RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 TBC1D32Q96NH3 1257 aa14.22□□□□□ -0.13
SEC16A-207ENST00000453963 RDXP35241 583 aaKnown RBP14.22□□□□□ -0.13
SEC16A-207ENST00000453963 JAKMIP1Q96N16 626 aaKnown RBP14.22□□□□□ -0.13
SEC16A-207ENST00000453963 PLEKHH1Q9ULM0 1364 aa14.22□□□□□ -0.13
SEC16A-207ENST00000453963 FAM177BA6PVY3 158 aa14.22□□□□□ -0.13
SEC16A-207ENST00000453963 PPFIBP1Q86W92 1011 aa14.21□□□□□ -0.13
SEC16A-207ENST00000453963 NUDT16Q96DE0 195 aaKnown RBP14.21□□□□□ -0.13
SEC16A-207ENST00000453963 SSFA2P28290 1259 aa14.21□□□□□ -0.13
SEC16A-207ENST00000453963 STK3Q13188 491 aa14.21□□□□□ -0.13
SEC16A-207ENST00000453963 KIF6Q6ZMV9 814 aa14.21□□□□□ -0.13
SEC16A-207ENST00000453963 FILIP1Q7Z7B0 1213 aa14.21□□□□□ -0.13
SEC16A-207ENST00000453963 NSD3Q9BZ95 1437 aa14.21□□□□□ -0.13
SEC16A-207ENST00000453963 AXDND1Q5T1B0 1012 aaPredicted RBP14.21□□□□□ -0.13
SEC16A-207ENST00000453963 DDX54Q8TDD1 881 aaKnown RBP14.21□□□□□ -0.14
SEC16A-207ENST00000453963 SPG7Q9UQ90 795 aa14.21□□□□□ -0.14
SEC16A-207ENST00000453963 CABP4P57796 275 aa14.2□□□□□ -0.14
SEC16A-207ENST00000453963 UPF3BQ9BZI7 483 aaKnown RBP14.2□□□□□ -0.14
SEC16A-207ENST00000453963 FYB1O15117 783 aa14.2□□□□□ -0.14
SEC16A-207ENST00000453963 CLCN1P35523 988 aa14.2□□□□□ -0.14
SEC16A-207ENST00000453963 TXLNAP40222 546 aa14.2□□□□□ -0.14
SEC16A-207ENST00000453963 RRS1Q15050 365 aaKnown RBP14.2□□□□□ -0.14
SEC16A-207ENST00000453963 MYO6Q9UM54 1294 aa14.2□□□□□ -0.14
SEC16A-207ENST00000453963 SMTNL1A8MU46 457 aa14.2□□□□□ -0.14
SEC16A-207ENST00000453963 ATP2B1P20020 1258 aa14.2□□□□□ -0.14
SEC16A-207ENST00000453963 XPCQ01831 940 aaPredicted RBP14.2□□□□□ -0.14
SEC16A-207ENST00000453963 UBXN4Q92575 508 aa14.2□□□□□ -0.14
SEC16A-207ENST00000453963 ZNHIT6Q9NWK9 470 aaKnown RBP14.2□□□□□ -0.14
SEC16A-207ENST00000453963 MAGEC2Q9UBF1 373 aaPredicted RBP14.2□□□□□ -0.14
SEC16A-207ENST00000453963 GRIN2AQ12879 1464 aa14.19□□□□□ -0.14
SEC16A-207ENST00000453963 CCDC191Q8NCU4 936 aa14.19□□□□□ -0.14
SEC16A-207ENST00000453963 BICRAQ9NZM4 1560 aa14.19□□□□□ -0.14
SEC16A-207ENST00000453963 KLHL40Q2TBA0 621 aa14.19□□□□□ -0.14
SEC16A-207ENST00000453963 ODF2Q5BJF6 829 aa14.19□□□□□ -0.14
SEC16A-207ENST00000453963 SRGAP3O43295 1099 aa14.19□□□□□ -0.14
SEC16A-207ENST00000453963 EPS15P42566 896 aa14.19□□□□□ -0.14
SEC16A-207ENST00000453963 BMP2KLQ5H9B9 411 aa14.19□□□□□ -0.14
SEC16A-207ENST00000453963 SCAND2PQ9GZW5 306 aaPredicted RBP14.18□□□□□ -0.14
SEC16A-207ENST00000453963 RPRD2Q5VT52 1461 aaKnown RBP14.18□□□□□ -0.14
SEC16A-207ENST00000453963 RRP12Q5JTH9 1297 aaKnown RBP14.18□□□□□ -0.14
SEC16A-207ENST00000453963 BRPF1P55201 1214 aaPredicted RBP14.18□□□□□ -0.14
SEC16A-207ENST00000453963 CWC27Q6UX04 472 aaKnown RBP14.18□□□□□ -0.14
SEC16A-207ENST00000453963 PTPN14Q15678 1187 aa14.18□□□□□ -0.14
SEC16A-207ENST00000453963 KLHL34Q8N239 644 aa14.18□□□□□ -0.14
SEC16A-207ENST00000453963 TSPYL1Q9H0U9 437 aa14.18□□□□□ -0.14
SEC16A-207ENST00000453963 SAMD1Q6SPF0 538 aaPredicted RBP14.17□□□□□ -0.14
SEC16A-207ENST00000453963 MX1P20591 662 aa14.17□□□□□ -0.14
SEC16A-207ENST00000453963 MAP4K4O95819 1239 aaPredicted RBP14.17□□□□□ -0.14
SEC16A-207ENST00000453963 IL1RAPL2Q9NP60 686 aa14.17□□□□□ -0.14
SEC16A-207ENST00000453963 SLC3A2P08195 630 aaKnown RBP14.17□□□□□ -0.14
SEC16A-207ENST00000453963 CCDC158Q5M9N0 1113 aa14.17□□□□□ -0.14
SEC16A-207ENST00000453963 TRIM22Q8IYM9 498 aa14.17□□□□□ -0.14
SEC16A-207ENST00000453963 SH2B1Q9NRF2 756 aaPredicted RBP14.17□□□□□ -0.14
SEC16A-207ENST00000453963 NUTM2BA6NNL0 878 aaPredicted RBP14.16□□□□□ -0.14
SEC16A-207ENST00000453963 NUTM2EB1AL46 878 aaPredicted RBP14.16□□□□□ -0.14
SEC16A-207ENST00000453963 BAG4O95429 457 aaKnown RBP14.16□□□□□ -0.14
SEC16A-207ENST00000453963 WAPLQ7Z5K2 1190 aa14.16□□□□□ -0.14
SEC16A-207ENST00000453963 NUTM2AQ8IVF1 878 aaPredicted RBP14.16□□□□□ -0.14
SEC16A-207ENST00000453963 ABCC5O15440 1437 aa14.16□□□□□ -0.14
SEC16A-207ENST00000453963 ADGRL1O94910 1474 aa14.16□□□□□ -0.14
SEC16A-207ENST00000453963 ZC3H6P61129 1189 aaKnown RBP14.16□□□□□ -0.14
SEC16A-207ENST00000453963 TMCO3Q6UWJ1 677 aa14.16□□□□□ -0.14
SEC16A-207ENST00000453963 KIF18AQ8NI77 898 aa14.16□□□□□ -0.14
SEC16A-207ENST00000453963 UBE2Q2Q8WVN8 375 aa14.16□□□□□ -0.14
SEC16A-207ENST00000453963 DYNC1I1O14576 645 aa14.16□□□□□ -0.14
SEC16A-207ENST00000453963 CASTP20810 708 aaKnown RBP14.16□□□□□ -0.14
SEC16A-207ENST00000453963 AACSQ86V21 672 aa14.16□□□□□ -0.14
SEC16A-207ENST00000453963 EXOC6BQ9Y2D4 811 aa14.16□□□□□ -0.14
SEC16A-207ENST00000453963 CAMSAP2Q08AD1 1489 aa14.16□□□□□ -0.14
SEC16A-207ENST00000453963 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.15□□□□□ -0.143e-7■■■□□ 14.7
SEC16A-207ENST00000453963 RAB11FIP3O75154 756 aa14.15□□□□□ -0.14
SEC16A-207ENST00000453963 GLRX3O76003 335 aaKnown RBP14.15□□□□□ -0.14
SEC16A-207ENST00000453963 CDKL5O76039 1030 aa14.15□□□□□ -0.14
SEC16A-207ENST00000453963 CALRP27797 417 aaKnown RBP14.15□□□□□ -0.14
SEC16A-207ENST00000453963 KIF1BPQ96EK5 621 aa14.15□□□□□ -0.14
SEC16A-207ENST00000453963 LUC7LQ9NQ29 371 aaKnown RBP14.15□□□□□ -0.14
SEC16A-207ENST00000453963 PCF11O94913 1555 aaKnown RBP14.15□□□□□ -0.14
SEC16A-207ENST00000453963 KIAA0754O94854 1291 aa14.15□□□□□ -0.14
SEC16A-207ENST00000453963 SFPQP23246 707 aaKnown RBP eCLIP14.15□□□□□ -0.14
SEC16A-207ENST00000453963 FAM177A1Q8N128 213 aaPredicted RBP14.15□□□□□ -0.14
SEC16A-207ENST00000453963 TXLNBQ8N3L3 684 aa14.15□□□□□ -0.14
SEC16A-207ENST00000453963 KCNH5Q8NCM2 988 aa14.15□□□□□ -0.14
SEC16A-207ENST00000453963 IGHDP01880 384 aa14.15□□□□□ -0.15
SEC16A-207ENST00000453963 TRIM27P14373 513 aa14.15□□□□□ -0.15
SEC16A-207ENST00000453963 IKQ13123 557 aaPredicted RBP14.15□□□□□ -0.15
SEC16A-207ENST00000453963 UVSSAQ2YD98 709 aa14.15□□□□□ -0.15
SEC16A-207ENST00000453963 CGNQ9P2M7 1197 aaKnown RBP14.15□□□□□ -0.15
SEC16A-207ENST00000453963 CTNNA3Q9UI47 895 aa14.15□□□□□ -0.15
SEC16A-207ENST00000453963 USP8P40818 1118 aa14.14□□□□□ -0.15
SEC16A-207ENST00000453963 CBX1P83916 185 aa14.14□□□□□ -0.15
SEC16A-207ENST00000453963 IDI1Q13907 227 aa14.14□□□□□ -0.15
SEC16A-207ENST00000453963 ANO10Q9NW15 660 aa14.14□□□□□ -0.15
SEC16A-207ENST00000453963 NEMFO60524 1076 aa14.14□□□□□ -0.15
SEC16A-207ENST00000453963 CNNM1Q9NRU3 951 aa14.14□□□□□ -0.15
SEC16A-207ENST00000453963 USP25Q9UHP3 1055 aa14.14□□□□□ -0.15
SEC16A-207ENST00000453963 MTMR7Q9Y216 660 aa14.14□□□□□ -0.15
SEC16A-207ENST00000453963 STIM1Q13586 685 aa14.14□□□□□ -0.15
SEC16A-207ENST00000453963 CUL7Q14999 1698 aa14.14□□□□□ -0.15
SEC16A-207ENST00000453963 PTPN23Q9H3S7 1636 aa14.14□□□□□ -0.15
SEC16A-207ENST00000453963 CCDC83Q8IWF9 413 aa14.13□□□□□ -0.15
SEC16A-207ENST00000453963 PRIMPOLQ96LW4 560 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms