RNA–Protein interactions for RNA: ENST00000454561.2

TRBV5-4-201, Transcript of T cell receptor beta variable 5-4, humanhuman

APPRIS P1 BASIC

Gene TRBV5-4, Length 544 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4-201ENST00000454561 PTF1AQ7RTS3 328 aa10.14□□□□□ -0.79
TRBV5-4-201ENST00000454561 ACSBG1Q96GR2 724 aa10.14□□□□□ -0.79
TRBV5-4-201ENST00000454561 PARD3Q8TEW0 1356 aa10.14□□□□□ -0.79
TRBV5-4-201ENST00000454561 NPC1L1Q9UHC9 1359 aa10.14□□□□□ -0.79
TRBV5-4-201ENST00000454561 BTAF1O14981 1849 aa10.13□□□□□ -0.79
TRBV5-4-201ENST00000454561 KCNQ2O43526 872 aa10.13□□□□□ -0.79
TRBV5-4-201ENST00000454561 CNGB1Q14028 1251 aaPredicted RBP10.13□□□□□ -0.79
TRBV5-4-201ENST00000454561 SHANK3Q9BYB0 1731 aa10.13□□□□□ -0.79
TRBV5-4-201ENST00000454561 ZEB1P37275 1124 aaPredicted RBP10.12□□□□□ -0.79
TRBV5-4-201ENST00000454561 MTHFSP49914 203 aa10.12□□□□□ -0.79
TRBV5-4-201ENST00000454561 NBPF14Q5TI25 921 aa10.12□□□□□ -0.79
TRBV5-4-201ENST00000454561 MEGF6O75095 1541 aa10.12□□□□□ -0.79
TRBV5-4-201ENST00000454561 ITGB4P16144 1822 aa10.12□□□□□ -0.79
TRBV5-4-201ENST00000454561 RGPD3A6NKT7 1758 aaPredicted RBP10.11□□□□□ -0.79
TRBV5-4-201ENST00000454561 RGPD4Q7Z3J3 1758 aa10.11□□□□□ -0.79
TRBV5-4-201ENST00000454561 PRIM1P49642 420 aaKnown RBP10.11□□□□□ -0.79
TRBV5-4-201ENST00000454561 PIAS4Q8N2W9 510 aaPredicted RBP10.11□□□□□ -0.79
TRBV5-4-201ENST00000454561 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.11□□□□□ -0.79
TRBV5-4-201ENST00000454561 SPG7Q9UQ90 795 aa10.11□□□□□ -0.79
TRBV5-4-201ENST00000454561 NHSQ6T4R5 1651 aa10.11□□□□□ -0.79
TRBV5-4-201ENST00000454561 PCDH11XQ9BZA7 1347 aa10.1□□□□□ -0.79
TRBV5-4-201ENST00000454561 PCDH11YQ9BZA8 1340 aa10.1□□□□□ -0.79
TRBV5-4-201ENST00000454561 NCAPD2Q15021 1401 aa10.1□□□□□ -0.79
TRBV5-4-201ENST00000454561 RREB1Q92766 1687 aa10.1□□□□□ -0.79
TRBV5-4-201ENST00000454561 SYTL4Q96C24 671 aaPredicted RBP10.1□□□□□ -0.79
TRBV5-4-201ENST00000454561 IGSF1Q8N6C5 1336 aa10.09□□□□□ -0.79
TRBV5-4-201ENST00000454561 PSDA5PKW4 1024 aaPredicted RBP10.09□□□□□ -0.79
TRBV5-4-201ENST00000454561 CYP27B1O15528 508 aa10.09□□□□□ -0.79
TRBV5-4-201ENST00000454561 IL13P35225 146 aa10.09□□□□□ -0.79
TRBV5-4-201ENST00000454561 PROM2Q8N271 834 aa10.09□□□□□ -0.79
TRBV5-4-201ENST00000454561 NUP188Q5SRE5 1749 aa10.09□□□□□ -0.79
TRBV5-4-201ENST00000454561 PKD1L3Q7Z443 1732 aa10.09□□□□□ -0.79
TRBV5-4-201ENST00000454561 SRCAPQ6ZRS2 3230 aa10.09□□□□□ -0.79
TRBV5-4-201ENST00000454561 DOT1LQ8TEK3 1739 aa10.08□□□□□ -0.8
TRBV5-4-201ENST00000454561 R3HDM1Q15032 1099 aaKnown RBP10.08□□□□□ -0.8
TRBV5-4-201ENST00000454561 TXNRD1Q16881 649 aa10.08□□□□□ -0.8
TRBV5-4-201ENST00000454561 PLEKHO1Q53GL0 409 aaPredicted RBP10.08□□□□□ -0.8
TRBV5-4-201ENST00000454561 VIRMAQ69YN4 1812 aaKnown RBP10.07□□□□□ -0.8
TRBV5-4-201ENST00000454561 DIAPH1O60610 1272 aaKnown RBP10.07□□□□□ -0.8
TRBV5-4-201ENST00000454561 NKX1-1Q15270 411 aaPredicted RBP10.07□□□□□ -0.8
TRBV5-4-201ENST00000454561 AMOTQ4VCS5 1084 aa10.07□□□□□ -0.8
TRBV5-4-201ENST00000454561 SULT6B1Q6IMI4 303 aa10.07□□□□□ -0.8
TRBV5-4-201ENST00000454561 IFNL2Q8IZJ0 200 aa10.07□□□□□ -0.8
TRBV5-4-201ENST00000454561 PLEKHG2Q9H7P9 1386 aa10.06□□□□□ -0.8
TRBV5-4-201ENST00000454561 MPRIPQ6WCQ1 1025 aa10.06□□□□□ -0.8
TRBV5-4-201ENST00000454561 AEBP1Q8IUX7 1158 aa10.06□□□□□ -0.8
TRBV5-4-201ENST00000454561 PHKG2P15735 406 aa10.05□□□□□ -0.8
TRBV5-4-201ENST00000454561 DDX10Q13206 875 aaKnown RBP10.05□□□□□ -0.8
TRBV5-4-201ENST00000454561 SLC27A3Q5K4L6 730 aa10.05□□□□□ -0.8
TRBV5-4-201ENST00000454561 CFAP53Q96M91 514 aa10.05□□□□□ -0.8
TRBV5-4-201ENST00000454561 LY75O60449 1722 aa10.04□□□□□ -0.8
TRBV5-4-201ENST00000454561 HSP90AB1P08238 724 aaKnown RBP10.04□□□□□ -0.8
TRBV5-4-201ENST00000454561 HMOX1P09601 288 aa10.04□□□□□ -0.8
TRBV5-4-201ENST00000454561 PPP2R1AP30153 589 aa10.04□□□□□ -0.8
TRBV5-4-201ENST00000454561 ZNF530Q6P9A1 599 aaPredicted RBP10.04□□□□□ -0.8
TRBV5-4-201ENST00000454561 STK32BQ9NY57 414 aa10.04□□□□□ -0.8
TRBV5-4-201ENST00000454561 KDRP35968 1356 aa10.03□□□□□ -0.8
TRBV5-4-201ENST00000454561 ERVV-2B6SEH9 535 aa10.03□□□□□ -0.8
TRBV5-4-201ENST00000454561 U2SURPO15042 1029 aaKnown RBP10.03□□□□□ -0.8
TRBV5-4-201ENST00000454561 HMGB2P26583 209 aaKnown RBP10.03□□□□□ -0.8
TRBV5-4-201ENST00000454561 SLC15A2Q16348 729 aa10.03□□□□□ -0.8
TRBV5-4-201ENST00000454561 C1orf141Q5JVX7 400 aa10.03□□□□□ -0.8
TRBV5-4-201ENST00000454561 PIGBQ92521 554 aa10.03□□□□□ -0.8
TRBV5-4-201ENST00000454561 SMARCC1Q92922 1105 aaPredicted RBP10.03□□□□□ -0.8
TRBV5-4-201ENST00000454561 DCAF5Q96JK2 942 aa10.03□□□□□ -0.8
TRBV5-4-201ENST00000454561 NUDCQ9Y266 331 aa10.03□□□□□ -0.8
TRBV5-4-201ENST00000454561 TAF1LQ8IZX4 1826 aa10.03□□□□□ -0.8
TRBV5-4-201ENST00000454561 TOGARAM1Q9Y4F4 1720 aa10.02□□□□□ -0.8
TRBV5-4-201ENST00000454561 SCN11AQ9UI33 1791 aa10.02□□□□□ -0.81
TRBV5-4-201ENST00000454561 ANO8Q9HCE9 1232 aaPredicted RBP10.02□□□□□ -0.81
TRBV5-4-201ENST00000454561 LRRC4BQ9NT99 713 aa10.02□□□□□ -0.81
TRBV5-4-201ENST00000454561 TMOD3Q9NYL9 352 aa10.02□□□□□ -0.81
TRBV5-4-201ENST00000454561 CCNL1Q9UK58 526 aaPredicted RBP10.01□□□□□ -0.81
TRBV5-4-201ENST00000454561 KCNQ4P56696 695 aa10□□□□□ -0.81
TRBV5-4-201ENST00000454561 CABP4P57796 275 aa10□□□□□ -0.81
TRBV5-4-201ENST00000454561 RALBP1Q15311 655 aa10□□□□□ -0.81
TRBV5-4-201ENST00000454561 AKAP4Q5JQC9 854 aa10□□□□□ -0.81
TRBV5-4-201ENST00000454561 COL3A1P02461 1466 aaPredicted RBP9.99□□□□□ -0.81
TRBV5-4-201ENST00000454561 SPON1Q9HCB6 807 aa9.99□□□□□ -0.81
TRBV5-4-201ENST00000454561 PALLDQ8WX93 1383 aa9.99□□□□□ -0.81
TRBV5-4-201ENST00000454561 LRP5O75197 1615 aa9.98□□□□□ -0.81
TRBV5-4-201ENST00000454561 FCHSD2O94868 740 aa9.98□□□□□ -0.81
TRBV5-4-201ENST00000454561 U2AF1L5P0DN76 240 aaPredicted RBP9.98□□□□□ -0.81
TRBV5-4-201ENST00000454561 U2AF1Q01081 240 aaKnown RBP eCLIP9.98□□□□□ -0.81
TRBV5-4-201ENST00000454561 MTHFSDQ2M296 383 aaKnown RBP9.98□□□□□ -0.81
TRBV5-4-201ENST00000454561 NFATC2IPQ8NCF5 419 aa9.98□□□□□ -0.81
TRBV5-4-201ENST00000454561 AKT1S1Q96B36 256 aa9.98□□□□□ -0.81
TRBV5-4-201ENST00000454561 TFCP2L1Q9NZI6 479 aa9.98□□□□□ -0.81
TRBV5-4-201ENST00000454561 ASAP1Q9ULH1 1129 aa9.98□□□□□ -0.81
TRBV5-4-201ENST00000454561 QSER1Q2KHR3 1735 aa9.98□□□□□ -0.81
TRBV5-4-201ENST00000454561 TUBGCP6Q96RT7 1819 aa9.98□□□□□ -0.81
TRBV5-4-201ENST00000454561 C5P01031 1676 aa9.97□□□□□ -0.81
TRBV5-4-201ENST00000454561 LOC102724428A0A0B4J2F2 783 aa9.97□□□□□ -0.81
TRBV5-4-201ENST00000454561 MSH5O43196 834 aa9.97□□□□□ -0.81
TRBV5-4-201ENST00000454561 SIK1P57059 783 aa9.97□□□□□ -0.81
TRBV5-4-201ENST00000454561 ZNF827Q17R98 1081 aa9.97□□□□□ -0.81
TRBV5-4-201ENST00000454561 PDGFDQ9GZP0 370 aaPredicted RBP9.97□□□□□ -0.81
TRBV5-4-201ENST00000454561 LGR6Q9HBX8 967 aa9.97□□□□□ -0.81
TRBV5-4-201ENST00000454561 ATG3Q9NT62 314 aa9.97□□□□□ -0.81
TRBV5-4-201ENST00000454561 MYH14Q7Z406 1995 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms