RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 CDAN1Q8IWY9 1227 aa7.27□□□□□ -1.25
HMGB1P4-201ENST00000455362 CFAP65Q6ZU64 1925 aaKnown RBP7.27□□□□□ -1.25
HMGB1P4-201ENST00000455362 PRDM15P57071 1507 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P4-201ENST00000455362 REREQ9P2R6 1566 aa7.26□□□□□ -1.25
HMGB1P4-201ENST00000455362 PLA2R1Q13018 1463 aa7.26□□□□□ -1.25
HMGB1P4-201ENST00000455362 DDX11L8A8MPP1 907 aa7.26□□□□□ -1.25
HMGB1P4-201ENST00000455362 AGLP35573 1532 aa7.26□□□□□ -1.25
HMGB1P4-201ENST00000455362 WASHC2CQ9Y4E1 1318 aa7.26□□□□□ -1.25
HMGB1P4-201ENST00000455362 TET3O43151 1660 aa7.25□□□□□ -1.25
HMGB1P4-201ENST00000455362 RPRD2Q5VT52 1461 aaKnown RBP7.25□□□□□ -1.25
HMGB1P4-201ENST00000455362 DNAJB2P25686 324 aa7.25□□□□□ -1.25
HMGB1P4-201ENST00000455362 VAC14Q08AM6 782 aa7.25□□□□□ -1.25
HMGB1P4-201ENST00000455362 CCDC125Q86Z20 511 aa7.25□□□□□ -1.25
HMGB1P4-201ENST00000455362 CHMP4AQ9BY43 222 aa7.25□□□□□ -1.25
HMGB1P4-201ENST00000455362 TFIP11Q9UBB9 837 aaKnown RBP7.25□□□□□ -1.25
HMGB1P4-201ENST00000455362 LMTK2Q8IWU2 1503 aa7.25□□□□□ -1.25
HMGB1P4-201ENST00000455362 ARHGEF40Q8TER5 1519 aa7.25□□□□□ -1.25
HMGB1P4-201ENST00000455362 E9PCH4 1651 aa7.25□□□□□ -1.25
HMGB1P4-201ENST00000455362 CEP152O94986 1710 aa7.24□□□□□ -1.25
HMGB1P4-201ENST00000455362 TONSLQ96HA7 1378 aa7.24□□□□□ -1.25
HMGB1P4-201ENST00000455362 NBPF26B4DH59 902 aa7.24□□□□□ -1.25
HMGB1P4-201ENST00000455362 CANXP27824 592 aaKnown RBP7.24□□□□□ -1.25
HMGB1P4-201ENST00000455362 L3MBTL2Q969R5 705 aa7.24□□□□□ -1.25
HMGB1P4-201ENST00000455362 ADAM33Q9BZ11 813 aa7.24□□□□□ -1.25
HMGB1P4-201ENST00000455362 KIAA1522Q9P206 1035 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P4-201ENST00000455362 PTPRTO14522 1441 aa7.24□□□□□ -1.25
HMGB1P4-201ENST00000455362 SIGLEC1Q9BZZ2 1709 aa7.24□□□□□ -1.25
HMGB1P4-201ENST00000455362 ABCC3O15438 1527 aa7.23□□□□□ -1.25
HMGB1P4-201ENST00000455362 PSDA5PKW4 1024 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P4-201ENST00000455362 MOXD2PA6NHM9 499 aa7.23□□□□□ -1.25
HMGB1P4-201ENST00000455362 PPM1GO15355 546 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P4-201ENST00000455362 LILRB3O75022 631 aa7.23□□□□□ -1.25
HMGB1P4-201ENST00000455362 QPCTQ16769 361 aa7.23□□□□□ -1.25
HMGB1P4-201ENST00000455362 PRPF38BQ5VTL8 546 aaKnown RBP7.23□□□□□ -1.25
HMGB1P4-201ENST00000455362 EFCAB6Q5THR3 1501 aa7.22□□□□□ -1.25
HMGB1P4-201ENST00000455362 RTL5Q5HYW3 569 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P4-201ENST00000455362 RDH13Q8NBN7 331 aa7.22□□□□□ -1.25
HMGB1P4-201ENST00000455362 GJD4Q96KN9 370 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P4-201ENST00000455362 EYA1Q99502 592 aa7.22□□□□□ -1.25
HMGB1P4-201ENST00000455362 ALG2Q9H553 416 aa7.22□□□□□ -1.25
HMGB1P4-201ENST00000455362 ZBTB3Q9H5J0 574 aa7.22□□□□□ -1.25
HMGB1P4-201ENST00000455362 BCL2L12Q9HB09 334 aa7.22□□□□□ -1.25
HMGB1P4-201ENST00000455362 SPHKAPQ2M3C7 1700 aa7.21□□□□□ -1.25
HMGB1P4-201ENST00000455362 CCDC144AA2RUR9 1427 aa7.21□□□□□ -1.25
HMGB1P4-201ENST00000455362 ARHGAP31Q2M1Z3 1444 aa7.21□□□□□ -1.25
HMGB1P4-201ENST00000455362 TCF3P15923 654 aa7.21□□□□□ -1.26
HMGB1P4-201ENST00000455362 USP46P62068 366 aa7.21□□□□□ -1.26
HMGB1P4-201ENST00000455362 MLECQ14165 292 aa7.21□□□□□ -1.26
HMGB1P4-201ENST00000455362 PPP4R3BQ5MIZ7 849 aa7.21□□□□□ -1.26
HMGB1P4-201ENST00000455362 PACS2Q86VP3 889 aa7.21□□□□□ -1.26
HMGB1P4-201ENST00000455362 TXNDC2Q86VQ3 553 aa7.21□□□□□ -1.26
HMGB1P4-201ENST00000455362 SIRT1Q96EB6 747 aa7.21□□□□□ -1.26
HMGB1P4-201ENST00000455362 DRC1Q96MC2 740 aa7.21□□□□□ -1.26
HMGB1P4-201ENST00000455362 BCL2L13Q9BXK5 485 aa7.21□□□□□ -1.26
HMGB1P4-201ENST00000455362 AXIN2Q9Y2T1 843 aa7.21□□□□□ -1.26
HMGB1P4-201ENST00000455362 ARID4BQ4LE39 1312 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P4-201ENST00000455362 CAMSAP1Q5T5Y3 1602 aa7.2□□□□□ -1.26
HMGB1P4-201ENST00000455362 NPATQ14207 1427 aa7.2□□□□□ -1.26
HMGB1P4-201ENST00000455362 ZC3H13Q5T200 1668 aaKnown RBP7.2□□□□□ -1.26
HMGB1P4-201ENST00000455362 KDM4AO75164 1064 aa7.2□□□□□ -1.26
HMGB1P4-201ENST00000455362 NDUFV2P19404 249 aa7.2□□□□□ -1.26
HMGB1P4-201ENST00000455362 SOX11P35716 441 aa7.2□□□□□ -1.26
HMGB1P4-201ENST00000455362 PSEN2P49810 448 aa7.2□□□□□ -1.26
HMGB1P4-201ENST00000455362 NUDT18Q6ZVK8 323 aa7.2□□□□□ -1.26
HMGB1P4-201ENST00000455362 PNMA3Q9UL41 463 aa7.2□□□□□ -1.26
HMGB1P4-201ENST00000455362 MAFBQ9Y5Q3 323 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P4-201ENST00000455362 TRPM2O94759 1503 aa7.2□□□□□ -1.26
HMGB1P4-201ENST00000455362 PPP1R3GB7ZBB8 358 aa7.19□□□□□ -1.26
HMGB1P4-201ENST00000455362 ZNF16P17020 682 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P4-201ENST00000455362 PTPREP23469 700 aa7.19□□□□□ -1.26
HMGB1P4-201ENST00000455362 SEMA3FQ13275 785 aa7.19□□□□□ -1.26
HMGB1P4-201ENST00000455362 DMRTA1Q5VZB9 504 aa7.19□□□□□ -1.26
HMGB1P4-201ENST00000455362 DNAJC14Q6Y2X3 702 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P4-201ENST00000455362 UCN2Q96RP3 112 aa7.19□□□□□ -1.26
HMGB1P4-201ENST00000455362 TMEM134Q9H6X4 195 aa7.19□□□□□ -1.26
HMGB1P4-201ENST00000455362 CLTCQ00610 1675 aaKnown RBP7.19□□□□□ -1.26
HMGB1P4-201ENST00000455362 NOS1P29475 1434 aa7.18□□□□□ -1.26
HMGB1P4-201ENST00000455362 ARHGAP33O14559 1287 aa7.18□□□□□ -1.26
HMGB1P4-201ENST00000455362 COL9A1P20849 921 aa7.18□□□□□ -1.26
HMGB1P4-201ENST00000455362 NBPF8Q3BBV2 869 aa7.18□□□□□ -1.26
HMGB1P4-201ENST00000455362 RGL3Q3MIN7 710 aa7.18□□□□□ -1.26
HMGB1P4-201ENST00000455362 HELBQ8NG08 1087 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P4-201ENST00000455362 CABLES1Q8TDN4 633 aa7.18□□□□□ -1.26
HMGB1P4-201ENST00000455362 DCAF11Q8TEB1 546 aa7.18□□□□□ -1.26
HMGB1P4-201ENST00000455362 GIPC2Q8TF65 315 aa7.18□□□□□ -1.26
HMGB1P4-201ENST00000455362 SREK1Q8WXA9 508 aaKnown RBP7.18□□□□□ -1.26
HMGB1P4-201ENST00000455362 TATDN2Q93075 761 aa7.18□□□□□ -1.26
HMGB1P4-201ENST00000455362 ESF1Q9H501 851 aaKnown RBP7.18□□□□□ -1.26
HMGB1P4-201ENST00000455362 PCDHB15Q9Y5E8 787 aa7.18□□□□□ -1.26
HMGB1P4-201ENST00000455362 CLTCL1P53675 1640 aa7.18□□□□□ -1.26
HMGB1P4-201ENST00000455362 SPATA31E1Q6ZUB1 1445 aa7.18□□□□□ -1.26
HMGB1P4-201ENST00000455362 CNTLNQ9NXG0 1405 aa7.18□□□□□ -1.26
HMGB1P4-201ENST00000455362 FDX1P10109 184 aa7.17□□□□□ -1.26
HMGB1P4-201ENST00000455362 ARID4AP29374 1257 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P4-201ENST00000455362 PBX2P40425 430 aa7.17□□□□□ -1.26
HMGB1P4-201ENST00000455362 FAM198AQ9UFP1 575 aa7.17□□□□□ -1.26
HMGB1P4-201ENST00000455362 KIF1BO60333 1816 aa7.17□□□□□ -1.26
HMGB1P4-201ENST00000455362 ZMYM3Q14202 1370 aa7.17□□□□□ -1.26
HMGB1P4-201ENST00000455362 PREX1Q8TCU6 1659 aa7.16□□□□□ -1.26
HMGB1P4-201ENST00000455362 SLC4A3P48751 1232 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms