RNA–Protein interactions for RNA: ENST00000453863.5

RNF220-206, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-206ENST00000453863 SHANK3Q9BYB0 1731 aa12.31□□□□□ -0.44
RNF220-206ENST00000453863 USHBP1Q8N6Y0 703 aa12.31□□□□□ -0.44
RNF220-206ENST00000453863 ZCRB1Q8TBF4 217 aaKnown RBP12.31□□□□□ -0.44
RNF220-206ENST00000453863 BCL11BQ9C0K0 894 aaPredicted RBP12.31□□□□□ -0.44
RNF220-206ENST00000453863 EN1Q05925 392 aaPredicted RBP12.3□□□□□ -0.44
RNF220-206ENST00000453863 CC2D1BQ5T0F9 858 aaKnown RBP12.3□□□□□ -0.44
RNF220-206ENST00000453863 NUP188Q5SRE5 1749 aa12.29□□□□□ -0.44
RNF220-206ENST00000453863 EIF4A2Q14240 407 aaKnown RBP12.29□□□□□ -0.44
RNF220-206ENST00000453863 DDX54Q8TDD1 881 aaKnown RBP12.29□□□□□ -0.44
RNF220-206ENST00000453863 SPG7Q9UQ90 795 aa12.29□□□□□ -0.44
RNF220-206ENST00000453863 KAT6BQ8WYB5 2073 aa12.28□□□□□ -0.44
RNF220-206ENST00000453863 BTAF1O14981 1849 aa12.28□□□□□ -0.44
RNF220-206ENST00000453863 PER1O15534 1290 aaPredicted RBP12.28□□□□□ -0.44
RNF220-206ENST00000453863 IGSF1Q8N6C5 1336 aa12.28□□□□□ -0.44
RNF220-206ENST00000453863 NBPF14Q5TI25 921 aa12.27□□□□□ -0.45
RNF220-206ENST00000453863 EYA1Q99502 592 aa12.27□□□□□ -0.45
RNF220-206ENST00000453863 PLSCR1O15162 318 aa12.26□□□□□ -0.45
RNF220-206ENST00000453863 EZH2Q15910 746 aaKnown RBP12.26□□□□□ -0.45
RNF220-206ENST00000453863 CFAP53Q96M91 514 aa12.26□□□□□ -0.45
RNF220-206ENST00000453863 CAMKK2Q96RR4 588 aa12.26□□□□□ -0.45
RNF220-206ENST00000453863 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.26□□□□□ -0.45
RNF220-206ENST00000453863 SYTL4Q96C24 671 aaPredicted RBP12.25□□□□□ -0.45
RNF220-206ENST00000453863 ACSBG1Q96GR2 724 aa12.25□□□□□ -0.45
RNF220-206ENST00000453863 HMGB2P26583 209 aaKnown RBP12.24□□□□□ -0.45
RNF220-206ENST00000453863 MTHFSP49914 203 aa12.24□□□□□ -0.45
RNF220-206ENST00000453863 CNGB1Q14028 1251 aaPredicted RBP12.24□□□□□ -0.45
RNF220-206ENST00000453863 KDRP35968 1356 aa12.23□□□□□ -0.45
RNF220-206ENST00000453863 DIAPH1O60610 1272 aaKnown RBP12.23□□□□□ -0.45
RNF220-206ENST00000453863 AMOTQ4VCS5 1084 aa12.23□□□□□ -0.45
RNF220-206ENST00000453863 HSP90AB1P08238 724 aaKnown RBP12.22□□□□□ -0.45
RNF220-206ENST00000453863 PLEKHO1Q53GL0 409 aaPredicted RBP12.22□□□□□ -0.45
RNF220-206ENST00000453863 IFNL2Q8IZJ0 200 aa12.22□□□□□ -0.45
RNF220-206ENST00000453863 TOGARAM1Q9Y4F4 1720 aa12.21□□□□□ -0.45
RNF220-206ENST00000453863 KCNQ2O43526 872 aa12.21□□□□□ -0.45
RNF220-206ENST00000453863 C1orf141Q5JVX7 400 aa12.21□□□□□ -0.45
RNF220-206ENST00000453863 LRP5O75197 1615 aa12.21□□□□□ -0.46
RNF220-206ENST00000453863 COL3A1P02461 1466 aaPredicted RBP12.21□□□□□ -0.46
RNF220-206ENST00000453863 CYP27B1O15528 508 aa12.2□□□□□ -0.46
RNF220-206ENST00000453863 IL13P35225 146 aa12.2□□□□□ -0.46
RNF220-206ENST00000453863 PRIM1P49642 420 aaKnown RBP12.2□□□□□ -0.46
RNF220-206ENST00000453863 TXNRD1Q16881 649 aa12.2□□□□□ -0.46
RNF220-206ENST00000453863 SULT6B1Q6IMI4 303 aa12.2□□□□□ -0.46
RNF220-206ENST00000453863 ZNF530Q6P9A1 599 aaPredicted RBP12.2□□□□□ -0.46
RNF220-206ENST00000453863 NUDCQ9Y266 331 aa12.2□□□□□ -0.46
RNF220-206ENST00000453863 ITGB4P16144 1822 aa12.2□□□□□ -0.46
RNF220-206ENST00000453863 LY75O60449 1722 aa12.2□□□□□ -0.46
RNF220-206ENST00000453863 PSDA5PKW4 1024 aaPredicted RBP12.19□□□□□ -0.46
RNF220-206ENST00000453863 R3HDM1Q15032 1099 aaKnown RBP12.19□□□□□ -0.46
RNF220-206ENST00000453863 SLC27A3Q5K4L6 730 aa12.19□□□□□ -0.46
RNF220-206ENST00000453863 STK32BQ9NY57 414 aa12.19□□□□□ -0.46
RNF220-206ENST00000453863 PAPPAQ13219 1627 aa12.19□□□□□ -0.46
RNF220-206ENST00000453863 U2SURPO15042 1029 aaKnown RBP12.18□□□□□ -0.46
RNF220-206ENST00000453863 PHKG2P15735 406 aa12.18□□□□□ -0.46
RNF220-206ENST00000453863 NKX1-1Q15270 411 aaPredicted RBP12.18□□□□□ -0.46
RNF220-206ENST00000453863 PTF1AQ7RTS3 328 aa12.18□□□□□ -0.46
RNF220-206ENST00000453863 SMARCC1Q92922 1105 aaPredicted RBP12.18□□□□□ -0.46
RNF220-206ENST00000453863 TMOD3Q9NYL9 352 aa12.18□□□□□ -0.46
RNF220-206ENST00000453863 PPP2R1AP30153 589 aa12.17□□□□□ -0.46
RNF220-206ENST00000453863 AEBP1Q8IUX7 1158 aa12.17□□□□□ -0.46
RNF220-206ENST00000453863 DCAF5Q96JK2 942 aa12.17□□□□□ -0.46
RNF220-206ENST00000453863 PALLDQ8WX93 1383 aa12.17□□□□□ -0.46
RNF220-206ENST00000453863 RALBP1Q15311 655 aa12.16□□□□□ -0.46
RNF220-206ENST00000453863 MPRIPQ6WCQ1 1025 aa12.16□□□□□ -0.46
RNF220-206ENST00000453863 C5P01031 1676 aa12.16□□□□□ -0.46
RNF220-206ENST00000453863 QSER1Q2KHR3 1735 aa12.15□□□□□ -0.46
RNF220-206ENST00000453863 NEFMP07197 916 aa12.15□□□□□ -0.46
RNF220-206ENST00000453863 HMOX1P09601 288 aa12.15□□□□□ -0.46
RNF220-206ENST00000453863 DDX10Q13206 875 aaKnown RBP12.15□□□□□ -0.46
RNF220-206ENST00000453863 CCNL1Q9UK58 526 aaPredicted RBP12.15□□□□□ -0.46
RNF220-206ENST00000453863 SCN11AQ9UI33 1791 aa12.15□□□□□ -0.46
RNF220-206ENST00000453863 ERVV-2B6SEH9 535 aa12.14□□□□□ -0.47
RNF220-206ENST00000453863 CASZ1Q86V15 1759 aa12.14□□□□□ -0.47
RNF220-206ENST00000453863 SLC15A2Q16348 729 aa12.13□□□□□ -0.47
RNF220-206ENST00000453863 AKAP4Q5JQC9 854 aa12.13□□□□□ -0.47
RNF220-206ENST00000453863 GAS2L2Q8NHY3 880 aa12.13□□□□□ -0.47
RNF220-206ENST00000453863 ANO8Q9HCE9 1232 aaPredicted RBP12.13□□□□□ -0.47
RNF220-206ENST00000453863 KDM6AO15550 1401 aaPredicted RBP12.12□□□□□ -0.47
RNF220-206ENST00000453863 VIRMAQ69YN4 1812 aaKnown RBP12.12□□□□□ -0.47
RNF220-206ENST00000453863 U2AF1L5P0DN76 240 aaPredicted RBP12.12□□□□□ -0.47
RNF220-206ENST00000453863 CABP4P57796 275 aa12.12□□□□□ -0.47
RNF220-206ENST00000453863 U2AF1Q01081 240 aaKnown RBP eCLIP12.12□□□□□ -0.47
RNF220-206ENST00000453863 PROM2Q8N271 834 aa12.12□□□□□ -0.47
RNF220-206ENST00000453863 MRC1P22897 1456 aa12.12□□□□□ -0.47
RNF220-206ENST00000453863 MYBBP1AQ9BQG0 1328 aaKnown RBP12.11□□□□□ -0.47
RNF220-206ENST00000453863 TAF1LQ8IZX4 1826 aa12.11□□□□□ -0.47
RNF220-206ENST00000453863 ZNF831Q5JPB2 1677 aa12.11□□□□□ -0.47
RNF220-206ENST00000453863 MAP3K5Q99683 1374 aa12.11□□□□□ -0.47
RNF220-206ENST00000453863 PIGBQ92521 554 aa12.11□□□□□ -0.47
RNF220-206ENST00000453863 SPON1Q9HCB6 807 aa12.11□□□□□ -0.47
RNF220-206ENST00000453863 ADAMTS7Q9UKP4 1686 aa12.1□□□□□ -0.47
RNF220-206ENST00000453863 PNNQ9H307 717 aaKnown RBP12.1□□□□□ -0.47
RNF220-206ENST00000453863 TFCP2L1Q9NZI6 479 aa12.1□□□□□ -0.47
RNF220-206ENST00000453863 C4BP0C0L5 1744 aa12.1□□□□□ -0.47
RNF220-206ENST00000453863 FCHSD2O94868 740 aa12.09□□□□□ -0.47
RNF220-206ENST00000453863 PRKAR2BP31323 418 aa12.09□□□□□ -0.47
RNF220-206ENST00000453863 LRRC4BQ9NT99 713 aa12.09□□□□□ -0.47
RNF220-206ENST00000453863 PPP1R1BQ9UD71 204 aaPredicted RBP12.09□□□□□ -0.47
RNF220-206ENST00000453863 TUBGCP6Q96RT7 1819 aa12.09□□□□□ -0.47
RNF220-206ENST00000453863 LOC102724428A0A0B4J2F2 783 aa12.08□□□□□ -0.48
RNF220-206ENST00000453863 SIK1P57059 783 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms