RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 GNAT3A8MTJ3 354 aa8.79□□□□□ -1
ECHDC1-210ENST00000454859 FBLN1P23142 703 aa8.79□□□□□ -1
ECHDC1-210ENST00000454859 PLEKHO1Q53GL0 409 aaPredicted RBP8.79□□□□□ -1
ECHDC1-210ENST00000454859 VIRMAQ69YN4 1812 aaKnown RBP8.78□□□□□ -1
ECHDC1-210ENST00000454859 CCDC136Q96JN2 1154 aa8.78□□□□□ -1
ECHDC1-210ENST00000454859 RGPD2P0DJD1 1756 aa8.78□□□□□ -1
ECHDC1-210ENST00000454859 ZKSCAN2Q63HK3 967 aa8.77□□□□□ -1
ECHDC1-210ENST00000454859 CEMIPQ8WUJ3 1361 aa8.77□□□□□ -1.01
ECHDC1-210ENST00000454859 ERBB3P21860 1342 aa8.77□□□□□ -1.01
ECHDC1-210ENST00000454859 HOXB7P09629 217 aa8.77□□□□□ -1.01
ECHDC1-210ENST00000454859 KDM3BQ7LBC6 1761 aa8.77□□□□□ -1.01
ECHDC1-210ENST00000454859 SIPA1L3O60292 1781 aaPredicted RBP8.76□□□□□ -1.01
ECHDC1-210ENST00000454859 COL14A1Q05707 1796 aaKnown RBP8.76□□□□□ -1.01
ECHDC1-210ENST00000454859 EXOSC9Q06265 439 aaKnown RBP8.76□□□□□ -1.01
ECHDC1-210ENST00000454859 AKAP4Q5JQC9 854 aa8.76□□□□□ -1.01
ECHDC1-210ENST00000454859 RBM33Q96EV2 1170 aaKnown RBP8.76□□□□□ -1.01
ECHDC1-210ENST00000454859 AEBP1Q8IUX7 1158 aa8.76□□□□□ -1.01
ECHDC1-210ENST00000454859 ANKRD24Q8TF21 1146 aa8.76□□□□□ -1.01
ECHDC1-210ENST00000454859 N4BP2Q86UW6 1770 aaPredicted RBP8.76□□□□□ -1.01
ECHDC1-210ENST00000454859 SCN11AQ9UI33 1791 aa8.76□□□□□ -1.01
ECHDC1-210ENST00000454859 ROBO1Q9Y6N7 1651 aa8.75□□□□□ -1.01
ECHDC1-210ENST00000454859 MTHFSDQ2M296 383 aaKnown RBP8.75□□□□□ -1.01
ECHDC1-210ENST00000454859 CENPQQ7L2Z9 268 aaPredicted RBP8.75□□□□□ -1.01
ECHDC1-210ENST00000454859 VAMP4O75379 141 aa8.75□□□□□ -1.01
ECHDC1-210ENST00000454859 HSP90AB1P08238 724 aaKnown RBP8.75□□□□□ -1.01
ECHDC1-210ENST00000454859 CANXP27824 592 aaKnown RBP8.75□□□□□ -1.01
ECHDC1-210ENST00000454859 NUTM2GQ5VZR2 741 aa8.75□□□□□ -1.01
ECHDC1-210ENST00000454859 CNKSR2Q8WXI2 1034 aa8.75□□□□□ -1.01
ECHDC1-210ENST00000454859 LRRC59Q96AG4 307 aaKnown RBP8.75□□□□□ -1.01
ECHDC1-210ENST00000454859 MBIPQ9NS73 344 aa8.75□□□□□ -1.01
ECHDC1-210ENST00000454859 PTPRCP08575 1304 aa8.74□□□□□ -1.01
ECHDC1-210ENST00000454859 TAF7Q15545 349 aaPredicted RBP8.74□□□□□ -1.01
ECHDC1-210ENST00000454859 ATF7IPQ6VMQ6 1270 aa8.74□□□□□ -1.01
ECHDC1-210ENST00000454859 API5Q9BZZ5 524 aaKnown RBP8.74□□□□□ -1.01
ECHDC1-210ENST00000454859 SMC4Q9NTJ3 1288 aa8.74□□□□□ -1.01
ECHDC1-210ENST00000454859 DDX19BQ9UMR2 479 aa8.74□□□□□ -1.01
ECHDC1-210ENST00000454859 PLCH1Q4KWH8 1693 aa8.74□□□□□ -1.01
ECHDC1-210ENST00000454859 NBPF6Q5VWK0 638 aa8.74□□□□□ -1.01
ECHDC1-210ENST00000454859 DZIP1LQ8IYY4 767 aaKnown RBP8.74□□□□□ -1.01
ECHDC1-210ENST00000454859 NBPF4Q96M43 638 aa8.74□□□□□ -1.01
ECHDC1-210ENST00000454859 CRBNQ96SW2 442 aa8.74□□□□□ -1.01
ECHDC1-210ENST00000454859 RNF39Q9H2S5 420 aa8.74□□□□□ -1.01
ECHDC1-210ENST00000454859 SPG7Q9UQ90 795 aa8.74□□□□□ -1.01
ECHDC1-210ENST00000454859 MRC1P22897 1456 aa8.73□□□□□ -1.01
ECHDC1-210ENST00000454859 IBTKQ9P2D0 1353 aaPredicted RBP8.73□□□□□ -1.01
ECHDC1-210ENST00000454859 SOX12O15370 315 aa8.73□□□□□ -1.01
ECHDC1-210ENST00000454859 BCAR3O75815 825 aa8.73□□□□□ -1.01
ECHDC1-210ENST00000454859 TWISTNBQ3B726 338 aaPredicted RBP8.73□□□□□ -1.01
ECHDC1-210ENST00000454859 EXOC6Q8TAG9 804 aa8.73□□□□□ -1.01
ECHDC1-210ENST00000454859 C1orf141Q5JVX7 400 aa8.72□□□□□ -1.01
ECHDC1-210ENST00000454859 LMOD2Q6P5Q4 547 aa8.72□□□□□ -1.01
ECHDC1-210ENST00000454859 SSH1Q8WYL5 1049 aa8.72□□□□□ -1.01
ECHDC1-210ENST00000454859 RAPGEF4Q8WZA2 1011 aa8.72□□□□□ -1.01
ECHDC1-210ENST00000454859 NWD2Q9ULI1 1742 aa8.72□□□□□ -1.01
ECHDC1-210ENST00000454859 TATP17735 454 aaPredicted RBP8.72□□□□□ -1.01
ECHDC1-210ENST00000454859 MVPQ14764 893 aaKnown RBP8.72□□□□□ -1.01
ECHDC1-210ENST00000454859 TSR2Q969E8 191 aaKnown RBP8.72□□□□□ -1.01
ECHDC1-210ENST00000454859 WDR17Q8IZU2 1322 aa8.72□□□□□ -1.01
ECHDC1-210ENST00000454859 IRX6P78412 446 aaPredicted RBP8.71□□□□□ -1.01
ECHDC1-210ENST00000454859 FTSJ3Q8IY81 847 aaKnown RBP8.71□□□□□ -1.01
ECHDC1-210ENST00000454859 MRPL50Q8N5N7 158 aaKnown RBP8.71□□□□□ -1.01
ECHDC1-210ENST00000454859 CLUAP1Q96AJ1 413 aa8.71□□□□□ -1.01
ECHDC1-210ENST00000454859 PXDNLA1KZ92 1463 aa8.71□□□□□ -1.01
ECHDC1-210ENST00000454859 PHLPP1O60346 1717 aa8.71□□□□□ -1.02
ECHDC1-210ENST00000454859 COL16A1Q07092 1604 aaPredicted RBP8.71□□□□□ -1.02
ECHDC1-210ENST00000454859 TCERG1O14776 1098 aaKnown RBP8.71□□□□□ -1.02
ECHDC1-210ENST00000454859 TOM1O60784 492 aa8.71□□□□□ -1.02
ECHDC1-210ENST00000454859 XPCQ01831 940 aaPredicted RBP8.71□□□□□ -1.02
ECHDC1-210ENST00000454859 CARD10Q9BWT7 1032 aa8.71□□□□□ -1.02
ECHDC1-210ENST00000454859 COL5A2P05997 1499 aaPredicted RBP8.71□□□□□ -1.02
ECHDC1-210ENST00000454859 TSPYL4Q9UJ04 414 aa8.7□□□□□ -1.02
ECHDC1-210ENST00000454859 KDM2BQ8NHM5 1336 aa8.7□□□□□ -1.02
ECHDC1-210ENST00000454859 PLIN1O60240 522 aa8.7□□□□□ -1.02
ECHDC1-210ENST00000454859 C1QBPQ07021 282 aaKnown RBP8.7□□□□□ -1.02
ECHDC1-210ENST00000454859 CCDC30Q5VVM6 783 aa8.7□□□□□ -1.02
ECHDC1-210ENST00000454859 ABCC4O15439 1325 aa8.7□□□□□ -1.02
ECHDC1-210ENST00000454859 WNK3Q9BYP7 1800 aa8.69□□□□□ -1.02
ECHDC1-210ENST00000454859 SENP3-EIF4A1A0A087X0R7 540 aa8.69□□□□□ -1.02
ECHDC1-210ENST00000454859 B4GALNT3Q6L9W6 998 aa8.69□□□□□ -1.02
ECHDC1-210ENST00000454859 ZNF530Q6P9A1 599 aaPredicted RBP8.69□□□□□ -1.02
ECHDC1-210ENST00000454859 IL17REQ8NFR9 667 aa8.69□□□□□ -1.02
ECHDC1-210ENST00000454859 CDCA7Q9BWT1 371 aaPredicted RBP8.69□□□□□ -1.02
ECHDC1-210ENST00000454859 RWDD1Q9H446 243 aaPredicted RBP8.69□□□□□ -1.02
ECHDC1-210ENST00000454859 PRDM11Q9NQV5 511 aa8.69□□□□□ -1.02
ECHDC1-210ENST00000454859 AXIN2Q9Y2T1 843 aa8.69□□□□□ -1.02
ECHDC1-210ENST00000454859 LRP6O75581 1613 aa8.69□□□□□ -1.02
ECHDC1-210ENST00000454859 RNMTO43148 476 aaKnown RBP8.69□□□□□ -1.02
ECHDC1-210ENST00000454859 TRIM27P14373 513 aa8.69□□□□□ -1.02
ECHDC1-210ENST00000454859 HDAC1Q13547 482 aaPredicted RBP8.69□□□□□ -1.02
ECHDC1-210ENST00000454859 IFNL2Q8IZJ0 200 aa8.69□□□□□ -1.02
ECHDC1-210ENST00000454859 LTV1Q96GA3 475 aaPredicted RBP8.69□□□□□ -1.02
ECHDC1-210ENST00000454859 LAS1LQ9Y4W2 734 aaKnown RBP8.69□□□□□ -1.02
ECHDC1-210ENST00000454859 HEG1Q9ULI3 1381 aa8.69□□□□□ -1.02
ECHDC1-210ENST00000454859 FAM83GA6ND36 823 aa8.68□□□□□ -1.02
ECHDC1-210ENST00000454859 ZC3H6P61129 1189 aaKnown RBP8.68□□□□□ -1.02
ECHDC1-210ENST00000454859 TEFQ10587 303 aa8.68□□□□□ -1.02
ECHDC1-210ENST00000454859 INTS3Q68E01 1043 aaKnown RBP8.68□□□□□ -1.02
ECHDC1-210ENST00000454859 MCM10Q7L590 875 aa8.68□□□□□ -1.02
ECHDC1-210ENST00000454859 C8orf58Q8NAV2 365 aa8.68□□□□□ -1.02
ECHDC1-210ENST00000454859 FRAT1Q92837 279 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms