161-202ENST00000455939 LINC00528Q8N1L1 170 aa9.66□□□□□ -0.86
LINC00161-202ENST00000455939 SIRT1Q96EB6 747 aa9.66□□□□□ -0.86
LINC00161-202ENST00000455939 PPP1R12CQ9BZL4 782 aa9.66□□□□□ -0.86
LINC00161-202ENST00000455939 USP17L3A6NCW0 530 aa9.65□□□□□ -0.86
LINC00161-202ENST00000455939 USP17L4A6NCW7 530 aa9.65□□□□□ -0.86
LINC00161-202ENST00000455939 ATP5J2-PTCD1G3V325 749 aa9.65□□□□□ -0.86
LINC00161-202ENST00000455939 BMP2P12643 396 aa9.65□□□□□ -0.86
LINC00161-202ENST00000455939 USP17L2Q6R6M4 530 aa9.65□□□□□ -0.86
LINC00161-202ENST00000455939 USP17L1Q7RTZ2 530 aa9.65□□□□□ -0.86
LINC00161-202ENST00000455939 CYP2U1Q7Z449 544 aa9.65□□□□□ -0.86
LINC00161-202ENST00000455939 TRIM46Q7Z4K8 759 aa9.65□□□□□ -0.86
LINC00161-202ENST00000455939 TSEN34Q9BSV6 310 aaKnown RBP9.65□□□□□ -0.86
LINC00161-202ENST00000455939 ZNF395Q9H8N7 513 aaPredicted RBP9.64□□□□□ -0.87
LINC00161-202ENST00000455939 LMOD1P29536 600 aaPredicted RBP9.63□□□□□ -0.87
LINC00161-202ENST00000455939 OSBPL3Q9H4L5 887 aa9.63□□□□□ -0.87
LINC00161-202ENST00000455939 NOD1Q9Y239 953 aa9.63□□□□□ -0.87
LINC00161-202ENST00000455939 MAFBQ9Y5Q3 323 aaPredicted RBP9.63□□□□□ -0.87
LINC00161-202ENST00000455939 LZTS3O60299 673 aaPredicted RBP9.62□□□□□ -0.87
LINC00161-202ENST00000455939 RFX1P22670 979 aa9.62□□□□□ -0.87
LINC00161-202ENST00000455939 ZFP42Q96MM3 310 aa9.62□□□□□ -0.87
LINC00161-202ENST00000455939 GMPR2Q9P2T1 348 aaKnown RBP9.62□□□□□ -0.87
LINC00161-202ENST00000455939 PTGIRP43119 386 aa9.61□□□□□ -0.87
LINC00161-202ENST00000455939 PSME1Q06323 249 aa9.61□□□□□ -0.87
LINC00161-202ENST00000455939 PLEKHM2Q8IWE5 1019 aa9.61□□□□□ -0.87
LINC00161-202ENST00000455939 CCDC82Q8N4S0 544 aa9.61□□□□□ -0.87
LINC00161-202ENST00000455939 RAB6BQ9NRW1 208 aa9.61□□□□□ -0.87
LINC00161-202ENST00000455939 SERPINA10Q9UK55 444 aa9.61□□□□□ -0.87
LINC00161-202ENST00000455939 MEN1O00255 615 aa9.6□□□□□ -0.87
LINC00161-202ENST00000455939 GTF2IP78347 998 aa9.6□□□□□ -0.87
LINC00161-202ENST00000455939 C1orf115Q9H7X2 142 aa9.6□□□□□ -0.87
LINC00161-202ENST00000455939 SENP2Q9HC62 589 aa9.6□□□□□ -0.87
LINC00161-202ENST00000455939 ARHGEF10LQ9HCE6 1279 aa9.6□□□□□ -0.87
LINC00161-202ENST00000455939 POLMQ9NP87 494 aaPredicted RBP9.6□□□□□ -0.87
LINC00161-202ENST00000455939 INSM2Q96T92 566 aaPredicted RBP9.59□□□□□ -0.87
LINC00161-202ENST00000455939 MKRN1Q9UHC7 482 aaKnown RBP9.59□□□□□ -0.87
LINC00161-202ENST00000455939 C11orf95C9JLR9 678 aaPredicted RBP9.58□□□□□ -0.88
LINC00161-202ENST00000455939 SPINT1O43278 529 aa9.58□□□□□ -0.88
LINC00161-202ENST00000455939 GNRH1P01148 92 aa9.58□□□□□ -0.88
LINC00161-202ENST00000455939 CFAP70Q5T0N1 1121 aa9.58□□□□□ -0.88
LINC00161-202ENST00000455939 TRIM50Q86XT4 487 aa9.58□□□□□ -0.88
LINC00161-202ENST00000455939 KDF1Q8NAX2 398 aaPredicted RBP9.58□□□□□ -0.88
LINC00161-202ENST00000455939 ARID3AQ99856 593 aa9.58□□□□□ -0.88
LINC00161-202ENST00000455939 A0A1W2PRU2 124 aa9.57□□□□□ -0.88
LINC00161-202ENST00000455939 STAU1O95793 577 aaKnown RBP9.57□□□□□ -0.88
LINC00161-202ENST00000455939 KIFC2Q96AC6 838 aa9.57□□□□□ -0.88
LINC00161-202ENST00000455939 NLRP3Q96P20 1036 aa9.57□□□□□ -0.88
LINC00161-202ENST00000455939 ATP1A2P50993 1020 aa9.56□□□□□ -0.88
LINC00161-202ENST00000455939 TTLL8A6PVC2 850 aa9.55□□□□□ -0.88
LINC00161-202ENST00000455939 MAN1A2O60476 641 aa9.55□□□□□ -0.88
LINC00161-202ENST00000455939 RASA1P20936 1047 aa9.55□□□□□ -0.88
LINC00161-202ENST00000455939 CTSOP43234 321 aaPredicted RBP9.55□□□□□ -0.88
LINC00161-202ENST00000455939 GDF10P55107 478 aa9.55□□□□□ -0.88
LINC00161-202ENST00000455939 CDCA8Q53HL2 280 aa9.55□□□□□ -0.88
LINC00161-202ENST00000455939 ESCO1Q5FWF5 840 aa9.55□□□□□ -0.88
LINC00161-202ENST00000455939 OGFOD1Q8N543 542 aa9.55□□□□□ -0.88
LINC00161-202ENST00000455939 TRIM47Q96LD4 638 aa9.55□□□□□ -0.88
LINC00161-202ENST00000455939 VRTNQ9H8Y1 702 aa9.55□□□□□ -0.88
LINC00161-202ENST00000455939 PCDHGA11Q9Y5H2 935 aa9.55□□□□□ -0.88
LINC00161-202ENST00000455939 LARP1Q6PKG0 1096 aaKnown RBP9.54□□□□□ -0.88
LINC00161-202ENST00000455939 CNKSR1Q969H4 720 aa9.54□□□□□ -0.88
LINC00161-202ENST00000455939 ZNF594Q96JF6 807 aaPredicted RBP9.54□□□□□ -0.88
LINC00161-202ENST00000455939 ETNK1Q9HBU6 452 aa9.54□□□□□ -0.88
LINC00161-202ENST00000455939 DNAAF2Q9NVR5 837 aaKnown RBP9.54□□□□□ -0.88
LINC00161-202ENST00000455939 FIGNL2A6NMB9 653 aa9.53□□□□□ -0.88
LINC00161-202ENST00000455939 SNRPBP14678 240 aaKnown RBP9.53□□□□□ -0.88
LINC00161-202ENST00000455939 CLDN10P78369 228 aa9.53□□□□□ -0.88
LINC00161-202ENST00000455939 CLN3Q13286 438 aa9.53□□□□□ -0.88
LINC00161-202ENST00000455939 RBM19Q9Y4C8 960 aaKnown RBP9.53□□□□□ -0.88
LINC00161-202ENST00000455939 SOS2Q07890 1332 aaPredicted RBP9.53□□□□□ -0.88
LINC00161-202ENST00000455939 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.52□□□□□ -0.89
LINC00161-202ENST00000455939 SOBPA7XYQ1 873 aa9.52□□□□□ -0.89
LINC00161-202ENST00000455939 IL2RAP01589 272 aa9.52□□□□□ -0.89
LINC00161-202ENST00000455939 SLC27A3Q5K4L6 730 aa9.52□□□□□ -0.89
LINC00161-202ENST00000455939 TPCN2Q8NHX9 752 aa9.52□□□□□ -0.89
LINC00161-202ENST00000455939 SERTAD1Q9UHV2 236 aa9.52□□□□□ -0.89
LINC00161-202ENST00000455939 KIAA1024Q9UPX6 916 aa9.52□□□□□ -0.89
LINC00161-202ENST00000455939 SCNN1DP51172 638 aa9.51□□□□□ -0.89
LINC00161-202ENST00000455939 KANK4Q5T7N3 995 aaPredicted RBP9.51□□□□□ -0.89
LINC00161-202ENST00000455939 LCE2AQ5TA79 106 aaPredicted RBP9.51□□□□□ -0.89
LINC00161-202ENST00000455939 CCDC102BQ68D86 513 aa9.51□□□□□ -0.89
LINC00161-202ENST00000455939 ESYT1Q9BSJ8 1104 aa9.51□□□□□ -0.89
LINC00161-202ENST00000455939 INHAP05111 366 aa9.5□□□□□ -0.89
LINC00161-202ENST00000455939 TLR1Q15399 786 aa9.5□□□□□ -0.89
LINC00161-202ENST00000455939 FOXD4L5Q5VV16 416 aaPredicted RBP9.5□□□□□ -0.89
LINC00161-202ENST00000455939 LARGE2Q8N3Y3 721 aa9.5□□□□□ -0.89
LINC00161-202ENST00000455939 DNMT3LQ9UJW3 386 aa9.5□□□□□ -0.89
LINC00161-202ENST00000455939 TMEM229AB2RXF0 380 aa9.49□□□□□ -0.89
LINC00161-202ENST00000455939 GTF2E1P29083 439 aaPredicted RBP9.49□□□□□ -0.89
LINC00161-202ENST00000455939 CENPCQ03188 943 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms