RNA–Protein interactions for RNA: ENST00000450198.6

SMARCA2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-214ENST00000450198 SKIDA1Q1XH10 827 aa17■□□□□ 0.31
SMARCA2-214ENST00000450198 CABP1Q9NZU7 370 aa17■□□□□ 0.31
SMARCA2-214ENST00000450198 CEP131Q9UPN4 1083 aa17■□□□□ 0.31
SMARCA2-214ENST00000450198 FERMT2Q96AC1 680 aa17■□□□□ 0.31
SMARCA2-214ENST00000450198 RPGRIP1LQ68CZ1 1315 aa17■□□□□ 0.31
SMARCA2-214ENST00000450198 CFAP70Q5T0N1 1121 aa16.99■□□□□ 0.31
SMARCA2-214ENST00000450198 PRG4Q92954 1404 aaPredicted RBP16.99■□□□□ 0.31
SMARCA2-214ENST00000450198 TEX13AQ9BXU3 409 aaPredicted RBP16.99■□□□□ 0.31
SMARCA2-214ENST00000450198 COMMD10Q9Y6G5 202 aa16.99■□□□□ 0.31
SMARCA2-214ENST00000450198 PTCD1O75127 700 aaKnown RBP16.99■□□□□ 0.31
SMARCA2-214ENST00000450198 HLA-DOAP06340 250 aa16.99■□□□□ 0.31
SMARCA2-214ENST00000450198 LRRCC1Q9C099 1032 aa16.99■□□□□ 0.31
SMARCA2-214ENST00000450198 ANKRD50Q9ULJ7 1429 aa16.99■□□□□ 0.31
SMARCA2-214ENST00000450198 B4DLN1 442 aa16.99■□□□□ 0.31
SMARCA2-214ENST00000450198 SLC5A1P13866 664 aa16.99■□□□□ 0.31
SMARCA2-214ENST00000450198 MRPL12P52815 198 aaKnown RBP16.99■□□□□ 0.31
SMARCA2-214ENST00000450198 IMMTQ16891 758 aaKnown RBP16.99■□□□□ 0.31
SMARCA2-214ENST00000450198 DDX46Q7L014 1031 aaKnown RBP16.99■□□□□ 0.31
SMARCA2-214ENST00000450198 AEBP1Q8IUX7 1158 aa16.98■□□□□ 0.31
SMARCA2-214ENST00000450198 FMNL2Q96PY5 1086 aa16.98■□□□□ 0.31
SMARCA2-214ENST00000450198 CNTLNQ9NXG0 1405 aa16.98■□□□□ 0.31
SMARCA2-214ENST00000450198 AACSQ86V21 672 aa16.98■□□□□ 0.31
SMARCA2-214ENST00000450198 CEP57L1Q8IYX8 460 aa16.98■□□□□ 0.31
SMARCA2-214ENST00000450198 CCDC7Q96M83 1385 aa16.98■□□□□ 0.31
SMARCA2-214ENST00000450198 KRT32Q14532 448 aa16.98■□□□□ 0.31
SMARCA2-214ENST00000450198 AMOTQ4VCS5 1084 aa16.98■□□□□ 0.31
SMARCA2-214ENST00000450198 LRSAM1Q6UWE0 723 aa16.98■□□□□ 0.31
SMARCA2-214ENST00000450198 MPRIPQ6WCQ1 1025 aa16.98■□□□□ 0.31
SMARCA2-214ENST00000450198 BIN2Q9UBW5 565 aaPredicted RBP16.98■□□□□ 0.31
SMARCA2-214ENST00000450198 TOP2AP11388 1531 aaKnown RBP16.97■□□□□ 0.31
SMARCA2-214ENST00000450198 PRKRIP1Q9H875 184 aaPredicted RBP16.97■□□□□ 0.31
SMARCA2-214ENST00000450198 SERPINC1P01008 464 aa16.97■□□□□ 0.31
SMARCA2-214ENST00000450198 KIF20AO95235 890 aa16.97■□□□□ 0.31
SMARCA2-214ENST00000450198 NOP2P46087 812 aaKnown RBP16.97■□□□□ 0.31
SMARCA2-214ENST00000450198 MAP3K12Q12852 859 aa16.97■□□□□ 0.31
SMARCA2-214ENST00000450198 PLCD3Q8N3E9 789 aa16.97■□□□□ 0.31
SMARCA2-214ENST00000450198 GCC1Q96CN9 775 aa16.97■□□□□ 0.31
SMARCA2-214ENST00000450198 ATAD2BQ9ULI0 1458 aa16.96■□□□□ 0.31
SMARCA2-214ENST00000450198 ZNF771Q7L3S4 317 aaPredicted RBP16.96■□□□□ 0.31
SMARCA2-214ENST00000450198 TRIM5Q9C035 493 aa16.96■□□□□ 0.31
SMARCA2-214ENST00000450198 TRMT112Q9UI30 125 aaKnown RBP16.96■□□□□ 0.31
SMARCA2-214ENST00000450198 SSX2IPQ9Y2D8 614 aa16.96■□□□□ 0.31
SMARCA2-214ENST00000450198 PDE4AP27815 886 aa16.96■□□□□ 0.31
SMARCA2-214ENST00000450198 TRAF1Q13077 416 aa16.96■□□□□ 0.31
SMARCA2-214ENST00000450198 TMEM266Q2M3C6 531 aa16.96■□□□□ 0.31
SMARCA2-214ENST00000450198 EXOC6Q8TAG9 804 aa16.96■□□□□ 0.31
SMARCA2-214ENST00000450198 CCDC85AQ96PX6 553 aaPredicted RBP16.96■□□□□ 0.31
SMARCA2-214ENST00000450198 C22orf23Q9BZE7 217 aa16.96■□□□□ 0.31
SMARCA2-214ENST00000450198 LMOD1P29536 600 aaPredicted RBP16.95■□□□□ 0.3
SMARCA2-214ENST00000450198 CDC5LQ99459 802 aaKnown RBP16.95■□□□□ 0.3
SMARCA2-214ENST00000450198 PRDM2Q13029 1718 aa16.95■□□□□ 0.3
SMARCA2-214ENST00000450198 H0YHG0 523 aa16.95■□□□□ 0.3
SMARCA2-214ENST00000450198 BAG4O95429 457 aaKnown RBP16.95■□□□□ 0.3
SMARCA2-214ENST00000450198 TCP11L2Q8N4U5 519 aa16.95■□□□□ 0.3
SMARCA2-214ENST00000450198 OGFOD1Q8N543 542 aa16.95■□□□□ 0.3
SMARCA2-214ENST00000450198 FERMT1Q9BQL6 677 aa16.95■□□□□ 0.3
SMARCA2-214ENST00000450198 CCDC196A0A1B0GTZ2 297 aa16.95■□□□□ 0.3
SMARCA2-214ENST00000450198 CTCFLQ8NI51 663 aaPredicted RBP16.95■□□□□ 0.3
SMARCA2-214ENST00000450198 TSG101Q99816 390 aa16.95■□□□□ 0.3
SMARCA2-214ENST00000450198 HMGN5P82970 282 aaKnown RBP16.95■□□□□ 0.3
SMARCA2-214ENST00000450198 TAF4BQ92750 862 aa16.95■□□□□ 0.3
SMARCA2-214ENST00000450198 GNAT3A8MTJ3 354 aa16.95■□□□□ 0.3
SMARCA2-214ENST00000450198 IFIT5Q13325 482 aaKnown RBP16.95■□□□□ 0.3
SMARCA2-214ENST00000450198 LARP1Q6PKG0 1096 aaKnown RBP16.95■□□□□ 0.3
SMARCA2-214ENST00000450198 SPINK5Q9NQ38 1064 aaPredicted RBP16.95■□□□□ 0.3
SMARCA2-214ENST00000450198 ATAD2Q6PL18 1390 aa16.94■□□□□ 0.3
SMARCA2-214ENST00000450198 ME1P48163 572 aa16.94■□□□□ 0.3
SMARCA2-214ENST00000450198 SPTY2D1Q68D10 685 aaPredicted RBP16.94■□□□□ 0.3
SMARCA2-214ENST00000450198 GOLGA6L7A0A1B0GV03 622 aa16.94■□□□□ 0.3
SMARCA2-214ENST00000450198 NEK4P51957 841 aa16.94■□□□□ 0.3
SMARCA2-214ENST00000450198 CBFA2T2O43439 604 aa16.94■□□□□ 0.3
SMARCA2-214ENST00000450198 BAG3O95817 575 aa16.94■□□□□ 0.3
SMARCA2-214ENST00000450198 PIBF1Q8WXW3 757 aa16.94■□□□□ 0.3
SMARCA2-214ENST00000450198 TTC21AQ8NDW8 1320 aa16.93■□□□□ 0.3
SMARCA2-214ENST00000450198 IQCEQ6IPM2 695 aa16.93■□□□□ 0.3
SMARCA2-214ENST00000450198 IQCA1Q86XH1 822 aa16.93■□□□□ 0.3
SMARCA2-214ENST00000450198 LRRC45Q96CN5 670 aa16.93■□□□□ 0.3
SMARCA2-214ENST00000450198 CCDC39Q9UFE4 941 aa16.93■□□□□ 0.3
SMARCA2-214ENST00000450198 PPP1R42Q7Z4L9 355 aa16.93■□□□□ 0.3
SMARCA2-214ENST00000450198 CCDC91Q7Z6B0 441 aa16.93■□□□□ 0.3
SMARCA2-214ENST00000450198 PPP4R3BQ5MIZ7 849 aa16.93■□□□□ 0.3
SMARCA2-214ENST00000450198 ANKRD18BA2A2Z9 1011 aa16.93■□□□□ 0.3
SMARCA2-214ENST00000450198 MINDY4BA8MYZ0 360 aa16.93■□□□□ 0.3
SMARCA2-214ENST00000450198 CEBPZQ03701 1054 aaKnown RBP16.93■□□□□ 0.3
SMARCA2-214ENST00000450198 CADPS2Q86UW7 1296 aa16.93■□□□□ 0.3
SMARCA2-214ENST00000450198 MBD3O95983 291 aa16.93■□□□□ 0.3
SMARCA2-214ENST00000450198 SRGAP3O43295 1099 aa16.92■□□□□ 0.3
SMARCA2-214ENST00000450198 CETN1Q12798 172 aa16.92■□□□□ 0.3
SMARCA2-214ENST00000450198 BLOC1S2Q6QNY1 142 aa16.92■□□□□ 0.3
SMARCA2-214ENST00000450198 GRIN2BQ13224 1484 aa16.92■□□□□ 0.3
SMARCA2-214ENST00000450198 RAPGEF3O95398 923 aa16.92■□□□□ 0.3
SMARCA2-214ENST00000450198 VPS36Q86VN1 386 aa16.92■□□□□ 0.3
SMARCA2-214ENST00000450198 RNF41Q9H4P4 317 aaPredicted RBP16.92■□□□□ 0.3
SMARCA2-214ENST00000450198 ZBED9Q6R2W3 1325 aa16.92■□□□□ 0.3
SMARCA2-214ENST00000450198 STAMBPO95630 424 aa16.92■□□□□ 0.3
SMARCA2-214ENST00000450198 STXBP4Q6ZWJ1 553 aa16.92■□□□□ 0.3
SMARCA2-214ENST00000450198 JDP2Q8WYK2 163 aa16.92■□□□□ 0.3
SMARCA2-214ENST00000450198 CUX1P39880 1505 aa16.92■□□□□ 0.3
SMARCA2-214ENST00000450198 CT47B1P0C2W7 299 aaPredicted RBP16.91■□□□□ 0.3
SMARCA2-214ENST00000450198 AXDND1Q5T1B0 1012 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms