RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 AMPHP49418 695 aa26.34■■□□□ 1.81
MSH6-206ENST00000455383 ZCRB1Q8TBF4 217 aaKnown RBP26.34■■□□□ 1.81
MSH6-206ENST00000455383 MEGF6O75095 1541 aa26.34■■□□□ 1.81
MSH6-206ENST00000455383 LY75O60449 1722 aa26.34■■□□□ 1.81
MSH6-206ENST00000455383 DOT1LQ8TEK3 1739 aa26.34■■□□□ 1.81
MSH6-206ENST00000455383 RTL1A6NKG5 1358 aa26.33■■□□□ 1.8
MSH6-206ENST00000455383 RGPD2P0DJD1 1756 aa26.32■■□□□ 1.8
MSH6-206ENST00000455383 TUBGCP6Q96RT7 1819 aa26.31■■□□□ 1.8
MSH6-206ENST00000455383 KCNQ4P56696 695 aa26.3■■□□□ 1.8
MSH6-206ENST00000455383 SYTL4Q96C24 671 aaPredicted RBP26.3■■□□□ 1.8
MSH6-206ENST00000455383 TFCP2L1Q9NZI6 479 aa26.29■■□□□ 1.8
MSH6-206ENST00000455383 FYB1O15117 783 aa26.28■■□□□ 1.8
MSH6-206ENST00000455383 POLD1P28340 1107 aa26.28■■□□□ 1.8
MSH6-206ENST00000455383 NBPF6Q5VWK0 638 aa26.28■■□□□ 1.8
MSH6-206ENST00000455383 NBPF4Q96M43 638 aa26.28■■□□□ 1.8
MSH6-206ENST00000455383 CGNL1Q0VF96 1302 aa26.27■■□□□ 1.8
MSH6-206ENST00000455383 RRS1Q15050 365 aaKnown RBP26.26■■□□□ 1.79
MSH6-206ENST00000455383 GPR162Q16538 588 aa26.24■■□□□ 1.79
MSH6-206ENST00000455383 CCNL1Q9UK58 526 aaPredicted RBP26.24■■□□□ 1.79
MSH6-206ENST00000455383 GGNBP2Q9H3C7 697 aa26.23■■□□□ 1.79
MSH6-206ENST00000455383 INSRP06213 1382 aa26.2■■□□□ 1.79
MSH6-206ENST00000455383 USP47Q96K76 1375 aa26.2■■□□□ 1.79
MSH6-206ENST00000455383 TMF1P82094 1093 aa26.2■■□□□ 1.78
MSH6-206ENST00000455383 COL23A1Q86Y22 540 aaPredicted RBP26.2■■□□□ 1.78
MSH6-206ENST00000455383 USHBP1Q8N6Y0 703 aa26.2■■□□□ 1.78
MSH6-206ENST00000455383 NLGN2Q8NFZ4 835 aa26.2■■□□□ 1.78
MSH6-206ENST00000455383 SMG6Q86US8 1419 aaKnown RBP26.2■■□□□ 1.78
MSH6-206ENST00000455383 KLHL34Q8N239 644 aa26.19■■□□□ 1.78
MSH6-206ENST00000455383 RAPGEF4Q8WZA2 1011 aa26.19■■□□□ 1.78
MSH6-206ENST00000455383 KIF24Q5T7B8 1368 aa26.19■■□□□ 1.78
MSH6-206ENST00000455383 C1QTNF8P60827 252 aa26.18■■□□□ 1.78
MSH6-206ENST00000455383 HSP90AB2PQ58FF8 381 aa26.18■■□□□ 1.78
MSH6-206ENST00000455383 TATP17735 454 aaPredicted RBP26.17■■□□□ 1.78
MSH6-206ENST00000455383 FLT4P35916 1363 aa26.16■■□□□ 1.78
MSH6-206ENST00000455383 GOLGB1Q14789 3259 aaKnown RBP26.15■■□□□ 1.78
MSH6-206ENST00000455383 PCDH11XQ9BZA7 1347 aa26.14■■□□□ 1.78
MSH6-206ENST00000455383 PCDH11YQ9BZA8 1340 aa26.14■■□□□ 1.78
MSH6-206ENST00000455383 KIF20BQ96Q89 1820 aa26.13■■□□□ 1.77
MSH6-206ENST00000455383 C5P01031 1676 aa26.12■■□□□ 1.77
MSH6-206ENST00000455383 HMGB2P26583 209 aaKnown RBP26.12■■□□□ 1.77
MSH6-206ENST00000455383 CYP27B1O15528 508 aa26.11■■□□□ 1.77
MSH6-206ENST00000455383 CDCA8Q53HL2 280 aa26.11■■□□□ 1.77
MSH6-206ENST00000455383 PELP1Q8IZL8 1130 aaKnown RBP26.11■■□□□ 1.77
MSH6-206ENST00000455383 NCAPD2Q15021 1401 aa26.11■■□□□ 1.77
MSH6-206ENST00000455383 PALLDQ8WX93 1383 aa26.1■■□□□ 1.77
MSH6-206ENST00000455383 MSH5O43196 834 aa26.1■■□□□ 1.77
MSH6-206ENST00000455383 YBX3P16989 372 aaKnown RBP eCLIP26.1■■□□□ 1.77
MSH6-206ENST00000455383 CARD14Q9BXL6 1004 aa26.1■■□□□ 1.77
MSH6-206ENST00000455383 SENP3-EIF4A1A0A087X0R7 540 aa26.09■■□□□ 1.77
MSH6-206ENST00000455383 GRIN3BO60391 1043 aa26.09■■□□□ 1.77
MSH6-206ENST00000455383 TAF1LQ8IZX4 1826 aa26.09■■□□□ 1.77
MSH6-206ENST00000455383 TOGARAM1Q9Y4F4 1720 aa26.08■■□□□ 1.77
MSH6-206ENST00000455383 FLAD1Q8NFF5 587 aa26.08■■□□□ 1.77
MSH6-206ENST00000455383 PKD1L3Q7Z443 1732 aa26.08■■□□□ 1.76
MSH6-206ENST00000455383 MSL1Q68DK7 614 aa26.07■■□□□ 1.76
MSH6-206ENST00000455383 MPRIPQ6WCQ1 1025 aa26.07■■□□□ 1.76
MSH6-206ENST00000455383 NKX1-1Q15270 411 aaPredicted RBP26.06■■□□□ 1.76
MSH6-206ENST00000455383 CD2APQ9Y5K6 639 aa26.06■■□□□ 1.76
MSH6-206ENST00000455383 EMILIN1Q9Y6C2 1016 aa26.06■■□□□ 1.76
MSH6-206ENST00000455383 ITGB4P16144 1822 aa26.04■■□□□ 1.76
MSH6-206ENST00000455383 GIGYF1O75420 1035 aaPredicted RBP26.04■■□□□ 1.76
MSH6-206ENST00000455383 SMARCC1Q92922 1105 aaPredicted RBP26.04■■□□□ 1.76
MSH6-206ENST00000455383 C4BP0C0L5 1744 aa26.03■■□□□ 1.76
MSH6-206ENST00000455383 NSD3Q9BZ95 1437 aa26.03■■□□□ 1.76
MSH6-206ENST00000455383 ANKRD26Q9UPS8 1709 aa26.02■■□□□ 1.76
MSH6-206ENST00000455383 AMIGO3Q86WK7 504 aa26.02■■□□□ 1.76
MSH6-206ENST00000455383 PIGBQ92521 554 aa26.02■■□□□ 1.76
MSH6-206ENST00000455383 WASHC2AQ641Q2 1341 aa26■■□□□ 1.75
MSH6-206ENST00000455383 MAP2P11137 1827 aaKnown RBP25.99■■□□□ 1.75
MSH6-206ENST00000455383 UBR3Q6ZT12 1888 aa25.98■■□□□ 1.75
MSH6-206ENST00000455383 AK7Q96M32 723 aa25.98■■□□□ 1.75
MSH6-206ENST00000455383 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.98■■□□□ 1.753e-7■■■■□ 24.2
MSH6-206ENST00000455383 SPG7Q9UQ90 795 aa25.98■■□□□ 1.75
MSH6-206ENST00000455383 EYA1Q99502 592 aa25.97■■□□□ 1.75
MSH6-206ENST00000455383 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.95■■□□□ 1.74
MSH6-206ENST00000455383 LOC102724428A0A0B4J2F2 783 aa25.94■■□□□ 1.74
MSH6-206ENST00000455383 PPM1GO15355 546 aaPredicted RBP25.94■■□□□ 1.74
MSH6-206ENST00000455383 SSFA2P28290 1259 aa25.94■■□□□ 1.74
MSH6-206ENST00000455383 SIK1P57059 783 aa25.94■■□□□ 1.74
MSH6-206ENST00000455383 ATP10DQ9P241 1426 aa25.94■■□□□ 1.74
MSH6-206ENST00000455383 SMIM5Q71RC9 77 aa25.93■■□□□ 1.74
MSH6-206ENST00000455383 LINC00116Q8NCU8 138 aa25.93■■□□□ 1.74
MSH6-206ENST00000455383 POLKQ9UBT6 870 aa25.93■■□□□ 1.74
MSH6-206ENST00000455383 ADCY9O60503 1353 aa25.92■■□□□ 1.74
MSH6-206ENST00000455383 PHF14O94880 888 aa25.91■■□□□ 1.74
MSH6-206ENST00000455383 PHKG2P15735 406 aa25.91■■□□□ 1.74
MSH6-206ENST00000455383 IFNL2Q8IZJ0 200 aa25.9■■□□□ 1.74
MSH6-206ENST00000455383 TMOD3Q9NYL9 352 aa25.9■■□□□ 1.74
MSH6-206ENST00000455383 ASAP1Q9ULH1 1129 aa25.9■■□□□ 1.74
MSH6-206ENST00000455383 TIMELESSQ9UNS1 1208 aa25.9■■□□□ 1.74
MSH6-206ENST00000455383 PLEKHG2Q9H7P9 1386 aa25.9■■□□□ 1.74
MSH6-206ENST00000455383 ITPK1Q13572 414 aa25.89■■□□□ 1.74
MSH6-206ENST00000455383 IGSF1Q8N6C5 1336 aa25.88■■□□□ 1.73
MSH6-206ENST00000455383 TRIM26Q12899 539 aaPredicted RBP25.88■■□□□ 1.73
MSH6-206ENST00000455383 ATG3Q9NT62 314 aa25.87■■□□□ 1.73
MSH6-206ENST00000455383 EIF4A2Q14240 407 aaKnown RBP25.85■■□□□ 1.73
MSH6-206ENST00000455383 KDRP35968 1356 aa25.84■■□□□ 1.73
MSH6-206ENST00000455383 ATP6V1AP38606 617 aa25.84■■□□□ 1.73
MSH6-206ENST00000455383 GNPATO15228 680 aa25.83■■□□□ 1.73
MSH6-206ENST00000455383 GPBP1L1Q9HC44 474 aaPredicted RBP25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms