RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 DOT1LQ8TEK3 1739 aa16.56■□□□□ 0.24
PDGFB-204ENST00000455790 ANKRD26Q9UPS8 1709 aa16.56■□□□□ 0.24
PDGFB-204ENST00000455790 KIF24Q5T7B8 1368 aa16.55■□□□□ 0.24
PDGFB-204ENST00000455790 NSD2O96028 1365 aa16.54■□□□□ 0.24
PDGFB-204ENST00000455790 CGNL1Q0VF96 1302 aa16.54■□□□□ 0.24
PDGFB-204ENST00000455790 ZCRB1Q8TBF4 217 aaKnown RBP16.54■□□□□ 0.24
PDGFB-204ENST00000455790 PPM1GO15355 546 aaPredicted RBP16.52■□□□□ 0.24
PDGFB-204ENST00000455790 SPON1Q9HCB6 807 aa16.52■□□□□ 0.24
PDGFB-204ENST00000455790 LRRC4BQ9NT99 713 aa16.52■□□□□ 0.24
PDGFB-204ENST00000455790 STK32BQ9NY57 414 aa16.52■□□□□ 0.24
PDGFB-204ENST00000455790 ZBTB7AO95365 584 aa16.51■□□□□ 0.23
PDGFB-204ENST00000455790 PRIM1P49642 420 aaKnown RBP16.51■□□□□ 0.23
PDGFB-204ENST00000455790 SLC15A2Q16348 729 aa16.51■□□□□ 0.23
PDGFB-204ENST00000455790 RAPGEF4Q8WZA2 1011 aa16.51■□□□□ 0.23
PDGFB-204ENST00000455790 SYTL4Q96C24 671 aaPredicted RBP16.51■□□□□ 0.23
PDGFB-204ENST00000455790 NCAPD2Q15021 1401 aa16.51■□□□□ 0.23
PDGFB-204ENST00000455790 ZNF827Q17R98 1081 aa16.5■□□□□ 0.23
PDGFB-204ENST00000455790 TATP17735 454 aaPredicted RBP16.49■□□□□ 0.23
PDGFB-204ENST00000455790 TNNT2P45379 298 aaPredicted RBP16.49■□□□□ 0.23
PDGFB-204ENST00000455790 KCNQ4P56696 695 aa16.49■□□□□ 0.23
PDGFB-204ENST00000455790 PANK3Q9H999 370 aa16.49■□□□□ 0.23
PDGFB-204ENST00000455790 POLKQ9UBT6 870 aa16.49■□□□□ 0.23
PDGFB-204ENST00000455790 KAT6BQ8WYB5 2073 aa16.48■□□□□ 0.23
PDGFB-204ENST00000455790 PKD1L3Q7Z443 1732 aa16.48■□□□□ 0.23
PDGFB-204ENST00000455790 WASHC2AQ641Q2 1341 aa16.47■□□□□ 0.23
PDGFB-204ENST00000455790 PPP1R1BQ9UD71 204 aaPredicted RBP16.47■□□□□ 0.23
PDGFB-204ENST00000455790 TOGARAM1Q9Y4F4 1720 aa16.47■□□□□ 0.23
PDGFB-204ENST00000455790 MAP2P11137 1827 aaKnown RBP16.47■□□□□ 0.23
PDGFB-204ENST00000455790 PCDH11XQ9BZA7 1347 aa16.46■□□□□ 0.23
PDGFB-204ENST00000455790 PCDH11YQ9BZA8 1340 aa16.46■□□□□ 0.23
PDGFB-204ENST00000455790 CYP27B1O15528 508 aa16.46■□□□□ 0.23
PDGFB-204ENST00000455790 PTGER2P43116 358 aa16.46■□□□□ 0.23
PDGFB-204ENST00000455790 ATF5Q9Y2D1 282 aaPredicted RBP16.46■□□□□ 0.23
PDGFB-204ENST00000455790 LY75O60449 1722 aa16.45■□□□□ 0.22
PDGFB-204ENST00000455790 EYA1Q99502 592 aa16.45■□□□□ 0.22
PDGFB-204ENST00000455790 AKT1S1Q96B36 256 aa16.44■□□□□ 0.22
PDGFB-204ENST00000455790 EIF4A2Q14240 407 aaKnown RBP16.43■□□□□ 0.22
PDGFB-204ENST00000455790 SLC27A3Q5K4L6 730 aa16.43■□□□□ 0.22
PDGFB-204ENST00000455790 KIF7Q2M1P5 1343 aa16.43■□□□□ 0.22
PDGFB-204ENST00000455790 TUBGCP6Q96RT7 1819 aa16.42■□□□□ 0.22
PDGFB-204ENST00000455790 SGIP1Q9BQI5 828 aa16.42■□□□□ 0.22
PDGFB-204ENST00000455790 MTFR1LQ9H019 292 aa16.42■□□□□ 0.22
PDGFB-204ENST00000455790 PNPLA7Q6ZV29 1317 aa16.41■□□□□ 0.22
PDGFB-204ENST00000455790 QSER1Q2KHR3 1735 aa16.4■□□□□ 0.22
PDGFB-204ENST00000455790 CCNL1Q9UK58 526 aaPredicted RBP16.4■□□□□ 0.22
PDGFB-204ENST00000455790 IGSF1Q8N6C5 1336 aa16.39■□□□□ 0.21
PDGFB-204ENST00000455790 PALLDQ8WX93 1383 aa16.38■□□□□ 0.21
PDGFB-204ENST00000455790 MPRIPQ6WCQ1 1025 aa16.38■□□□□ 0.21
PDGFB-204ENST00000455790 ITGB4P16144 1822 aa16.38■□□□□ 0.21
PDGFB-204ENST00000455790 NKX1-1Q15270 411 aaPredicted RBP16.37■□□□□ 0.21
PDGFB-204ENST00000455790 MORC1Q86VD1 984 aa16.37■□□□□ 0.21
PDGFB-204ENST00000455790 TFCP2L1Q9NZI6 479 aa16.37■□□□□ 0.21
PDGFB-204ENST00000455790 SPG7Q9UQ90 795 aa16.37■□□□□ 0.21
PDGFB-204ENST00000455790 C5P01031 1676 aa16.37■□□□□ 0.21
PDGFB-204ENST00000455790 AMER1Q5JTC6 1135 aaPredicted RBP16.36■□□□□ 0.21
PDGFB-204ENST00000455790 FHDC1Q9C0D6 1143 aaPredicted RBP16.36■□□□□ 0.21
PDGFB-204ENST00000455790 KNSTRNQ9Y448 316 aa16.36■□□□□ 0.21
PDGFB-204ENST00000455790 PHKG2P15735 406 aa16.35■□□□□ 0.21
PDGFB-204ENST00000455790 PIGBQ92521 554 aa16.35■□□□□ 0.21
PDGFB-204ENST00000455790 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.35■□□□□ 0.21
PDGFB-204ENST00000455790 AEBP1Q8IUX7 1158 aa16.34■□□□□ 0.21
PDGFB-204ENST00000455790 UTRNP46939 3433 aa16.33■□□□□ 0.21
PDGFB-204ENST00000455790 COL24A1Q17RW2 1714 aa16.33■□□□□ 0.21
PDGFB-204ENST00000455790 ARXQ96QS3 562 aa16.33■□□□□ 0.2
PDGFB-204ENST00000455790 SYT17Q9BSW7 474 aa16.33■□□□□ 0.2
PDGFB-204ENST00000455790 TAF1LQ8IZX4 1826 aa16.33■□□□□ 0.2
PDGFB-204ENST00000455790 IFNL2Q8IZJ0 200 aa16.32■□□□□ 0.2
PDGFB-204ENST00000455790 C4BP0C0L5 1744 aa16.31■□□□□ 0.2
PDGFB-204ENST00000455790 PLEKHG2Q9H7P9 1386 aa16.31■□□□□ 0.2
PDGFB-204ENST00000455790 AMIGO3Q86WK7 504 aa16.31■□□□□ 0.2
PDGFB-204ENST00000455790 COL23A1Q86Y22 540 aaPredicted RBP16.31■□□□□ 0.2
PDGFB-204ENST00000455790 SLC16A10Q8TF71 515 aa16.31■□□□□ 0.2
PDGFB-204ENST00000455790 KDM6AO15550 1401 aaPredicted RBP16.3■□□□□ 0.2
PDGFB-204ENST00000455790 PER1O15534 1290 aaPredicted RBP16.3■□□□□ 0.2
PDGFB-204ENST00000455790 SMARCC1Q92922 1105 aaPredicted RBP16.3■□□□□ 0.2
PDGFB-204ENST00000455790 TMOD3Q9NYL9 352 aa16.3■□□□□ 0.2
PDGFB-204ENST00000455790 ASAP1Q9ULH1 1129 aa16.3■□□□□ 0.2
PDGFB-204ENST00000455790 MAP3K5Q99683 1374 aa16.29■□□□□ 0.2
PDGFB-204ENST00000455790 IL13P35225 146 aa16.29■□□□□ 0.2
PDGFB-204ENST00000455790 SMIM5Q71RC9 77 aa16.29■□□□□ 0.2
PDGFB-204ENST00000455790 GOLGB1Q14789 3259 aaKnown RBP16.29■□□□□ 0.2
PDGFB-204ENST00000455790 LOC102724428A0A0B4J2F2 783 aa16.28■□□□□ 0.2
PDGFB-204ENST00000455790 MSH5O43196 834 aa16.28■□□□□ 0.2
PDGFB-204ENST00000455790 SIK1P57059 783 aa16.28■□□□□ 0.2
PDGFB-204ENST00000455790 CC2D1BQ5T0F9 858 aaKnown RBP16.28■□□□□ 0.2
PDGFB-204ENST00000455790 MSL1Q68DK7 614 aa16.28■□□□□ 0.2
PDGFB-204ENST00000455790 ZNF530Q6P9A1 599 aaPredicted RBP16.28■□□□□ 0.2
PDGFB-204ENST00000455790 LINC00116Q8NCU8 138 aa16.28■□□□□ 0.2
PDGFB-204ENST00000455790 KDRP35968 1356 aa16.27■□□□□ 0.2
PDGFB-204ENST00000455790 YY1P25490 414 aa16.27■□□□□ 0.2
PDGFB-204ENST00000455790 POLD1P28340 1107 aa16.27■□□□□ 0.2
PDGFB-204ENST00000455790 ITPK1Q13572 414 aa16.27■□□□□ 0.2
PDGFB-204ENST00000455790 SULT6B1Q6IMI4 303 aa16.27■□□□□ 0.2
PDGFB-204ENST00000455790 KLHL34Q8N239 644 aa16.27■□□□□ 0.2
PDGFB-204ENST00000455790 MTHFSP49914 203 aa16.26■□□□□ 0.19
PDGFB-204ENST00000455790 PLEKHO1Q53GL0 409 aaPredicted RBP16.26■□□□□ 0.19
PDGFB-204ENST00000455790 ATG3Q9NT62 314 aa16.26■□□□□ 0.19
PDGFB-204ENST00000455790 UBR3Q6ZT12 1888 aa16.25■□□□□ 0.19
PDGFB-204ENST00000455790 CNGB1Q14028 1251 aaPredicted RBP16.25■□□□□ 0.19
PDGFB-204ENST00000455790 DCAF5Q96JK2 942 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms