RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 CC2D1BQ5T0F9 858 aaKnown RBP24.08■■□□□ 1.45
COPS7A-202ENST00000455113 ACSBG1Q96GR2 724 aa24.08■■□□□ 1.45
COPS7A-202ENST00000455113 EIF4A2Q14240 407 aaKnown RBP24.06■■□□□ 1.44
COPS7A-202ENST00000455113 EYA1Q99502 592 aa24.06■■□□□ 1.44
COPS7A-202ENST00000455113 NBPF14Q5TI25 921 aa24.05■■□□□ 1.44
COPS7A-202ENST00000455113 CNGB1Q14028 1251 aaPredicted RBP24.04■■□□□ 1.44
COPS7A-202ENST00000455113 PCDH11XQ9BZA7 1347 aa24.04■■□□□ 1.44
COPS7A-202ENST00000455113 PCDH11YQ9BZA8 1340 aa24.04■■□□□ 1.44
COPS7A-202ENST00000455113 DDX10Q13206 875 aaKnown RBP24.04■■□□□ 1.44
COPS7A-202ENST00000455113 NHSQ6T4R5 1651 aa24.03■■□□□ 1.44
COPS7A-202ENST00000455113 KCNQ2O43526 872 aa24.03■■□□□ 1.44
COPS7A-202ENST00000455113 RGPD3A6NKT7 1758 aaPredicted RBP24.02■■□□□ 1.44
COPS7A-202ENST00000455113 RGPD4Q7Z3J3 1758 aa24.02■■□□□ 1.44
COPS7A-202ENST00000455113 NPC1L1Q9UHC9 1359 aa24.02■■□□□ 1.44
COPS7A-202ENST00000455113 PTF1AQ7RTS3 328 aa24.02■■□□□ 1.44
COPS7A-202ENST00000455113 SYTL4Q96C24 671 aaPredicted RBP24.02■■□□□ 1.44
COPS7A-202ENST00000455113 SPG7Q9UQ90 795 aa24.01■■□□□ 1.43
COPS7A-202ENST00000455113 RREB1Q92766 1687 aa24.01■■□□□ 1.43
COPS7A-202ENST00000455113 NCAPD2Q15021 1401 aa23.99■■□□□ 1.43
COPS7A-202ENST00000455113 PSDA5PKW4 1024 aaPredicted RBP23.99■■□□□ 1.43
COPS7A-202ENST00000455113 SHANK3Q9BYB0 1731 aa23.99■■□□□ 1.43
COPS7A-202ENST00000455113 MTHFSP49914 203 aa23.98■■□□□ 1.43
COPS7A-202ENST00000455113 R3HDM1Q15032 1099 aaKnown RBP23.98■■□□□ 1.43
COPS7A-202ENST00000455113 IGSF1Q8N6C5 1336 aa23.97■■□□□ 1.43
COPS7A-202ENST00000455113 NUP188Q5SRE5 1749 aa23.97■■□□□ 1.43
COPS7A-202ENST00000455113 PRIM1P49642 420 aaKnown RBP23.96■■□□□ 1.43
COPS7A-202ENST00000455113 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.96■■□□□ 1.43
COPS7A-202ENST00000455113 BTAF1O14981 1849 aa23.95■■□□□ 1.42
COPS7A-202ENST00000455113 TXNRD1Q16881 649 aa23.95■■□□□ 1.42
COPS7A-202ENST00000455113 DOT1LQ8TEK3 1739 aa23.94■■□□□ 1.42
COPS7A-202ENST00000455113 PKD1L3Q7Z443 1732 aa23.94■■□□□ 1.42
COPS7A-202ENST00000455113 PLEKHG2Q9H7P9 1386 aa23.93■■□□□ 1.42
COPS7A-202ENST00000455113 CYP27B1O15528 508 aa23.92■■□□□ 1.42
COPS7A-202ENST00000455113 DIEXFQ68CQ4 756 aaKnown RBP23.92■■□□□ 1.42
COPS7A-202ENST00000455113 IL13P35225 146 aa23.91■■□□□ 1.42
COPS7A-202ENST00000455113 IFNL2Q8IZJ0 200 aa23.91■■□□□ 1.42
COPS7A-202ENST00000455113 PLEKHO1Q53GL0 409 aaPredicted RBP23.9■■□□□ 1.42
COPS7A-202ENST00000455113 SULT6B1Q6IMI4 303 aa23.9■■□□□ 1.42
COPS7A-202ENST00000455113 PROM2Q8N271 834 aa23.9■■□□□ 1.42
COPS7A-202ENST00000455113 DIAPH1O60610 1272 aaKnown RBP23.9■■□□□ 1.42
COPS7A-202ENST00000455113 AMOTQ4VCS5 1084 aa23.89■■□□□ 1.41
COPS7A-202ENST00000455113 STK32BQ9NY57 414 aa23.88■■□□□ 1.41
COPS7A-202ENST00000455113 CFAP53Q96M91 514 aa23.87■■□□□ 1.41
COPS7A-202ENST00000455113 NKX1-1Q15270 411 aaPredicted RBP23.87■■□□□ 1.41
COPS7A-202ENST00000455113 SLC27A3Q5K4L6 730 aa23.87■■□□□ 1.41
COPS7A-202ENST00000455113 MPRIPQ6WCQ1 1025 aa23.87■■□□□ 1.41
COPS7A-202ENST00000455113 PHKG2P15735 406 aa23.86■■□□□ 1.41
COPS7A-202ENST00000455113 HSP90AB1P08238 724 aaKnown RBP23.85■■□□□ 1.41
COPS7A-202ENST00000455113 AEBP1Q8IUX7 1158 aa23.85■■□□□ 1.41
COPS7A-202ENST00000455113 C1orf141Q5JVX7 400 aa23.84■■□□□ 1.41
COPS7A-202ENST00000455113 KDRP35968 1356 aa23.83■■□□□ 1.41
COPS7A-202ENST00000455113 HMGB2P26583 209 aaKnown RBP23.83■■□□□ 1.41
COPS7A-202ENST00000455113 ZNF530Q6P9A1 599 aaPredicted RBP23.83■■□□□ 1.41
COPS7A-202ENST00000455113 ANO8Q9HCE9 1232 aaPredicted RBP23.82■■□□□ 1.4
COPS7A-202ENST00000455113 U2SURPO15042 1029 aaKnown RBP23.81■■□□□ 1.4
COPS7A-202ENST00000455113 SLC15A2Q16348 729 aa23.81■■□□□ 1.4
COPS7A-202ENST00000455113 TMOD3Q9NYL9 352 aa23.81■■□□□ 1.4
COPS7A-202ENST00000455113 HMOX1P09601 288 aa23.81■■□□□ 1.4
COPS7A-202ENST00000455113 SMARCC1Q92922 1105 aaPredicted RBP23.81■■□□□ 1.4
COPS7A-202ENST00000455113 ITGB4P16144 1822 aa23.81■■□□□ 1.4
COPS7A-202ENST00000455113 CCNL1Q9UK58 526 aaPredicted RBP23.8■■□□□ 1.4
COPS7A-202ENST00000455113 DCAF5Q96JK2 942 aa23.79■■□□□ 1.4
COPS7A-202ENST00000455113 NUDCQ9Y266 331 aa23.79■■□□□ 1.4
COPS7A-202ENST00000455113 PPP2R1AP30153 589 aa23.79■■□□□ 1.4
COPS7A-202ENST00000455113 LRRC4BQ9NT99 713 aa23.79■■□□□ 1.4
COPS7A-202ENST00000455113 LY75O60449 1722 aa23.78■■□□□ 1.4
COPS7A-202ENST00000455113 TOGARAM1Q9Y4F4 1720 aa23.78■■□□□ 1.4
COPS7A-202ENST00000455113 LRP5O75197 1615 aa23.77■■□□□ 1.4
COPS7A-202ENST00000455113 PIGBQ92521 554 aa23.77■■□□□ 1.4
COPS7A-202ENST00000455113 PALLDQ8WX93 1383 aa23.77■■□□□ 1.4
COPS7A-202ENST00000455113 ERVV-2B6SEH9 535 aa23.76■■□□□ 1.39
COPS7A-202ENST00000455113 COL3A1P02461 1466 aaPredicted RBP23.74■■□□□ 1.39
COPS7A-202ENST00000455113 SPON1Q9HCB6 807 aa23.74■■□□□ 1.39
COPS7A-202ENST00000455113 KCNQ4P56696 695 aa23.73■■□□□ 1.39
COPS7A-202ENST00000455113 CABP4P57796 275 aa23.73■■□□□ 1.39
COPS7A-202ENST00000455113 AKAP4Q5JQC9 854 aa23.73■■□□□ 1.39
COPS7A-202ENST00000455113 SRCAPQ6ZRS2 3230 aa23.73■■□□□ 1.39
COPS7A-202ENST00000455113 TFCP2L1Q9NZI6 479 aa23.73■■□□□ 1.39
COPS7A-202ENST00000455113 PAPPAQ13219 1627 aa23.73■■□□□ 1.39
COPS7A-202ENST00000455113 ZNF827Q17R98 1081 aa23.7■■□□□ 1.39
COPS7A-202ENST00000455113 AKT1S1Q96B36 256 aa23.7■■□□□ 1.38
COPS7A-202ENST00000455113 U2AF1L5P0DN76 240 aaPredicted RBP23.69■■□□□ 1.38
COPS7A-202ENST00000455113 U2AF1Q01081 240 aaKnown RBP eCLIP23.69■■□□□ 1.38
COPS7A-202ENST00000455113 RALBP1Q15311 655 aa23.69■■□□□ 1.38
COPS7A-202ENST00000455113 PPP1R1BQ9UD71 204 aaPredicted RBP23.69■■□□□ 1.38
COPS7A-202ENST00000455113 ANP32CO43423 234 aa23.68■■□□□ 1.38
COPS7A-202ENST00000455113 ASAP1Q9ULH1 1129 aa23.68■■□□□ 1.38
COPS7A-202ENST00000455113 KDM6AO15550 1401 aaPredicted RBP23.68■■□□□ 1.38
COPS7A-202ENST00000455113 MTHFSDQ2M296 383 aaKnown RBP23.67■■□□□ 1.38
COPS7A-202ENST00000455113 CASZ1Q86V15 1759 aa23.67■■□□□ 1.38
COPS7A-202ENST00000455113 LOC102724428A0A0B4J2F2 783 aa23.67■■□□□ 1.38
COPS7A-202ENST00000455113 ZBTB7AO95365 584 aa23.67■■□□□ 1.38
COPS7A-202ENST00000455113 SIK1P57059 783 aa23.67■■□□□ 1.38
COPS7A-202ENST00000455113 GAS2L2Q8NHY3 880 aa23.67■■□□□ 1.38
COPS7A-202ENST00000455113 PDGFDQ9GZP0 370 aaPredicted RBP23.66■■□□□ 1.38
COPS7A-202ENST00000455113 C5P01031 1676 aa23.65■■□□□ 1.38
COPS7A-202ENST00000455113 NFATC2IPQ8NCF5 419 aa23.65■■□□□ 1.38
COPS7A-202ENST00000455113 MTFR1LQ9H019 292 aa23.65■■□□□ 1.38
COPS7A-202ENST00000455113 ATG3Q9NT62 314 aa23.65■■□□□ 1.38
COPS7A-202ENST00000455113 NEFMP07197 916 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms