RNA–Protein interactions for RNA: ENST00000455240.1

PTPA-225, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-225ENST00000455240 ZCRB1Q8TBF4 217 aaKnown RBP22.62■■□□□ 1.21
PTPA-225ENST00000455240 SMG6Q86US8 1419 aaKnown RBP22.62■■□□□ 1.21
PTPA-225ENST00000455240 LY75O60449 1722 aa22.62■■□□□ 1.21
PTPA-225ENST00000455240 CDCA8Q53HL2 280 aa22.61■■□□□ 1.21
PTPA-225ENST00000455240 AKT1S1Q96B36 256 aa22.61■■□□□ 1.21
PTPA-225ENST00000455240 SYTL4Q96C24 671 aaPredicted RBP22.61■■□□□ 1.21
PTPA-225ENST00000455240 SYT17Q9BSW7 474 aa22.61■■□□□ 1.21
PTPA-225ENST00000455240 NSD2O96028 1365 aa22.61■■□□□ 1.21
PTPA-225ENST00000455240 TUBGCP6Q96RT7 1819 aa22.6■■□□□ 1.21
PTPA-225ENST00000455240 PRIM1P49642 420 aaKnown RBP22.6■■□□□ 1.21
PTPA-225ENST00000455240 NBPF6Q5VWK0 638 aa22.59■■□□□ 1.21
PTPA-225ENST00000455240 NBPF4Q96M43 638 aa22.59■■□□□ 1.21
PTPA-225ENST00000455240 ARXQ96QS3 562 aa22.59■■□□□ 1.21
PTPA-225ENST00000455240 MAP3K5Q99683 1374 aa22.59■■□□□ 1.21
PTPA-225ENST00000455240 CGNL1Q0VF96 1302 aa22.58■■□□□ 1.21
PTPA-225ENST00000455240 USHBP1Q8N6Y0 703 aa22.57■■□□□ 1.2
PTPA-225ENST00000455240 INSRP06213 1382 aa22.57■■□□□ 1.2
PTPA-225ENST00000455240 FLT4P35916 1363 aa22.57■■□□□ 1.2
PTPA-225ENST00000455240 KIF24Q5T7B8 1368 aa22.56■■□□□ 1.2
PTPA-225ENST00000455240 RAPGEF4Q8WZA2 1011 aa22.56■■□□□ 1.2
PTPA-225ENST00000455240 COL24A1Q17RW2 1714 aa22.56■■□□□ 1.2
PTPA-225ENST00000455240 PNPLA7Q6ZV29 1317 aa22.56■■□□□ 1.2
PTPA-225ENST00000455240 SLC16A10Q8TF71 515 aa22.55■■□□□ 1.2
PTPA-225ENST00000455240 KCNQ4P56696 695 aa22.54■■□□□ 1.2
PTPA-225ENST00000455240 HSP90AB2PQ58FF8 381 aa22.53■■□□□ 1.2
PTPA-225ENST00000455240 TFCP2L1Q9NZI6 479 aa22.53■■□□□ 1.2
PTPA-225ENST00000455240 NSD3Q9BZ95 1437 aa22.53■■□□□ 1.2
PTPA-225ENST00000455240 CHD4Q14839 1912 aa22.53■■□□□ 1.2
PTPA-225ENST00000455240 TATP17735 454 aaPredicted RBP22.52■■□□□ 1.2
PTPA-225ENST00000455240 CCNL1Q9UK58 526 aaPredicted RBP22.52■■□□□ 1.2
PTPA-225ENST00000455240 PCDH11XQ9BZA7 1347 aa22.51■■□□□ 1.19
PTPA-225ENST00000455240 PCDH11YQ9BZA8 1340 aa22.51■■□□□ 1.19
PTPA-225ENST00000455240 POLD1P28340 1107 aa22.5■■□□□ 1.19
PTPA-225ENST00000455240 CARD14Q9BXL6 1004 aa22.5■■□□□ 1.19
PTPA-225ENST00000455240 ANKRD26Q9UPS8 1709 aa22.5■■□□□ 1.19
PTPA-225ENST00000455240 UTRNP46939 3433 aa22.49■■□□□ 1.19
PTPA-225ENST00000455240 PKD1L3Q7Z443 1732 aa22.48■■□□□ 1.19
PTPA-225ENST00000455240 TIMELESSQ9UNS1 1208 aa22.48■■□□□ 1.19
PTPA-225ENST00000455240 C5P01031 1676 aa22.48■■□□□ 1.19
PTPA-225ENST00000455240 EMILIN1Q9Y6C2 1016 aa22.47■■□□□ 1.19
PTPA-225ENST00000455240 TOGARAM1Q9Y4F4 1720 aa22.46■■□□□ 1.19
PTPA-225ENST00000455240 NCAPD2Q15021 1401 aa22.46■■□□□ 1.19
PTPA-225ENST00000455240 KLHL34Q8N239 644 aa22.45■■□□□ 1.18
PTPA-225ENST00000455240 ZNF784Q8NCA9 323 aaPredicted RBP22.45■■□□□ 1.18
PTPA-225ENST00000455240 CYP27B1O15528 508 aa22.44■■□□□ 1.18
PTPA-225ENST00000455240 ITGB4P16144 1822 aa22.44■■□□□ 1.18
PTPA-225ENST00000455240 TAF1LQ8IZX4 1826 aa22.44■■□□□ 1.18
PTPA-225ENST00000455240 PALLDQ8WX93 1383 aa22.43■■□□□ 1.18
PTPA-225ENST00000455240 CLSPNQ9HAW4 1339 aa22.43■■□□□ 1.18
PTPA-225ENST00000455240 MAP2P11137 1827 aaKnown RBP22.42■■□□□ 1.18
PTPA-225ENST00000455240 PPM1GO15355 546 aaPredicted RBP22.41■■□□□ 1.18
PTPA-225ENST00000455240 MSH5O43196 834 aa22.41■■□□□ 1.18
PTPA-225ENST00000455240 GPR162Q16538 588 aa22.41■■□□□ 1.18
PTPA-225ENST00000455240 COL23A1Q86Y22 540 aaPredicted RBP22.41■■□□□ 1.18
PTPA-225ENST00000455240 HMGB2P26583 209 aaKnown RBP22.4■■□□□ 1.18
PTPA-225ENST00000455240 MPRIPQ6WCQ1 1025 aa22.4■■□□□ 1.18
PTPA-225ENST00000455240 WASHC2AQ641Q2 1341 aa22.39■■□□□ 1.18
PTPA-225ENST00000455240 C4BP0C0L5 1744 aa22.37■■□□□ 1.17
PTPA-225ENST00000455240 NLGN2Q8NFZ4 835 aa22.37■■□□□ 1.17
PTPA-225ENST00000455240 SMARCC1Q92922 1105 aaPredicted RBP22.37■■□□□ 1.17
PTPA-225ENST00000455240 SPG7Q9UQ90 795 aa22.37■■□□□ 1.17
PTPA-225ENST00000455240 NKX1-1Q15270 411 aaPredicted RBP22.36■■□□□ 1.17
PTPA-225ENST00000455240 MSL1Q68DK7 614 aa22.35■■□□□ 1.17
PTPA-225ENST00000455240 PELP1Q8IZL8 1130 aaKnown RBP22.35■■□□□ 1.17
PTPA-225ENST00000455240 FLAD1Q8NFF5 587 aa22.35■■□□□ 1.17
PTPA-225ENST00000455240 EYA1Q99502 592 aa22.35■■□□□ 1.17
PTPA-225ENST00000455240 POLKQ9UBT6 870 aa22.35■■□□□ 1.17
PTPA-225ENST00000455240 PIGBQ92521 554 aa22.34■■□□□ 1.17
PTPA-225ENST00000455240 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.34■■□□□ 1.17
PTPA-225ENST00000455240 UBR3Q6ZT12 1888 aa22.33■■□□□ 1.17
PTPA-225ENST00000455240 GOLGB1Q14789 3259 aaKnown RBP22.33■■□□□ 1.17
PTPA-225ENST00000455240 POLR3GLQ9BT43 218 aa22.33■■□□□ 1.17
PTPA-225ENST00000455240 PCGF6Q9BYE7 350 aa22.33■■□□□ 1.17
PTPA-225ENST00000455240 AK7Q96M32 723 aa22.32■■□□□ 1.16
PTPA-225ENST00000455240 PLEKHG2Q9H7P9 1386 aa22.3■■□□□ 1.16
PTPA-225ENST00000455240 EIF4A2Q14240 407 aaKnown RBP22.29■■□□□ 1.16
PTPA-225ENST00000455240 TMOD3Q9NYL9 352 aa22.29■■□□□ 1.16
PTPA-225ENST00000455240 LOC102724428A0A0B4J2F2 783 aa22.28■■□□□ 1.16
PTPA-225ENST00000455240 PHKG2P15735 406 aa22.28■■□□□ 1.16
PTPA-225ENST00000455240 YBX3P16989 372 aaKnown RBP eCLIP22.28■■□□□ 1.16
PTPA-225ENST00000455240 TNNT2P45379 298 aaPredicted RBP22.28■■□□□ 1.16
PTPA-225ENST00000455240 SIK1P57059 783 aa22.28■■□□□ 1.16
PTPA-225ENST00000455240 IFNL2Q8IZJ0 200 aa22.28■■□□□ 1.16
PTPA-225ENST00000455240 EIF4G2P78344 907 aaKnown RBP eCLIP22.27■■□□□ 1.16
PTPA-225ENST00000455240 AMIGO3Q86WK7 504 aa22.27■■□□□ 1.16
PTPA-225ENST00000455240 CD2APQ9Y5K6 639 aa22.27■■□□□ 1.16
PTPA-225ENST00000455240 GRIN3BO60391 1043 aa22.26■■□□□ 1.15
PTPA-225ENST00000455240 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.25■■□□□ 1.15
PTPA-225ENST00000455240 PHF14O94880 888 aa22.25■■□□□ 1.15
PTPA-225ENST00000455240 HSPA5P11021 654 aaKnown RBP22.25■■□□□ 1.15
PTPA-225ENST00000455240 LINC00116Q8NCU8 138 aa22.25■■□□□ 1.15
PTPA-225ENST00000455240 IGSF1Q8N6C5 1336 aa22.25■■□□□ 1.15
PTPA-225ENST00000455240 SSFA2P28290 1259 aa22.24■■□□□ 1.15
PTPA-225ENST00000455240 ASAP1Q9ULH1 1129 aa22.24■■□□□ 1.15
PTPA-225ENST00000455240 PANK3Q9H999 370 aa22.23■■□□□ 1.15
PTPA-225ENST00000455240 C1QTNF8P60827 252 aa22.22■■□□□ 1.15
PTPA-225ENST00000455240 ITPK1Q13572 414 aa22.22■■□□□ 1.15
PTPA-225ENST00000455240 SMIM5Q71RC9 77 aa22.22■■□□□ 1.15
PTPA-225ENST00000455240 GNPATO15228 680 aa22.2■■□□□ 1.14
PTPA-225ENST00000455240 ATP6V1AP38606 617 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms