RNA–Protein interactions for RNA: ENST00000450102.6

SCN5A-208, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 6,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-208ENST00000450102 LARP1Q6PKG0 1096 aaKnown RBP12.71□□□□□ -0.38
SCN5A-208ENST00000450102 CEP131Q9UPN4 1083 aa12.71□□□□□ -0.38
SCN5A-208ENST00000450102 POLR3DP05423 398 aaPredicted RBP12.7□□□□□ -0.38
SCN5A-208ENST00000450102 SPA17Q15506 151 aa12.7□□□□□ -0.38
SCN5A-208ENST00000450102 SPATA32Q96LK8 384 aa12.7□□□□□ -0.38
SCN5A-208ENST00000450102 MACROD2A1Z1Q3 448 aa12.7□□□□□ -0.38
SCN5A-208ENST00000450102 MTHFSP49914 203 aa12.7□□□□□ -0.38
SCN5A-208ENST00000450102 DDX23Q9BUQ8 820 aaKnown RBP12.7□□□□□ -0.38
SCN5A-208ENST00000450102 AACSQ86V21 672 aa12.7□□□□□ -0.38
SCN5A-208ENST00000450102 FERMT2Q96AC1 680 aa12.7□□□□□ -0.38
SCN5A-208ENST00000450102 UPF3BQ9BZI7 483 aaKnown RBP12.7□□□□□ -0.38
SCN5A-208ENST00000450102 WDR33Q9C0J8 1336 aaKnown RBP12.7□□□□□ -0.38
SCN5A-208ENST00000450102 LIG1P18858 919 aa12.7□□□□□ -0.38
SCN5A-208ENST00000450102 PRKAR2BP31323 418 aa12.7□□□□□ -0.38
SCN5A-208ENST00000450102 BLOC1S2Q6QNY1 142 aa12.7□□□□□ -0.38
SCN5A-208ENST00000450102 TSG101Q99816 390 aa12.7□□□□□ -0.38
SCN5A-208ENST00000450102 CEP126Q9P2H0 1117 aa12.7□□□□□ -0.38
SCN5A-208ENST00000450102 IDH1O75874 414 aaKnown RBP12.7□□□□□ -0.38
SCN5A-208ENST00000450102 ZNF287Q9HBT7 754 aa12.7□□□□□ -0.38
SCN5A-208ENST00000450102 ABCF2Q9UG63 623 aa12.7□□□□□ -0.38
SCN5A-208ENST00000450102 CA8P35219 290 aa12.69□□□□□ -0.38
SCN5A-208ENST00000450102 SMTNL1A8MU46 457 aa12.69□□□□□ -0.38
SCN5A-208ENST00000450102 CTNNA2P26232 953 aa12.69□□□□□ -0.38
SCN5A-208ENST00000450102 TMEM132EQ6IEE7 984 aa12.69□□□□□ -0.38
SCN5A-208ENST00000450102 CCDC178Q5BJE1 867 aa12.69□□□□□ -0.38
SCN5A-208ENST00000450102 PNISRQ8TF01 805 aaKnown RBP12.69□□□□□ -0.38
SCN5A-208ENST00000450102 PUS7Q96PZ0 661 aaKnown RBP12.69□□□□□ -0.38
SCN5A-208ENST00000450102 ZNF530Q6P9A1 599 aaPredicted RBP12.69□□□□□ -0.38
SCN5A-208ENST00000450102 GCC1Q96CN9 775 aa12.69□□□□□ -0.38
SCN5A-208ENST00000450102 PLCD3Q8N3E9 789 aa12.69□□□□□ -0.38
SCN5A-208ENST00000450102 AIDAQ96BJ3 306 aa12.69□□□□□ -0.38
SCN5A-208ENST00000450102 SRCIN1Q9C0H9 1055 aa12.69□□□□□ -0.38
SCN5A-208ENST00000450102 CRACR2AQ9BSW2 395 aa12.68□□□□□ -0.38
SCN5A-208ENST00000450102 CACNA2D4Q7Z3S7 1137 aa12.68□□□□□ -0.38
SCN5A-208ENST00000450102 TXNDC2Q86VQ3 553 aa12.68□□□□□ -0.38
SCN5A-208ENST00000450102 TTC16Q8NEE8 873 aa12.68□□□□□ -0.38
SCN5A-208ENST00000450102 CCDC85AQ96PX6 553 aaPredicted RBP12.68□□□□□ -0.38
SCN5A-208ENST00000450102 CCT4P50991 539 aaKnown RBP12.68□□□□□ -0.38
SCN5A-208ENST00000450102 IFFO1Q0D2I5 559 aa12.68□□□□□ -0.38
SCN5A-208ENST00000450102 PDRG1Q9NUG6 133 aa12.68□□□□□ -0.38
SCN5A-208ENST00000450102 IMMTQ16891 758 aaKnown RBP12.68□□□□□ -0.38
SCN5A-208ENST00000450102 FILIP1Q7Z7B0 1213 aa12.68□□□□□ -0.38
SCN5A-208ENST00000450102 VPS36Q86VN1 386 aa12.68□□□□□ -0.38
SCN5A-208ENST00000450102 CUL5Q93034 780 aa12.68□□□□□ -0.38
SCN5A-208ENST00000450102 MKNK2Q9HBH9 465 aa12.68□□□□□ -0.38
SCN5A-208ENST00000450102 SSX2IPQ9Y2D8 614 aa12.68□□□□□ -0.38
SCN5A-208ENST00000450102 FKBP15Q5T1M5 1219 aa12.67□□□□□ -0.38
SCN5A-208ENST00000450102 EXOSC9Q06265 439 aaKnown RBP12.67□□□□□ -0.38
SCN5A-208ENST00000450102 CFAP100Q494V2 611 aa12.67□□□□□ -0.38
SCN5A-208ENST00000450102 OSCARQ8IYS5 282 aa12.67□□□□□ -0.38
SCN5A-208ENST00000450102 FEZ1Q99689 392 aa12.67□□□□□ -0.38
SCN5A-208ENST00000450102 PTPRGP23470 1445 aa12.67□□□□□ -0.38
SCN5A-208ENST00000450102 ANKRD18BA2A2Z9 1011 aa12.67□□□□□ -0.38
SCN5A-208ENST00000450102 SMC1AQ14683 1233 aaKnown RBP12.67□□□□□ -0.38
SCN5A-208ENST00000450102 PDZRN3Q9UPQ7 1066 aa12.67□□□□□ -0.38
SCN5A-208ENST00000450102 CCDC96Q2M329 555 aa12.66□□□□□ -0.38
SCN5A-208ENST00000450102 LUZP1Q86V48 1076 aa12.66□□□□□ -0.38
SCN5A-208ENST00000450102 JAKMIP1Q96N16 626 aaKnown RBP12.66□□□□□ -0.38
SCN5A-208ENST00000450102 NOB1Q9ULX3 412 aaKnown RBP12.66□□□□□ -0.38
SCN5A-208ENST00000450102 FERP16591 822 aa12.66□□□□□ -0.38
SCN5A-208ENST00000450102 BCCIPQ9P287 314 aaKnown RBP eCLIP12.66□□□□□ -0.38
SCN5A-208ENST00000450102 GCOM1H8Y6P7 765 aaPredicted RBP12.66□□□□□ -0.38
SCN5A-208ENST00000450102 MYZAPP0CAP1 466 aa12.66□□□□□ -0.38
SCN5A-208ENST00000450102 TMCO3Q6UWJ1 677 aa12.66□□□□□ -0.38
SCN5A-208ENST00000450102 PODXL2Q9NZ53 605 aa12.66□□□□□ -0.38
SCN5A-208ENST00000450102 SHTN1A0MZ66 631 aa12.66□□□□□ -0.38
SCN5A-208ENST00000450102 TNNT1P13805 278 aa12.66□□□□□ -0.38
SCN5A-208ENST00000450102 HMGB2P26583 209 aaKnown RBP12.66□□□□□ -0.38
SCN5A-208ENST00000450102 NUP62CLQ9H1M0 184 aa12.66□□□□□ -0.38
SCN5A-208ENST00000450102 TCP11L2Q8N4U5 519 aa12.65□□□□□ -0.38
SCN5A-208ENST00000450102 DNA2P51530 1060 aa12.65□□□□□ -0.38
SCN5A-208ENST00000450102 CWC27Q6UX04 472 aaKnown RBP12.65□□□□□ -0.38
SCN5A-208ENST00000450102 CECR2Q9BXF3 1484 aa12.65□□□□□ -0.38
SCN5A-208ENST00000450102 ERICH4A6NGS2 130 aa12.65□□□□□ -0.38
SCN5A-208ENST00000450102 MINDY4BA8MYZ0 360 aa12.65□□□□□ -0.38
SCN5A-208ENST00000450102 MRPS9P82933 396 aaKnown RBP12.65□□□□□ -0.38
SCN5A-208ENST00000450102 PRDM11Q9NQV5 511 aa12.65□□□□□ -0.38
SCN5A-208ENST00000450102 RRBP1Q9P2E9 1410 aaKnown RBP12.65□□□□□ -0.39
SCN5A-208ENST00000450102 CAVIN4Q5BKX8 364 aa12.64□□□□□ -0.39
SCN5A-208ENST00000450102 SULT6B1Q6IMI4 303 aa12.64□□□□□ -0.39
SCN5A-208ENST00000450102 FANCIQ9NVI1 1328 aa12.64□□□□□ -0.39
SCN5A-208ENST00000450102 ZPR1O75312 459 aa12.64□□□□□ -0.39
SCN5A-208ENST00000450102 EHMT1Q9H9B1 1298 aa12.64□□□□□ -0.39
SCN5A-208ENST00000450102 ANKIB1Q9P2G1 1089 aa12.64□□□□□ -0.39
SCN5A-208ENST00000450102 CNTLNQ9NXG0 1405 aa12.64□□□□□ -0.39
SCN5A-208ENST00000450102 KRT32Q14532 448 aa12.64□□□□□ -0.39
SCN5A-208ENST00000450102 TICAM2Q86XR7 235 aa12.64□□□□□ -0.39
SCN5A-208ENST00000450102 TSNARE1Q96NA8 513 aa12.64□□□□□ -0.39
SCN5A-208ENST00000450102 METTL24Q5JXM2 366 aa12.64□□□□□ -0.39
SCN5A-208ENST00000450102 DDX11Q96FC9 970 aa12.64□□□□□ -0.39
SCN5A-208ENST00000450102 KLHL10Q6JEL2 608 aa12.64□□□□□ -0.39
SCN5A-208ENST00000450102 ZSCAN31Q96LW9 406 aaPredicted RBP12.64□□□□□ -0.39
SCN5A-208ENST00000450102 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.64□□□□□ -0.39
SCN5A-208ENST00000450102 GBP3Q9H0R5 595 aa12.64□□□□□ -0.39
SCN5A-208ENST00000450102 UBXN4Q92575 508 aa12.63□□□□□ -0.39
SCN5A-208ENST00000450102 BTBD11A6QL63 1104 aa12.63□□□□□ -0.39
SCN5A-208ENST00000450102 SPATA24Q86W54 205 aa12.63□□□□□ -0.39
SCN5A-208ENST00000450102 ZNF652Q9Y2D9 606 aa12.63□□□□□ -0.39
SCN5A-208ENST00000450102 SRGAP3O43295 1099 aa12.63□□□□□ -0.39
SCN5A-208ENST00000450102 GIGYF2Q6Y7W6 1299 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms