RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 ACSBG1Q96GR2 724 aa11.3□□□□□ -0.6
NIF3L1-209ENST00000454952 PDGFDQ9GZP0 370 aaPredicted RBP11.3□□□□□ -0.6
NIF3L1-209ENST00000454952 PAPPAQ13219 1627 aa11.3□□□□□ -0.6
NIF3L1-209ENST00000454952 MAP3K5Q99683 1374 aa11.29□□□□□ -0.6
NIF3L1-209ENST00000454952 QSER1Q2KHR3 1735 aa11.29□□□□□ -0.6
NIF3L1-209ENST00000454952 COG3Q96JB2 828 aa11.29□□□□□ -0.6
NIF3L1-209ENST00000454952 SLC16A10Q8TF71 515 aa11.28□□□□□ -0.6
NIF3L1-209ENST00000454952 ARXQ96QS3 562 aa11.28□□□□□ -0.6
NIF3L1-209ENST00000454952 SYT17Q9BSW7 474 aa11.28□□□□□ -0.6
NIF3L1-209ENST00000454952 FHDC1Q9C0D6 1143 aaPredicted RBP11.28□□□□□ -0.6
NIF3L1-209ENST00000454952 AMPHP49418 695 aa11.27□□□□□ -0.61
NIF3L1-209ENST00000454952 SGIP1Q9BQI5 828 aa11.27□□□□□ -0.61
NIF3L1-209ENST00000454952 RTL1A6NKG5 1358 aa11.27□□□□□ -0.61
NIF3L1-209ENST00000454952 POLD1P28340 1107 aa11.26□□□□□ -0.61
NIF3L1-209ENST00000454952 DDX54Q8TDD1 881 aaKnown RBP11.26□□□□□ -0.61
NIF3L1-209ENST00000454952 CGNL1Q0VF96 1302 aa11.26□□□□□ -0.61
NIF3L1-209ENST00000454952 ANKRD36BQ8N2N9 1353 aa11.26□□□□□ -0.61
NIF3L1-209ENST00000454952 LTV1Q96GA3 475 aaPredicted RBP11.25□□□□□ -0.61
NIF3L1-209ENST00000454952 MAP3K19Q56UN5 1328 aa11.25□□□□□ -0.61
NIF3L1-209ENST00000454952 SMG6Q86US8 1419 aaKnown RBP11.25□□□□□ -0.61
NIF3L1-209ENST00000454952 DOT1LQ8TEK3 1739 aa11.24□□□□□ -0.61
NIF3L1-209ENST00000454952 ST20-MTHFSA0A0A6YYL1 179 aa11.24□□□□□ -0.61
NIF3L1-209ENST00000454952 HOXC9P31274 260 aa11.24□□□□□ -0.61
NIF3L1-209ENST00000454952 CDCA8Q53HL2 280 aa11.24□□□□□ -0.61
NIF3L1-209ENST00000454952 ZCRB1Q8TBF4 217 aaKnown RBP11.24□□□□□ -0.61
NIF3L1-209ENST00000454952 AKT1S1Q96B36 256 aa11.24□□□□□ -0.61
NIF3L1-209ENST00000454952 TESK2Q96S53 571 aa11.24□□□□□ -0.61
NIF3L1-209ENST00000454952 TFCP2L1Q9NZI6 479 aa11.24□□□□□ -0.61
NIF3L1-209ENST00000454952 LY75O60449 1722 aa11.23□□□□□ -0.61
NIF3L1-209ENST00000454952 COL24A1Q17RW2 1714 aa11.23□□□□□ -0.61
NIF3L1-209ENST00000454952 TMF1P82094 1093 aa11.23□□□□□ -0.61
NIF3L1-209ENST00000454952 ZNF827Q17R98 1081 aa11.23□□□□□ -0.61
NIF3L1-209ENST00000454952 ZNF784Q8NCA9 323 aaPredicted RBP11.23□□□□□ -0.61
NIF3L1-209ENST00000454952 SYTL4Q96C24 671 aaPredicted RBP11.23□□□□□ -0.61
NIF3L1-209ENST00000454952 LRRC4BQ9NT99 713 aa11.23□□□□□ -0.61
NIF3L1-209ENST00000454952 RGPD2P0DJD1 1756 aa11.22□□□□□ -0.61
NIF3L1-209ENST00000454952 PRIM1P49642 420 aaKnown RBP11.22□□□□□ -0.61
NIF3L1-209ENST00000454952 KIF24Q5T7B8 1368 aa11.22□□□□□ -0.61
NIF3L1-209ENST00000454952 RAPGEF4Q8WZA2 1011 aa11.22□□□□□ -0.61
NIF3L1-209ENST00000454952 SHANK3Q9BYB0 1731 aa11.21□□□□□ -0.61
NIF3L1-209ENST00000454952 USP47Q96K76 1375 aa11.21□□□□□ -0.61
NIF3L1-209ENST00000454952 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
NIF3L1-209ENST00000454952 GPR162Q16538 588 aa11.21□□□□□ -0.61
NIF3L1-209ENST00000454952 TUBGCP6Q96RT7 1819 aa11.21□□□□□ -0.62
NIF3L1-209ENST00000454952 PNPLA7Q6ZV29 1317 aa11.2□□□□□ -0.62
NIF3L1-209ENST00000454952 CCNL1Q9UK58 526 aaPredicted RBP11.2□□□□□ -0.62
NIF3L1-209ENST00000454952 KIF20BQ96Q89 1820 aa11.2□□□□□ -0.62
NIF3L1-209ENST00000454952 MEGF6O75095 1541 aa11.19□□□□□ -0.62
NIF3L1-209ENST00000454952 PCDH11XQ9BZA7 1347 aa11.19□□□□□ -0.62
NIF3L1-209ENST00000454952 PCDH11YQ9BZA8 1340 aa11.19□□□□□ -0.62
NIF3L1-209ENST00000454952 ABCB7O75027 752 aa11.19□□□□□ -0.62
NIF3L1-209ENST00000454952 TATP17735 454 aaPredicted RBP11.19□□□□□ -0.62
NIF3L1-209ENST00000454952 NSD2O96028 1365 aa11.18□□□□□ -0.62
NIF3L1-209ENST00000454952 INSRP06213 1382 aa11.18□□□□□ -0.62
NIF3L1-209ENST00000454952 FLT4P35916 1363 aa11.18□□□□□ -0.62
NIF3L1-209ENST00000454952 FYB1O15117 783 aa11.18□□□□□ -0.62
NIF3L1-209ENST00000454952 KLHL34Q8N239 644 aa11.18□□□□□ -0.62
NIF3L1-209ENST00000454952 FLAD1Q8NFF5 587 aa11.18□□□□□ -0.62
NIF3L1-209ENST00000454952 GRIN3BO60391 1043 aa11.17□□□□□ -0.62
NIF3L1-209ENST00000454952 RRS1Q15050 365 aaKnown RBP11.17□□□□□ -0.62
NIF3L1-209ENST00000454952 NBPF6Q5VWK0 638 aa11.17□□□□□ -0.62
NIF3L1-209ENST00000454952 NBPF4Q96M43 638 aa11.17□□□□□ -0.62
NIF3L1-209ENST00000454952 GGNBP2Q9H3C7 697 aa11.17□□□□□ -0.62
NIF3L1-209ENST00000454952 C5P01031 1676 aa11.17□□□□□ -0.62
NIF3L1-209ENST00000454952 POLA2Q14181 598 aa11.16□□□□□ -0.62
NIF3L1-209ENST00000454952 SMARCC1Q92922 1105 aaPredicted RBP11.16□□□□□ -0.62
NIF3L1-209ENST00000454952 NSD3Q9BZ95 1437 aa11.16□□□□□ -0.62
NIF3L1-209ENST00000454952 TAF1LQ8IZX4 1826 aa11.15□□□□□ -0.62
NIF3L1-209ENST00000454952 C1QTNF8P60827 252 aa11.15□□□□□ -0.62
NIF3L1-209ENST00000454952 PELP1Q8IZL8 1130 aaKnown RBP11.15□□□□□ -0.62
NIF3L1-209ENST00000454952 FBLN1P23142 703 aa11.14□□□□□ -0.63
NIF3L1-209ENST00000454952 KCNQ4P56696 695 aa11.14□□□□□ -0.63
NIF3L1-209ENST00000454952 USHBP1Q8N6Y0 703 aa11.14□□□□□ -0.63
NIF3L1-209ENST00000454952 PALLDQ8WX93 1383 aa11.14□□□□□ -0.63
NIF3L1-209ENST00000454952 ITGB4P16144 1822 aa11.14□□□□□ -0.63
NIF3L1-209ENST00000454952 PKD1L3Q7Z443 1732 aa11.13□□□□□ -0.63
NIF3L1-209ENST00000454952 GIGYF1O75420 1035 aaPredicted RBP11.13□□□□□ -0.63
NIF3L1-209ENST00000454952 HSP90AB2PQ58FF8 381 aa11.13□□□□□ -0.63
NIF3L1-209ENST00000454952 COL23A1Q86Y22 540 aaPredicted RBP11.13□□□□□ -0.63
NIF3L1-209ENST00000454952 CD2APQ9Y5K6 639 aa11.13□□□□□ -0.63
NIF3L1-209ENST00000454952 SENP3-EIF4A1A0A087X0R7 540 aa11.12□□□□□ -0.63
NIF3L1-209ENST00000454952 MPRIPQ6WCQ1 1025 aa11.12□□□□□ -0.63
NIF3L1-209ENST00000454952 AK7Q96M32 723 aa11.12□□□□□ -0.63
NIF3L1-209ENST00000454952 TIMELESSQ9UNS1 1208 aa11.12□□□□□ -0.63
NIF3L1-209ENST00000454952 SPG7Q9UQ90 795 aa11.12□□□□□ -0.63
NIF3L1-209ENST00000454952 ANKRD26Q9UPS8 1709 aa11.12□□□□□ -0.63
NIF3L1-209ENST00000454952 NLGN2Q8NFZ4 835 aa11.11□□□□□ -0.63
NIF3L1-209ENST00000454952 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.11□□□□□ -0.63
NIF3L1-209ENST00000454952 C4BP0C0L5 1744 aa11.11□□□□□ -0.63
NIF3L1-209ENST00000454952 PLEKHG2Q9H7P9 1386 aa11.11□□□□□ -0.63
NIF3L1-209ENST00000454952 NCAPD2Q15021 1401 aa11.1□□□□□ -0.63
NIF3L1-209ENST00000454952 MAP2P11137 1827 aaKnown RBP11.1□□□□□ -0.63
NIF3L1-209ENST00000454952 CYP27B1O15528 508 aa11.1□□□□□ -0.63
NIF3L1-209ENST00000454952 NKX1-1Q15270 411 aaPredicted RBP11.1□□□□□ -0.63
NIF3L1-209ENST00000454952 UTRNP46939 3433 aa11.1□□□□□ -0.63
NIF3L1-209ENST00000454952 WASHC2AQ641Q2 1341 aa11.09□□□□□ -0.63
NIF3L1-209ENST00000454952 TOGARAM1Q9Y4F4 1720 aa11.09□□□□□ -0.63
NIF3L1-209ENST00000454952 UBR3Q6ZT12 1888 aa11.09□□□□□ -0.63
NIF3L1-209ENST00000454952 PPM1GO15355 546 aaPredicted RBP11.09□□□□□ -0.63
NIF3L1-209ENST00000454952 TRIM26Q12899 539 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms