RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 BCL9O00512 1426 aa13.33□□□□□ -0.28
USP54-207ENST00000451492 NBPF14Q5TI25 921 aa13.32□□□□□ -0.28
USP54-207ENST00000451492 TOGARAM1Q9Y4F4 1720 aa13.32□□□□□ -0.28
USP54-207ENST00000451492 CASZ1Q86V15 1759 aa13.31□□□□□ -0.28
USP54-207ENST00000451492 RAPGEF4Q8WZA2 1011 aa13.31□□□□□ -0.28
USP54-207ENST00000451492 SYTL4Q96C24 671 aaPredicted RBP13.31□□□□□ -0.28
USP54-207ENST00000451492 ITGB4P16144 1822 aa13.31□□□□□ -0.28
USP54-207ENST00000451492 KIF7Q2M1P5 1343 aa13.31□□□□□ -0.28
USP54-207ENST00000451492 TUBGCP6Q96RT7 1819 aa13.3□□□□□ -0.28
USP54-207ENST00000451492 TATP17735 454 aaPredicted RBP13.3□□□□□ -0.28
USP54-207ENST00000451492 ANO8Q9HCE9 1232 aaPredicted RBP13.3□□□□□ -0.28
USP54-207ENST00000451492 KIF24Q5T7B8 1368 aa13.3□□□□□ -0.28
USP54-207ENST00000451492 PAPPAQ13219 1627 aa13.29□□□□□ -0.28
USP54-207ENST00000451492 PLSCR1O15162 318 aa13.29□□□□□ -0.28
USP54-207ENST00000451492 CNGB1Q14028 1251 aaPredicted RBP13.29□□□□□ -0.28
USP54-207ENST00000451492 ZCRB1Q8TBF4 217 aaKnown RBP13.29□□□□□ -0.28
USP54-207ENST00000451492 LY75O60449 1722 aa13.29□□□□□ -0.28
USP54-207ENST00000451492 TXNRD1Q16881 649 aa13.28□□□□□ -0.28
USP54-207ENST00000451492 MORC1Q86VD1 984 aa13.27□□□□□ -0.29
USP54-207ENST00000451492 PROM2Q8N271 834 aa13.27□□□□□ -0.29
USP54-207ENST00000451492 POLKQ9UBT6 870 aa13.27□□□□□ -0.29
USP54-207ENST00000451492 KNSTRNQ9Y448 316 aa13.27□□□□□ -0.29
USP54-207ENST00000451492 NSD2O96028 1365 aa13.27□□□□□ -0.29
USP54-207ENST00000451492 WASHC2AQ641Q2 1341 aa13.26□□□□□ -0.29
USP54-207ENST00000451492 PCDH11XQ9BZA7 1347 aa13.25□□□□□ -0.29
USP54-207ENST00000451492 PCDH11YQ9BZA8 1340 aa13.25□□□□□ -0.29
USP54-207ENST00000451492 STK32BQ9NY57 414 aa13.25□□□□□ -0.29
USP54-207ENST00000451492 C5P01031 1676 aa13.24□□□□□ -0.29
USP54-207ENST00000451492 PRIM1P49642 420 aaKnown RBP13.24□□□□□ -0.29
USP54-207ENST00000451492 EIF4A2Q14240 407 aaKnown RBP13.24□□□□□ -0.29
USP54-207ENST00000451492 EYA1Q99502 592 aa13.24□□□□□ -0.29
USP54-207ENST00000451492 VIRMAQ69YN4 1812 aaKnown RBP13.24□□□□□ -0.29
USP54-207ENST00000451492 TAF1LQ8IZX4 1826 aa13.24□□□□□ -0.29
USP54-207ENST00000451492 NCAPD2Q15021 1401 aa13.23□□□□□ -0.29
USP54-207ENST00000451492 QSER1Q2KHR3 1735 aa13.23□□□□□ -0.29
USP54-207ENST00000451492 KCNQ4P56696 695 aa13.23□□□□□ -0.29
USP54-207ENST00000451492 PDGFDQ9GZP0 370 aaPredicted RBP13.23□□□□□ -0.29
USP54-207ENST00000451492 CC2D1BQ5T0F9 858 aaKnown RBP13.22□□□□□ -0.29
USP54-207ENST00000451492 CYP27B1O15528 508 aa13.21□□□□□ -0.29
USP54-207ENST00000451492 ZBTB7AO95365 584 aa13.21□□□□□ -0.29
USP54-207ENST00000451492 SLC15A2Q16348 729 aa13.21□□□□□ -0.29
USP54-207ENST00000451492 LRRC4BQ9NT99 713 aa13.21□□□□□ -0.29
USP54-207ENST00000451492 PPP1R1BQ9UD71 204 aaPredicted RBP13.21□□□□□ -0.29
USP54-207ENST00000451492 ZNF827Q17R98 1081 aa13.2□□□□□ -0.3
USP54-207ENST00000451492 AMER1Q5JTC6 1135 aaPredicted RBP13.2□□□□□ -0.3
USP54-207ENST00000451492 MPRIPQ6WCQ1 1025 aa13.19□□□□□ -0.3
USP54-207ENST00000451492 SPON1Q9HCB6 807 aa13.19□□□□□ -0.3
USP54-207ENST00000451492 SPG7Q9UQ90 795 aa13.19□□□□□ -0.3
USP54-207ENST00000451492 IGSF1Q8N6C5 1336 aa13.18□□□□□ -0.3
USP54-207ENST00000451492 CCNL1Q9UK58 526 aaPredicted RBP13.18□□□□□ -0.3
USP54-207ENST00000451492 ATF5Q9Y2D1 282 aaPredicted RBP13.18□□□□□ -0.3
USP54-207ENST00000451492 AEBP1Q8IUX7 1158 aa13.17□□□□□ -0.3
USP54-207ENST00000451492 C4BP0C0L5 1744 aa13.16□□□□□ -0.3
USP54-207ENST00000451492 PALLDQ8WX93 1383 aa13.16□□□□□ -0.3
USP54-207ENST00000451492 SCN11AQ9UI33 1791 aa13.15□□□□□ -0.3
USP54-207ENST00000451492 PHKG2P15735 406 aa13.15□□□□□ -0.3
USP54-207ENST00000451492 SLC27A3Q5K4L6 730 aa13.15□□□□□ -0.3
USP54-207ENST00000451492 PER1O15534 1290 aaPredicted RBP13.14□□□□□ -0.31
USP54-207ENST00000451492 MTHFSP49914 203 aa13.14□□□□□ -0.31
USP54-207ENST00000451492 SULT6B1Q6IMI4 303 aa13.14□□□□□ -0.31
USP54-207ENST00000451492 ZNF530Q6P9A1 599 aaPredicted RBP13.14□□□□□ -0.31
USP54-207ENST00000451492 IFNL2Q8IZJ0 200 aa13.14□□□□□ -0.31
USP54-207ENST00000451492 TFCP2L1Q9NZI6 479 aa13.14□□□□□ -0.31
USP54-207ENST00000451492 UBR3Q6ZT12 1888 aa13.14□□□□□ -0.31
USP54-207ENST00000451492 MSH5O43196 834 aa13.13□□□□□ -0.31
USP54-207ENST00000451492 AKT1S1Q96B36 256 aa13.13□□□□□ -0.31
USP54-207ENST00000451492 TMOD3Q9NYL9 352 aa13.13□□□□□ -0.31
USP54-207ENST00000451492 PNPLA7Q6ZV29 1317 aa13.13□□□□□ -0.31
USP54-207ENST00000451492 HMOX1P09601 288 aa13.12□□□□□ -0.31
USP54-207ENST00000451492 IL13P35225 146 aa13.12□□□□□ -0.31
USP54-207ENST00000451492 PIGBQ92521 554 aa13.12□□□□□ -0.31
USP54-207ENST00000451492 KDM6AO15550 1401 aaPredicted RBP13.12□□□□□ -0.31
USP54-207ENST00000451492 COL24A1Q17RW2 1714 aa13.11□□□□□ -0.31
USP54-207ENST00000451492 NKX1-1Q15270 411 aaPredicted RBP13.11□□□□□ -0.31
USP54-207ENST00000451492 PLEKHO1Q53GL0 409 aaPredicted RBP13.11□□□□□ -0.31
USP54-207ENST00000451492 KLHL34Q8N239 644 aa13.11□□□□□ -0.31
USP54-207ENST00000451492 MTFR1LQ9H019 292 aa13.11□□□□□ -0.31
USP54-207ENST00000451492 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.11□□□□□ -0.31
USP54-207ENST00000451492 COL5A3P25940 1745 aaPredicted RBP13.1□□□□□ -0.31
USP54-207ENST00000451492 COL3A1P02461 1466 aaPredicted RBP13.1□□□□□ -0.31
USP54-207ENST00000451492 PTGER2P43116 358 aa13.1□□□□□ -0.31
USP54-207ENST00000451492 C1orf141Q5JVX7 400 aa13.1□□□□□ -0.31
USP54-207ENST00000451492 KDRP35968 1356 aa13.09□□□□□ -0.31
USP54-207ENST00000451492 DIAPH1O60610 1272 aaKnown RBP13.09□□□□□ -0.31
USP54-207ENST00000451492 SMARCC1Q92922 1105 aaPredicted RBP13.09□□□□□ -0.31
USP54-207ENST00000451492 ASAP1Q9ULH1 1129 aa13.09□□□□□ -0.31
USP54-207ENST00000451492 U2SURPO15042 1029 aaKnown RBP13.08□□□□□ -0.32
USP54-207ENST00000451492 PHF14O94880 888 aa13.08□□□□□ -0.32
USP54-207ENST00000451492 AMOTQ4VCS5 1084 aa13.08□□□□□ -0.32
USP54-207ENST00000451492 MSL1Q68DK7 614 aa13.08□□□□□ -0.32
USP54-207ENST00000451492 SMIM5Q71RC9 77 aa13.08□□□□□ -0.32
USP54-207ENST00000451492 AK7Q96M32 723 aa13.08□□□□□ -0.32
USP54-207ENST00000451492 TJP1Q07157 1748 aa13.08□□□□□ -0.32
USP54-207ENST00000451492 PLEKHG2Q9H7P9 1386 aa13.07□□□□□ -0.32
USP54-207ENST00000451492 NPC1L1Q9UHC9 1359 aa13.07□□□□□ -0.32
USP54-207ENST00000451492 HSP90AB1P08238 724 aaKnown RBP13.07□□□□□ -0.32
USP54-207ENST00000451492 DCAF5Q96JK2 942 aa13.07□□□□□ -0.32
USP54-207ENST00000451492 RBM42Q9BTD8 480 aaKnown RBP13.07□□□□□ -0.32
USP54-207ENST00000451492 FHDC1Q9C0D6 1143 aaPredicted RBP13.07□□□□□ -0.32
USP54-207ENST00000451492 LOC102724428A0A0B4J2F2 783 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 164.3 ms