RNA–Protein interactions for RNA: ENST00000450297.1

SPTLC3-204, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-204ENST00000450297 COG3Q96JB2 828 aa13.61□□□□□ -0.23
SPTLC3-204ENST00000450297 SGIP1Q9BQI5 828 aa13.61□□□□□ -0.23
SPTLC3-204ENST00000450297 LRRC4BQ9NT99 713 aa13.61□□□□□ -0.23
SPTLC3-204ENST00000450297 TFCP2L1Q9NZI6 479 aa13.61□□□□□ -0.23
SPTLC3-204ENST00000450297 TONSLQ96HA7 1378 aa13.6□□□□□ -0.23
SPTLC3-204ENST00000450297 PRIM1P49642 420 aaKnown RBP13.6□□□□□ -0.23
SPTLC3-204ENST00000450297 KCNQ4P56696 695 aa13.6□□□□□ -0.23
SPTLC3-204ENST00000450297 SLC27A3Q5K4L6 730 aa13.6□□□□□ -0.23
SPTLC3-204ENST00000450297 A0A1W2PP64 1363 aa13.59□□□□□ -0.23
SPTLC3-204ENST00000450297 RBM42Q9BTD8 480 aaKnown RBP13.59□□□□□ -0.23
SPTLC3-204ENST00000450297 ZBTB12Q9Y330 459 aaPredicted RBP13.59□□□□□ -0.23
SPTLC3-204ENST00000450297 CD163L1Q9NR16 1453 aa13.59□□□□□ -0.23
SPTLC3-204ENST00000450297 SLC16A10Q8TF71 515 aa13.58□□□□□ -0.24
SPTLC3-204ENST00000450297 AKT1S1Q96B36 256 aa13.58□□□□□ -0.24
SPTLC3-204ENST00000450297 NHSQ6T4R5 1651 aa13.58□□□□□ -0.24
SPTLC3-204ENST00000450297 MON2Q7Z3U7 1717 aa13.57□□□□□ -0.24
SPTLC3-204ENST00000450297 SENP3-EIF4A1A0A087X0R7 540 aa13.57□□□□□ -0.24
SPTLC3-204ENST00000450297 HOXC9P31274 260 aa13.57□□□□□ -0.24
SPTLC3-204ENST00000450297 ZCRB1Q8TBF4 217 aaKnown RBP13.57□□□□□ -0.24
SPTLC3-204ENST00000450297 MAP3K19Q56UN5 1328 aa13.57□□□□□ -0.24
SPTLC3-204ENST00000450297 ST20-MTHFSA0A0A6YYL1 179 aa13.56□□□□□ -0.24
SPTLC3-204ENST00000450297 FBLN1P23142 703 aa13.56□□□□□ -0.24
SPTLC3-204ENST00000450297 PUS7Q96PZ0 661 aaKnown RBP13.56□□□□□ -0.24
SPTLC3-204ENST00000450297 CCNL1Q9UK58 526 aaPredicted RBP13.56□□□□□ -0.24
SPTLC3-204ENST00000450297 PNPLA7Q6ZV29 1317 aa13.55□□□□□ -0.24
SPTLC3-204ENST00000450297 USHBP1Q8N6Y0 703 aa13.54□□□□□ -0.24
SPTLC3-204ENST00000450297 RAPGEF4Q8WZA2 1011 aa13.54□□□□□ -0.24
SPTLC3-204ENST00000450297 ANKRD36BQ8N2N9 1353 aa13.54□□□□□ -0.24
SPTLC3-204ENST00000450297 MAP3K5Q99683 1374 aa13.54□□□□□ -0.24
SPTLC3-204ENST00000450297 SLC24A1O60721 1099 aa13.53□□□□□ -0.24
SPTLC3-204ENST00000450297 C1QTNF8P60827 252 aa13.53□□□□□ -0.24
SPTLC3-204ENST00000450297 RRS1Q15050 365 aaKnown RBP13.53□□□□□ -0.24
SPTLC3-204ENST00000450297 LTN1O94822 1766 aa13.53□□□□□ -0.24
SPTLC3-204ENST00000450297 BTAF1O14981 1849 aa13.53□□□□□ -0.24
SPTLC3-204ENST00000450297 GGNBP2Q9H3C7 697 aa13.52□□□□□ -0.25
SPTLC3-204ENST00000450297 USP47Q96K76 1375 aa13.52□□□□□ -0.25
SPTLC3-204ENST00000450297 PAPPAQ13219 1627 aa13.51□□□□□ -0.25
SPTLC3-204ENST00000450297 GIGYF1O75420 1035 aaPredicted RBP13.51□□□□□ -0.25
SPTLC3-204ENST00000450297 TATP17735 454 aaPredicted RBP13.51□□□□□ -0.25
SPTLC3-204ENST00000450297 NBPF6Q5VWK0 638 aa13.51□□□□□ -0.25
SPTLC3-204ENST00000450297 MSL1Q68DK7 614 aa13.51□□□□□ -0.25
SPTLC3-204ENST00000450297 NLGN2Q8NFZ4 835 aa13.51□□□□□ -0.25
SPTLC3-204ENST00000450297 NBPF4Q96M43 638 aa13.51□□□□□ -0.25
SPTLC3-204ENST00000450297 TESK2Q96S53 571 aa13.51□□□□□ -0.25
SPTLC3-204ENST00000450297 SMG6Q86US8 1419 aaKnown RBP13.5□□□□□ -0.25
SPTLC3-204ENST00000450297 USP54Q70EL1 1684 aa13.5□□□□□ -0.25
SPTLC3-204ENST00000450297 KAT6BQ8WYB5 2073 aa13.49□□□□□ -0.25
SPTLC3-204ENST00000450297 TMF1P82094 1093 aa13.49□□□□□ -0.25
SPTLC3-204ENST00000450297 COL23A1Q86Y22 540 aaPredicted RBP13.49□□□□□ -0.25
SPTLC3-204ENST00000450297 FYB1O15117 783 aa13.48□□□□□ -0.25
SPTLC3-204ENST00000450297 GRIN3BO60391 1043 aa13.48□□□□□ -0.25
SPTLC3-204ENST00000450297 MPRIPQ6WCQ1 1025 aa13.48□□□□□ -0.25
SPTLC3-204ENST00000450297 MEGF6O75095 1541 aa13.48□□□□□ -0.25
SPTLC3-204ENST00000450297 RTL1A6NKG5 1358 aa13.47□□□□□ -0.25
SPTLC3-204ENST00000450297 NSD2O96028 1365 aa13.47□□□□□ -0.25
SPTLC3-204ENST00000450297 CGNL1Q0VF96 1302 aa13.47□□□□□ -0.25
SPTLC3-204ENST00000450297 PPM1GO15355 546 aaPredicted RBP13.47□□□□□ -0.25
SPTLC3-204ENST00000450297 HSP90AB2PQ58FF8 381 aa13.47□□□□□ -0.25
SPTLC3-204ENST00000450297 PCDH11XQ9BZA7 1347 aa13.46□□□□□ -0.25
SPTLC3-204ENST00000450297 PCDH11YQ9BZA8 1340 aa13.46□□□□□ -0.25
SPTLC3-204ENST00000450297 HMGB2P26583 209 aaKnown RBP13.46□□□□□ -0.25
SPTLC3-204ENST00000450297 YBX3P16989 372 aaKnown RBP eCLIP13.45□□□□□ -0.26
SPTLC3-204ENST00000450297 CDCA8Q53HL2 280 aa13.45□□□□□ -0.26
SPTLC3-204ENST00000450297 FLAD1Q8NFF5 587 aa13.45□□□□□ -0.26
SPTLC3-204ENST00000450297 AK7Q96M32 723 aa13.45□□□□□ -0.26
SPTLC3-204ENST00000450297 FAM208AQ9UK61 1670 aaKnown RBP13.44□□□□□ -0.26
SPTLC3-204ENST00000450297 PHF14O94880 888 aa13.44□□□□□ -0.26
SPTLC3-204ENST00000450297 PALLDQ8WX93 1383 aa13.44□□□□□ -0.26
SPTLC3-204ENST00000450297 DOT1LQ8TEK3 1739 aa13.43□□□□□ -0.26
SPTLC3-204ENST00000450297 SMARCC1Q92922 1105 aaPredicted RBP13.43□□□□□ -0.26
SPTLC3-204ENST00000450297 INSRP06213 1382 aa13.43□□□□□ -0.26
SPTLC3-204ENST00000450297 WWC3Q9ULE0 1092 aa13.42□□□□□ -0.26
SPTLC3-204ENST00000450297 CD2APQ9Y5K6 639 aa13.42□□□□□ -0.26
SPTLC3-204ENST00000450297 FLT4P35916 1363 aa13.42□□□□□ -0.26
SPTLC3-204ENST00000450297 CYP27B1O15528 508 aa13.41□□□□□ -0.26
SPTLC3-204ENST00000450297 ZNF526Q8TF50 670 aaPredicted RBP13.41□□□□□ -0.26
SPTLC3-204ENST00000450297 SPG7Q9UQ90 795 aa13.41□□□□□ -0.26
SPTLC3-204ENST00000450297 POLR3GLQ9BT43 218 aa13.4□□□□□ -0.26
SPTLC3-204ENST00000450297 EMILIN1Q9Y6C2 1016 aa13.4□□□□□ -0.26
SPTLC3-204ENST00000450297 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.39□□□□□ -0.27
SPTLC3-204ENST00000450297 POTEHQ6S545 545 aa13.39□□□□□ -0.27
SPTLC3-204ENST00000450297 SMIM5Q71RC9 77 aa13.39□□□□□ -0.27
SPTLC3-204ENST00000450297 PIGBQ92521 554 aa13.39□□□□□ -0.27
SPTLC3-204ENST00000450297 GPBP1L1Q9HC44 474 aaPredicted RBP13.39□□□□□ -0.27
SPTLC3-204ENST00000450297 CHD4Q14839 1912 aa13.39□□□□□ -0.27
SPTLC3-204ENST00000450297 CARD14Q9BXL6 1004 aa13.38□□□□□ -0.27
SPTLC3-204ENST00000450297 TMOD3Q9NYL9 352 aa13.38□□□□□ -0.27
SPTLC3-204ENST00000450297 ATP10DQ9P241 1426 aa13.38□□□□□ -0.27
SPTLC3-204ENST00000450297 KIF24Q5T7B8 1368 aa13.37□□□□□ -0.27
SPTLC3-204ENST00000450297 QSER1Q2KHR3 1735 aa13.37□□□□□ -0.27
SPTLC3-204ENST00000450297 RGPD2P0DJD1 1756 aa13.37□□□□□ -0.27
SPTLC3-204ENST00000450297 NSD3Q9BZ95 1437 aa13.37□□□□□ -0.27
SPTLC3-204ENST00000450297 LY75O60449 1722 aa13.36□□□□□ -0.27
SPTLC3-204ENST00000450297 LOC102724428A0A0B4J2F2 783 aa13.36□□□□□ -0.27
SPTLC3-204ENST00000450297 GNPATO15228 680 aa13.36□□□□□ -0.27
SPTLC3-204ENST00000450297 TNNT2P45379 298 aaPredicted RBP13.36□□□□□ -0.27
SPTLC3-204ENST00000450297 SIK1P57059 783 aa13.36□□□□□ -0.27
SPTLC3-204ENST00000450297 IGSF1Q8N6C5 1336 aa13.36□□□□□ -0.27
SPTLC3-204ENST00000450297 TUBGCP6Q96RT7 1819 aa13.35□□□□□ -0.27
SPTLC3-204ENST00000450297 ATP6V1AP38606 617 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms