RNA–Protein interactions for RNA: ENST00000454141.5

SEC22C-212, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 780 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-212ENST00000454141 CCER1Q8TC90 406 aaPredicted RBP25.38■■□□□ 1.65
SEC22C-212ENST00000454141 SHANK3Q9BYB0 1731 aa25.37■■□□□ 1.65
SEC22C-212ENST00000454141 CGNL1Q0VF96 1302 aa25.37■■□□□ 1.65
SEC22C-212ENST00000454141 ZBTB7AO95365 584 aa25.36■■□□□ 1.65
SEC22C-212ENST00000454141 RAPGEF4Q8WZA2 1011 aa25.36■■□□□ 1.65
SEC22C-212ENST00000454141 DOT1LQ8TEK3 1739 aa25.35■■□□□ 1.65
SEC22C-212ENST00000454141 EIF4G2P78344 907 aaKnown RBP eCLIP25.35■■□□□ 1.65
SEC22C-212ENST00000454141 EMILIN1Q9Y6C2 1016 aa25.35■■□□□ 1.65
SEC22C-212ENST00000454141 SYTL4Q96C24 671 aaPredicted RBP25.34■■□□□ 1.65
SEC22C-212ENST00000454141 POLR3GLQ9BT43 218 aa25.34■■□□□ 1.65
SEC22C-212ENST00000454141 PRIM1P49642 420 aaKnown RBP25.33■■□□□ 1.65
SEC22C-212ENST00000454141 LRRC4BQ9NT99 713 aa25.33■■□□□ 1.65
SEC22C-212ENST00000454141 NSD2O96028 1365 aa25.32■■□□□ 1.64
SEC22C-212ENST00000454141 HSPA5P11021 654 aaKnown RBP25.32■■□□□ 1.64
SEC22C-212ENST00000454141 TATP17735 454 aaPredicted RBP25.32■■□□□ 1.64
SEC22C-212ENST00000454141 SLC27A3Q5K4L6 730 aa25.31■■□□□ 1.64
SEC22C-212ENST00000454141 ANKRD26Q9UPS8 1709 aa25.3■■□□□ 1.64
SEC22C-212ENST00000454141 PTGER2P43116 358 aa25.3■■□□□ 1.64
SEC22C-212ENST00000454141 ZNF827Q17R98 1081 aa25.3■■□□□ 1.64
SEC22C-212ENST00000454141 ATF5Q9Y2D1 282 aaPredicted RBP25.3■■□□□ 1.64
SEC22C-212ENST00000454141 PPM1GO15355 546 aaPredicted RBP25.29■■□□□ 1.64
SEC22C-212ENST00000454141 MTFR1LQ9H019 292 aa25.29■■□□□ 1.64
SEC22C-212ENST00000454141 PCDH11XQ9BZA7 1347 aa25.28■■□□□ 1.64
SEC22C-212ENST00000454141 PCDH11YQ9BZA8 1340 aa25.28■■□□□ 1.64
SEC22C-212ENST00000454141 NCAPD2Q15021 1401 aa25.27■■□□□ 1.64
SEC22C-212ENST00000454141 WASHC2AQ641Q2 1341 aa25.26■■□□□ 1.63
SEC22C-212ENST00000454141 KAT6BQ8WYB5 2073 aa25.25■■□□□ 1.63
SEC22C-212ENST00000454141 AKT1S1Q96B36 256 aa25.25■■□□□ 1.63
SEC22C-212ENST00000454141 SGIP1Q9BQI5 828 aa25.23■■□□□ 1.63
SEC22C-212ENST00000454141 POLKQ9UBT6 870 aa25.23■■□□□ 1.63
SEC22C-212ENST00000454141 LY75O60449 1722 aa25.23■■□□□ 1.63
SEC22C-212ENST00000454141 KCNQ4P56696 695 aa25.22■■□□□ 1.63
SEC22C-212ENST00000454141 PKD1L3Q7Z443 1732 aa25.21■■□□□ 1.63
SEC22C-212ENST00000454141 CYP27B1O15528 508 aa25.21■■□□□ 1.63
SEC22C-212ENST00000454141 DCAF8L1A6NGE4 600 aa25.2■■□□□ 1.62
SEC22C-212ENST00000454141 PANK3Q9H999 370 aa25.2■■□□□ 1.62
SEC22C-212ENST00000454141 CCNL1Q9UK58 526 aaPredicted RBP25.2■■□□□ 1.62
SEC22C-212ENST00000454141 TNNT2P45379 298 aaPredicted RBP25.19■■□□□ 1.62
SEC22C-212ENST00000454141 EYA1Q99502 592 aa25.19■■□□□ 1.62
SEC22C-212ENST00000454141 QSER1Q2KHR3 1735 aa25.19■■□□□ 1.62
SEC22C-212ENST00000454141 PNPLA7Q6ZV29 1317 aa25.18■■□□□ 1.62
SEC22C-212ENST00000454141 TFCP2L1Q9NZI6 479 aa25.18■■□□□ 1.62
SEC22C-212ENST00000454141 MAP2P11137 1827 aaKnown RBP25.17■■□□□ 1.62
SEC22C-212ENST00000454141 FHDC1Q9C0D6 1143 aaPredicted RBP25.17■■□□□ 1.62
SEC22C-212ENST00000454141 SLC16A10Q8TF71 515 aa25.16■■□□□ 1.62
SEC22C-212ENST00000454141 SPG7Q9UQ90 795 aa25.16■■□□□ 1.62
SEC22C-212ENST00000454141 TOGARAM1Q9Y4F4 1720 aa25.15■■□□□ 1.62
SEC22C-212ENST00000454141 EIF4A2Q14240 407 aaKnown RBP25.15■■□□□ 1.62
SEC22C-212ENST00000454141 ARXQ96QS3 562 aa25.15■■□□□ 1.62
SEC22C-212ENST00000454141 MPRIPQ6WCQ1 1025 aa25.14■■□□□ 1.62
SEC22C-212ENST00000454141 SYT17Q9BSW7 474 aa25.14■■□□□ 1.62
SEC22C-212ENST00000454141 PALLDQ8WX93 1383 aa25.14■■□□□ 1.61
SEC22C-212ENST00000454141 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.13■■□□□ 1.61
SEC22C-212ENST00000454141 TUBGCP6Q96RT7 1819 aa25.13■■□□□ 1.61
SEC22C-212ENST00000454141 NKX1-1Q15270 411 aaPredicted RBP25.12■■□□□ 1.61
SEC22C-212ENST00000454141 MAP3K5Q99683 1374 aa25.11■■□□□ 1.61
SEC22C-212ENST00000454141 YY1P25490 414 aa25.11■■□□□ 1.61
SEC22C-212ENST00000454141 PLEKHG2Q9H7P9 1386 aa25.09■■□□□ 1.61
SEC22C-212ENST00000454141 POLD1P28340 1107 aa25.09■■□□□ 1.61
SEC22C-212ENST00000454141 IGSF1Q8N6C5 1336 aa25.09■■□□□ 1.61
SEC22C-212ENST00000454141 C5P01031 1676 aa25.08■■□□□ 1.61
SEC22C-212ENST00000454141 SMARCC1Q92922 1105 aaPredicted RBP25.08■■□□□ 1.61
SEC22C-212ENST00000454141 HMGB2P26583 209 aaKnown RBP25.07■■□□□ 1.6
SEC22C-212ENST00000454141 MORC1Q86VD1 984 aa25.07■■□□□ 1.6
SEC22C-212ENST00000454141 PIGBQ92521 554 aa25.07■■□□□ 1.6
SEC22C-212ENST00000454141 KNSTRNQ9Y448 316 aa25.07■■□□□ 1.6
SEC22C-212ENST00000454141 COL24A1Q17RW2 1714 aa25.06■■□□□ 1.6
SEC22C-212ENST00000454141 PHKG2P15735 406 aa25.06■■□□□ 1.6
SEC22C-212ENST00000454141 IFNL2Q8IZJ0 200 aa25.06■■□□□ 1.6
SEC22C-212ENST00000454141 ITGB4P16144 1822 aa25.06■■□□□ 1.6
SEC22C-212ENST00000454141 UTRNP46939 3433 aa25.06■■□□□ 1.6
SEC22C-212ENST00000454141 MSH5O43196 834 aa25.04■■□□□ 1.6
SEC22C-212ENST00000454141 COL23A1Q86Y22 540 aaPredicted RBP25.04■■□□□ 1.6
SEC22C-212ENST00000454141 KIF7Q2M1P5 1343 aa25.04■■□□□ 1.6
SEC22C-212ENST00000454141 TMOD3Q9NYL9 352 aa25.03■■□□□ 1.6
SEC22C-212ENST00000454141 C4BP0C0L5 1744 aa25■■□□□ 1.59
SEC22C-212ENST00000454141 TAF1LQ8IZX4 1826 aa25■■□□□ 1.59
SEC22C-212ENST00000454141 KLHL34Q8N239 644 aa25■■□□□ 1.59
SEC22C-212ENST00000454141 FLAD1Q8NFF5 587 aa25■■□□□ 1.59
SEC22C-212ENST00000454141 AMER1Q5JTC6 1135 aaPredicted RBP24.99■■□□□ 1.59
SEC22C-212ENST00000454141 AK7Q96M32 723 aa24.99■■□□□ 1.59
SEC22C-212ENST00000454141 LOC102724428A0A0B4J2F2 783 aa24.98■■□□□ 1.59
SEC22C-212ENST00000454141 SIK1P57059 783 aa24.98■■□□□ 1.59
SEC22C-212ENST00000454141 PLEKHO1Q53GL0 409 aaPredicted RBP24.97■■□□□ 1.59
SEC22C-212ENST00000454141 ASAP1Q9ULH1 1129 aa24.97■■□□□ 1.59
SEC22C-212ENST00000454141 MSL1Q68DK7 614 aa24.96■■□□□ 1.59
SEC22C-212ENST00000454141 HSP90AB1P08238 724 aaKnown RBP24.95■■□□□ 1.58
SEC22C-212ENST00000454141 AMOTQ4VCS5 1084 aa24.95■■□□□ 1.58
SEC22C-212ENST00000454141 AEBP1Q8IUX7 1158 aa24.95■■□□□ 1.58
SEC22C-212ENST00000454141 ZNF530Q6P9A1 599 aaPredicted RBP24.94■■□□□ 1.58
SEC22C-212ENST00000454141 LINC00116Q8NCU8 138 aa24.94■■□□□ 1.58
SEC22C-212ENST00000454141 DCAF5Q96JK2 942 aa24.94■■□□□ 1.58
SEC22C-212ENST00000454141 ATG3Q9NT62 314 aa24.94■■□□□ 1.58
SEC22C-212ENST00000454141 ERVV-2B6SEH9 535 aa24.93■■□□□ 1.58
SEC22C-212ENST00000454141 AMIGO3Q86WK7 504 aa24.93■■□□□ 1.58
SEC22C-212ENST00000454141 GOLGB1Q14789 3259 aaKnown RBP24.93■■□□□ 1.58
SEC22C-212ENST00000454141 KDRP35968 1356 aa24.93■■□□□ 1.58
SEC22C-212ENST00000454141 PHF14O94880 888 aa24.92■■□□□ 1.58
SEC22C-212ENST00000454141 GPR162Q16538 588 aa24.92■■□□□ 1.58
SEC22C-212ENST00000454141 NLGN2Q8NFZ4 835 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms