RNA–Protein interactions for RNA: ENST00000453466.1

PMPCB-205, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,509 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-205ENST00000453466 DDX54Q8TDD1 881 aaKnown RBP26.88■■□□□ 1.89
PMPCB-205ENST00000453466 CFAP53Q96M91 514 aa26.88■■□□□ 1.89
PMPCB-205ENST00000453466 MEGF6O75095 1541 aa26.86■■□□□ 1.89
PMPCB-205ENST00000453466 TRIM37O94972 964 aa26.86■■□□□ 1.89
PMPCB-205ENST00000453466 NCAPD2Q15021 1401 aa26.86■■□□□ 1.89
PMPCB-205ENST00000453466 PARD3Q8TEW0 1356 aa26.86■■□□□ 1.89
PMPCB-205ENST00000453466 SPG7Q9UQ90 795 aa26.83■■□□□ 1.89
PMPCB-205ENST00000453466 BCL9O00512 1426 aa26.83■■□□□ 1.88
PMPCB-205ENST00000453466 SULT6B1Q6IMI4 303 aa26.82■■□□□ 1.88
PMPCB-205ENST00000453466 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.82■■□□□ 1.884e-7■■□□□ 12.3
PMPCB-205ENST00000453466 BAG6P46379 1132 aa26.8■■□□□ 1.88
PMPCB-205ENST00000453466 PCDH11XQ9BZA7 1347 aa26.79■■□□□ 1.88
PMPCB-205ENST00000453466 PCDH11YQ9BZA8 1340 aa26.79■■□□□ 1.88
PMPCB-205ENST00000453466 AEBP1Q8IUX7 1158 aa26.79■■□□□ 1.88
PMPCB-205ENST00000453466 NUDCQ9Y266 331 aa26.79■■□□□ 1.88
PMPCB-205ENST00000453466 APBA3O96018 575 aa26.78■■□□□ 1.88
PMPCB-205ENST00000453466 BCL11BQ9C0K0 894 aaPredicted RBP26.78■■□□□ 1.88
PMPCB-205ENST00000453466 U2SURPO15042 1029 aaKnown RBP26.77■■□□□ 1.88
PMPCB-205ENST00000453466 PLEKHG2Q9H7P9 1386 aa26.77■■□□□ 1.88
PMPCB-205ENST00000453466 MYBBP1AQ9BQG0 1328 aaKnown RBP26.77■■□□□ 1.88
PMPCB-205ENST00000453466 PLEKHO1Q53GL0 409 aaPredicted RBP26.76■■□□□ 1.87
PMPCB-205ENST00000453466 DEFB132Q7Z7B7 95 aa26.76■■□□□ 1.87
PMPCB-205ENST00000453466 KDRP35968 1356 aa26.75■■□□□ 1.87
PMPCB-205ENST00000453466 HMOX1P09601 288 aa26.75■■□□□ 1.87
PMPCB-205ENST00000453466 AMOTQ4VCS5 1084 aa26.75■■□□□ 1.87
PMPCB-205ENST00000453466 ACSBG1Q96GR2 724 aa26.75■■□□□ 1.87
PMPCB-205ENST00000453466 COL3A1P02461 1466 aaPredicted RBP26.74■■□□□ 1.87
PMPCB-205ENST00000453466 CYP27B1O15528 508 aa26.74■■□□□ 1.87
PMPCB-205ENST00000453466 IFNL2Q8IZJ0 200 aa26.72■■□□□ 1.87
PMPCB-205ENST00000453466 KCNQ2O43526 872 aa26.71■■□□□ 1.87
PMPCB-205ENST00000453466 EN1Q05925 392 aaPredicted RBP26.71■■□□□ 1.87
PMPCB-205ENST00000453466 RGPD1P0DJD0 1748 aa26.71■■□□□ 1.87
PMPCB-205ENST00000453466 PTF1AQ7RTS3 328 aa26.7■■□□□ 1.86
PMPCB-205ENST00000453466 U2AF1L5P0DN76 240 aaPredicted RBP26.68■■□□□ 1.86
PMPCB-205ENST00000453466 PHKG2P15735 406 aa26.68■■□□□ 1.86
PMPCB-205ENST00000453466 PRIM1P49642 420 aaKnown RBP26.68■■□□□ 1.86
PMPCB-205ENST00000453466 U2AF1Q01081 240 aaKnown RBP eCLIP26.68■■□□□ 1.86
PMPCB-205ENST00000453466 NKX1-1Q15270 411 aaPredicted RBP26.68■■□□□ 1.86
PMPCB-205ENST00000453466 SYTL4Q96C24 671 aaPredicted RBP26.68■■□□□ 1.86
PMPCB-205ENST00000453466 CCDC184Q52MB2 194 aa26.67■■□□□ 1.86
PMPCB-205ENST00000453466 ZNF530Q6P9A1 599 aaPredicted RBP26.67■■□□□ 1.86
PMPCB-205ENST00000453466 MRS2Q9HD23 443 aa26.67■■□□□ 1.86
PMPCB-205ENST00000453466 PLSCR1O15162 318 aa26.66■■□□□ 1.86
PMPCB-205ENST00000453466 CAMKK2Q96RR4 588 aa26.66■■□□□ 1.86
PMPCB-205ENST00000453466 C1orf141Q5JVX7 400 aa26.65■■□□□ 1.86
PMPCB-205ENST00000453466 PKD1L3Q7Z443 1732 aa26.65■■□□□ 1.86
PMPCB-205ENST00000453466 HSP90AB1P08238 724 aaKnown RBP26.65■■□□□ 1.86
PMPCB-205ENST00000453466 EZH2Q15910 746 aaKnown RBP26.65■■□□□ 1.86
PMPCB-205ENST00000453466 SHANK3Q9BYB0 1731 aa26.63■■□□□ 1.85
PMPCB-205ENST00000453466 SBF2Q86WG5 1849 aa26.63■■□□□ 1.85
PMPCB-205ENST00000453466 FCHSD2O94868 740 aa26.63■■□□□ 1.85
PMPCB-205ENST00000453466 TNS1Q9HBL0 1735 aaKnown RBP26.62■■□□□ 1.85
PMPCB-205ENST00000453466 DCAF5Q96JK2 942 aa26.6■■□□□ 1.85
PMPCB-205ENST00000453466 RSPH6AQ9H0K4 717 aa26.6■■□□□ 1.85
PMPCB-205ENST00000453466 PRKAR2BP31323 418 aa26.6■■□□□ 1.85
PMPCB-205ENST00000453466 KAT6BQ8WYB5 2073 aa26.59■■□□□ 1.85
PMPCB-205ENST00000453466 MTHFSDQ2M296 383 aaKnown RBP26.59■■□□□ 1.85
PMPCB-205ENST00000453466 AKAP4Q5JQC9 854 aa26.59■■□□□ 1.85
PMPCB-205ENST00000453466 NHSQ6T4R5 1651 aa26.58■■□□□ 1.85
PMPCB-205ENST00000453466 MPRIPQ6WCQ1 1025 aa26.58■■□□□ 1.85
PMPCB-205ENST00000453466 ERVV-2B6SEH9 535 aa26.56■■□□□ 1.84
PMPCB-205ENST00000453466 GAS2L2Q8NHY3 880 aa26.56■■□□□ 1.84
PMPCB-205ENST00000453466 PNISRQ8TF01 805 aaKnown RBP26.55■■□□□ 1.84
PMPCB-205ENST00000453466 PNNQ9H307 717 aaKnown RBP26.55■■□□□ 1.84
PMPCB-205ENST00000453466 TMOD3Q9NYL9 352 aa26.55■■□□□ 1.84
PMPCB-205ENST00000453466 NEFMP07197 916 aa26.55■■□□□ 1.84
PMPCB-205ENST00000453466 TXNRD1Q16881 649 aa26.54■■□□□ 1.84
PMPCB-205ENST00000453466 PHACTR3Q96KR7 559 aa26.54■■□□□ 1.84
PMPCB-205ENST00000453466 PROM2Q8N271 834 aa26.53■■□□□ 1.84
PMPCB-205ENST00000453466 PIGBQ92521 554 aa26.53■■□□□ 1.84
PMPCB-205ENST00000453466 DOT1LQ8TEK3 1739 aa26.52■■□□□ 1.84
PMPCB-205ENST00000453466 CABP4P57796 275 aa26.51■■□□□ 1.83
PMPCB-205ENST00000453466 WDR43Q15061 677 aaKnown RBP eCLIP26.5■■□□□ 1.83
PMPCB-205ENST00000453466 NBPF14Q5TI25 921 aa26.5■■□□□ 1.83
PMPCB-205ENST00000453466 YTHDC1Q96MU7 727 aaKnown RBP26.5■■□□□ 1.83
PMPCB-205ENST00000453466 SMARCC1Q92922 1105 aaPredicted RBP26.49■■□□□ 1.83
PMPCB-205ENST00000453466 GNAT3A8MTJ3 354 aa26.49■■□□□ 1.83
PMPCB-205ENST00000453466 KDM6AO15550 1401 aaPredicted RBP26.48■■□□□ 1.83
PMPCB-205ENST00000453466 SLC27A3Q5K4L6 730 aa26.48■■□□□ 1.83
PMPCB-205ENST00000453466 BTAF1O14981 1849 aa26.48■■□□□ 1.83
PMPCB-205ENST00000453466 RNMTO43148 476 aaKnown RBP26.47■■□□□ 1.83
PMPCB-205ENST00000453466 LGR6Q9HBX8 967 aa26.47■■□□□ 1.83
PMPCB-205ENST00000453466 FAM9BQ8IZU0 186 aa26.46■■□□□ 1.83
PMPCB-205ENST00000453466 NFATC2IPQ8NCF5 419 aa26.45■■□□□ 1.83
PMPCB-205ENST00000453466 PLEKHF1Q96S99 279 aa26.45■■□□□ 1.83
PMPCB-205ENST00000453466 MAP3K5Q99683 1374 aa26.45■■□□□ 1.83
PMPCB-205ENST00000453466 RGPD3A6NKT7 1758 aaPredicted RBP26.45■■□□□ 1.82
PMPCB-205ENST00000453466 RGPD4Q7Z3J3 1758 aa26.45■■□□□ 1.82
PMPCB-205ENST00000453466 MAPK8IP3Q9UPT6 1336 aa26.44■■□□□ 1.82
PMPCB-205ENST00000453466 TOGARAM1Q9Y4F4 1720 aa26.43■■□□□ 1.82
PMPCB-205ENST00000453466 PALLDQ8WX93 1383 aa26.43■■□□□ 1.82
PMPCB-205ENST00000453466 HMGB2P26583 209 aaKnown RBP26.43■■□□□ 1.82
PMPCB-205ENST00000453466 SLC52A2Q9HAB3 445 aa26.43■■□□□ 1.82
PMPCB-205ENST00000453466 CCNL1Q9UK58 526 aaPredicted RBP26.43■■□□□ 1.82
PMPCB-205ENST00000453466 ASAP1Q9ULH1 1129 aa26.43■■□□□ 1.82
PMPCB-205ENST00000453466 RTF1Q92541 710 aaKnown RBP26.42■■□□□ 1.82
PMPCB-205ENST00000453466 LRRC4BQ9NT99 713 aa26.42■■□□□ 1.82
PMPCB-205ENST00000453466 ADAMTS8Q9UP79 889 aa26.42■■□□□ 1.82
PMPCB-205ENST00000453466 ATG3Q9NT62 314 aa26.41■■□□□ 1.82
PMPCB-205ENST00000453466 IL17REQ8NFR9 667 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms