RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 KIAA2012Q0VF49 1180 aa21■□□□□ 0.95
SCUBE2-202ENST00000450649 VAMP4O75379 141 aa21■□□□□ 0.95
SCUBE2-202ENST00000450649 INTS3Q68E01 1043 aaKnown RBP21■□□□□ 0.95
SCUBE2-202ENST00000450649 POLKQ9UBT6 870 aa21■□□□□ 0.95
SCUBE2-202ENST00000450649 NFE2L2Q16236 605 aa20.99■□□□□ 0.95
SCUBE2-202ENST00000450649 FOXD4L5Q5VV16 416 aaPredicted RBP20.99■□□□□ 0.95
SCUBE2-202ENST00000450649 MYRIPQ8NFW9 859 aa20.99■□□□□ 0.95
SCUBE2-202ENST00000450649 FOXD4L4Q8WXT5 416 aaPredicted RBP20.99■□□□□ 0.95
SCUBE2-202ENST00000450649 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.99■□□□□ 0.95
SCUBE2-202ENST00000450649 PREX1Q8TCU6 1659 aa20.98■□□□□ 0.95
SCUBE2-202ENST00000450649 ZBTB7CA1YPR0 619 aa20.98■□□□□ 0.95
SCUBE2-202ENST00000450649 MBD3O95983 291 aa20.98■□□□□ 0.95
SCUBE2-202ENST00000450649 C16orf71Q8IYS4 520 aaPredicted RBP20.98■□□□□ 0.95
SCUBE2-202ENST00000450649 ABCC4O15439 1325 aa20.98■□□□□ 0.95
SCUBE2-202ENST00000450649 DNTTIP2Q5QJE6 756 aaKnown RBP20.98■□□□□ 0.95
SCUBE2-202ENST00000450649 DMTNQ08495 405 aa20.97■□□□□ 0.95
SCUBE2-202ENST00000450649 TSPYL6Q8N831 410 aa20.97■□□□□ 0.95
SCUBE2-202ENST00000450649 JARID2Q92833 1246 aaPredicted RBP20.97■□□□□ 0.95
SCUBE2-202ENST00000450649 ALKQ9UM73 1620 aa20.97■□□□□ 0.95
SCUBE2-202ENST00000450649 GNAI1P63096 354 aa20.96■□□□□ 0.95
SCUBE2-202ENST00000450649 UTP14CQ5TAP6 766 aaKnown RBP20.96■□□□□ 0.95
SCUBE2-202ENST00000450649 PHACTR3Q96KR7 559 aa20.96■□□□□ 0.95
SCUBE2-202ENST00000450649 IFT57Q9NWB7 429 aa20.96■□□□□ 0.95
SCUBE2-202ENST00000450649 TSPY26PQ9H489 355 aa20.95■□□□□ 0.94
SCUBE2-202ENST00000450649 ATP7BP35670 1465 aa20.95■□□□□ 0.94
SCUBE2-202ENST00000450649 ELL2O00472 640 aaPredicted RBP20.95■□□□□ 0.94
SCUBE2-202ENST00000450649 ZSCAN20P17040 1043 aaPredicted RBP20.95■□□□□ 0.94
SCUBE2-202ENST00000450649 DCTPP1Q9H773 170 aa20.95■□□□□ 0.94
SCUBE2-202ENST00000450649 ZNF853P0CG23 659 aa20.94■□□□□ 0.94
SCUBE2-202ENST00000450649 TSC1Q92574 1164 aa20.94■□□□□ 0.94
SCUBE2-202ENST00000450649 SDSP20132 328 aa20.94■□□□□ 0.94
SCUBE2-202ENST00000450649 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.93■□□□□ 0.94
SCUBE2-202ENST00000450649 OTUD7AQ8TE49 926 aaPredicted RBP20.93■□□□□ 0.94
SCUBE2-202ENST00000450649 THUMPD2Q9BTF0 503 aaKnown RBP20.93■□□□□ 0.94
SCUBE2-202ENST00000450649 RICTORQ6R327 1708 aa20.93■□□□□ 0.94
SCUBE2-202ENST00000450649 CASC1Q6TDU7 716 aa20.93■□□□□ 0.94
SCUBE2-202ENST00000450649 YEATS2Q9ULM3 1422 aa20.92■□□□□ 0.94
SCUBE2-202ENST00000450649 ZNF710Q8N1W2 664 aa20.92■□□□□ 0.94
SCUBE2-202ENST00000450649 PLEKHG5O94827 1062 aa20.92■□□□□ 0.94
SCUBE2-202ENST00000450649 HMOX1P09601 288 aa20.92■□□□□ 0.94
SCUBE2-202ENST00000450649 FBLN1P23142 703 aa20.92■□□□□ 0.94
SCUBE2-202ENST00000450649 PRIMPOLQ96LW4 560 aa20.91■□□□□ 0.94
SCUBE2-202ENST00000450649 MPNDQ8N594 471 aa20.91■□□□□ 0.94
SCUBE2-202ENST00000450649 MBIPQ9NS73 344 aa20.91■□□□□ 0.94
SCUBE2-202ENST00000450649 DLC1Q96QB1 1528 aa20.9■□□□□ 0.94
SCUBE2-202ENST00000450649 A0A0U1RQG5 324 aaPredicted RBP20.9■□□□□ 0.94
SCUBE2-202ENST00000450649 IL13P35225 146 aa20.9■□□□□ 0.94
SCUBE2-202ENST00000450649 REC8O95072 547 aa20.9■□□□□ 0.94
SCUBE2-202ENST00000450649 ZNF830Q96NB3 372 aaPredicted RBP20.9■□□□□ 0.94
SCUBE2-202ENST00000450649 PIBF1Q8WXW3 757 aa20.89■□□□□ 0.94
SCUBE2-202ENST00000450649 HMGN5P82970 282 aaKnown RBP20.89■□□□□ 0.93
SCUBE2-202ENST00000450649 TWISTNBQ3B726 338 aaPredicted RBP20.89■□□□□ 0.93
SCUBE2-202ENST00000450649 API5Q9BZZ5 524 aaKnown RBP20.89■□□□□ 0.93
SCUBE2-202ENST00000450649 KNDC1Q76NI1 1749 aa20.88■□□□□ 0.93
SCUBE2-202ENST00000450649 BRD1O95696 1058 aa20.88■□□□□ 0.93
SCUBE2-202ENST00000450649 NOLC1Q14978 699 aaKnown RBP eCLIP20.88■□□□□ 0.93
SCUBE2-202ENST00000450649 SYAP1Q96A49 352 aaPredicted RBP20.88■□□□□ 0.93
SCUBE2-202ENST00000450649 TMX3Q96JJ7 454 aa20.88■□□□□ 0.93
SCUBE2-202ENST00000450649 GTF2F1P35269 517 aaKnown RBP eCLIP20.88■□□□□ 0.93
SCUBE2-202ENST00000450649 LMOD3Q0VAK6 560 aa20.88■□□□□ 0.93
SCUBE2-202ENST00000450649 KIF24Q5T7B8 1368 aa20.88■□□□□ 0.93
SCUBE2-202ENST00000450649 CBX1P83916 185 aa20.88■□□□□ 0.93
SCUBE2-202ENST00000450649 FBXO31Q5XUX0 539 aaPredicted RBP20.88■□□□□ 0.93
SCUBE2-202ENST00000450649 EMILIN1Q9Y6C2 1016 aa20.88■□□□□ 0.93
SCUBE2-202ENST00000450649 CDK12Q9NYV4 1490 aaPredicted RBP20.87■□□□□ 0.93
SCUBE2-202ENST00000450649 MAP2P11137 1827 aaKnown RBP20.87■□□□□ 0.93
SCUBE2-202ENST00000450649 NEK4P51957 841 aa20.87■□□□□ 0.93
SCUBE2-202ENST00000450649 EDC4Q6P2E9 1401 aaKnown RBP20.86■□□□□ 0.93
SCUBE2-202ENST00000450649 AATKQ6ZMQ8 1374 aa20.86■□□□□ 0.93
SCUBE2-202ENST00000450649 CPSF1Q10570 1443 aaKnown RBP20.86■□□□□ 0.93
SCUBE2-202ENST00000450649 ERC2O15083 957 aa20.86■□□□□ 0.93
SCUBE2-202ENST00000450649 SMARCA5O60264 1052 aaPredicted RBP20.86■□□□□ 0.93
SCUBE2-202ENST00000450649 OSCARQ8IYS5 282 aa20.86■□□□□ 0.93
SCUBE2-202ENST00000450649 APBB1O00213 710 aa20.85■□□□□ 0.93
SCUBE2-202ENST00000450649 WAPLQ7Z5K2 1190 aa20.85■□□□□ 0.93
SCUBE2-202ENST00000450649 C17orf53Q8N3J3 647 aaPredicted RBP20.84■□□□□ 0.93
SCUBE2-202ENST00000450649 ANKRD44Q8N8A2 993 aa20.84■□□□□ 0.93
SCUBE2-202ENST00000450649 C8orf58Q8NAV2 365 aa20.84■□□□□ 0.93
SCUBE2-202ENST00000450649 STAG3Q9UJ98 1225 aa20.84■□□□□ 0.93
SCUBE2-202ENST00000450649 FAM177BA6PVY3 158 aa20.84■□□□□ 0.93
SCUBE2-202ENST00000450649 PPP4R3BQ5MIZ7 849 aa20.84■□□□□ 0.93
SCUBE2-202ENST00000450649 TTC12Q9H892 705 aaPredicted RBP20.84■□□□□ 0.93
SCUBE2-202ENST00000450649 USP25Q9UHP3 1055 aa20.84■□□□□ 0.93
SCUBE2-202ENST00000450649 PHF14O94880 888 aa20.84■□□□□ 0.93
SCUBE2-202ENST00000450649 ATP2B3Q16720 1220 aa20.83■□□□□ 0.93
SCUBE2-202ENST00000450649 KIF3AQ9Y496 699 aa20.83■□□□□ 0.93
SCUBE2-202ENST00000450649 GADD45BO75293 160 aaPredicted RBP20.82■□□□□ 0.92
SCUBE2-202ENST00000450649 UVSSAQ2YD98 709 aa20.82■□□□□ 0.92
SCUBE2-202ENST00000450649 FOXD4L6Q3SYB3 417 aaPredicted RBP20.82■□□□□ 0.92
SCUBE2-202ENST00000450649 FOXD4L3Q6VB84 417 aaPredicted RBP20.82■□□□□ 0.92
SCUBE2-202ENST00000450649 GTPBP4Q9BZE4 634 aaKnown RBP20.82■□□□□ 0.92
SCUBE2-202ENST00000450649 GDPD2Q9HCC8 539 aa20.82■□□□□ 0.92
SCUBE2-202ENST00000450649 RIMS2Q9UQ26 1411 aa20.82■□□□□ 0.92
SCUBE2-202ENST00000450649 FAM184AQ8NB25 1140 aa20.82■□□□□ 0.92
SCUBE2-202ENST00000450649 CUL4AQ13619 759 aa20.81■□□□□ 0.92
SCUBE2-202ENST00000450649 ATP10DQ9P241 1426 aa20.81■□□□□ 0.92
SCUBE2-202ENST00000450649 NME9Q86XW9 330 aa20.81■□□□□ 0.92
SCUBE2-202ENST00000450649 ADCY5O95622 1261 aa20.81■□□□□ 0.92
SCUBE2-202ENST00000450649 MCM2P49736 904 aa20.8■□□□□ 0.92
SCUBE2-202ENST00000450649 FKBP5Q13451 457 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms