RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 LTV1Q96GA3 475 aaPredicted RBP19.54■□□□□ 0.72
CPSF7-207ENST00000449811 CCNL1Q9UK58 526 aaPredicted RBP19.54■□□□□ 0.72
CPSF7-207ENST00000449811 NSD2O96028 1365 aa19.54■□□□□ 0.72
CPSF7-207ENST00000449811 EDC4Q6P2E9 1401 aaKnown RBP19.53■□□□□ 0.72
CPSF7-207ENST00000449811 LY75O60449 1722 aa19.53■□□□□ 0.72
CPSF7-207ENST00000449811 DOT1LQ8TEK3 1739 aa19.52■□□□□ 0.72
CPSF7-207ENST00000449811 COL23A1Q86Y22 540 aaPredicted RBP19.52■□□□□ 0.72
CPSF7-207ENST00000449811 FAM208AQ9UK61 1670 aaKnown RBP19.52■□□□□ 0.71
CPSF7-207ENST00000449811 GPBP1L1Q9HC44 474 aaPredicted RBP19.51■□□□□ 0.71
CPSF7-207ENST00000449811 MSL1Q68DK7 614 aa19.5■□□□□ 0.71
CPSF7-207ENST00000449811 SLC12A5Q9H2X9 1139 aa19.5■□□□□ 0.71
CPSF7-207ENST00000449811 USP47Q96K76 1375 aa19.49■□□□□ 0.71
CPSF7-207ENST00000449811 ZCRB1Q8TBF4 217 aaKnown RBP19.49■□□□□ 0.71
CPSF7-207ENST00000449811 TERF2IPQ9NYB0 399 aa19.49■□□□□ 0.71
CPSF7-207ENST00000449811 A0A1W2PP64 1363 aa19.48■□□□□ 0.71
CPSF7-207ENST00000449811 SIN3AQ96ST3 1273 aa19.48■□□□□ 0.71
CPSF7-207ENST00000449811 CD2APQ9Y5K6 639 aa19.47■□□□□ 0.71
CPSF7-207ENST00000449811 HSPA6P17066 643 aa19.46■□□□□ 0.71
CPSF7-207ENST00000449811 ZNF526Q8TF50 670 aaPredicted RBP19.46■□□□□ 0.71
CPSF7-207ENST00000449811 MEGF6O75095 1541 aa19.46■□□□□ 0.71
CPSF7-207ENST00000449811 ADCY9O60503 1353 aa19.45■□□□□ 0.7
CPSF7-207ENST00000449811 HOXC9P31274 260 aa19.45■□□□□ 0.7
CPSF7-207ENST00000449811 MAP3K19Q56UN5 1328 aa19.45■□□□□ 0.7
CPSF7-207ENST00000449811 AMPHP49418 695 aa19.44■□□□□ 0.7
CPSF7-207ENST00000449811 NEUROD1Q13562 356 aa19.44■□□□□ 0.7
CPSF7-207ENST00000449811 COG3Q96JB2 828 aa19.43■□□□□ 0.7
CPSF7-207ENST00000449811 FLAD1Q8NFF5 587 aa19.42■□□□□ 0.7
CPSF7-207ENST00000449811 CARD11Q9BXL7 1154 aa19.42■□□□□ 0.7
CPSF7-207ENST00000449811 HMGB2P26583 209 aaKnown RBP19.41■□□□□ 0.7
CPSF7-207ENST00000449811 C5P01031 1676 aa19.4■□□□□ 0.7
CPSF7-207ENST00000449811 FBLN1P23142 703 aa19.4■□□□□ 0.7
CPSF7-207ENST00000449811 CGNL1Q0VF96 1302 aa19.4■□□□□ 0.7
CPSF7-207ENST00000449811 RGPD2P0DJD1 1756 aa19.39■□□□□ 0.7
CPSF7-207ENST00000449811 PUS7Q96PZ0 661 aaKnown RBP19.39■□□□□ 0.69
CPSF7-207ENST00000449811 NBPF6Q5VWK0 638 aa19.38■□□□□ 0.69
CPSF7-207ENST00000449811 PALLDQ8WX93 1383 aa19.38■□□□□ 0.69
CPSF7-207ENST00000449811 RAPGEF4Q8WZA2 1011 aa19.38■□□□□ 0.69
CPSF7-207ENST00000449811 NBPF4Q96M43 638 aa19.38■□□□□ 0.69
CPSF7-207ENST00000449811 RTL1A6NKG5 1358 aa19.37■□□□□ 0.69
CPSF7-207ENST00000449811 IGSF1Q8N6C5 1336 aa19.37■□□□□ 0.69
CPSF7-207ENST00000449811 USHBP1Q8N6Y0 703 aa19.37■□□□□ 0.69
CPSF7-207ENST00000449811 WWC3Q9ULE0 1092 aa19.37■□□□□ 0.69
CPSF7-207ENST00000449811 AK7Q96M32 723 aa19.36■□□□□ 0.69
CPSF7-207ENST00000449811 PCDH11XQ9BZA7 1347 aa19.35■□□□□ 0.69
CPSF7-207ENST00000449811 PCDH11YQ9BZA8 1340 aa19.35■□□□□ 0.69
CPSF7-207ENST00000449811 TATP17735 454 aaPredicted RBP19.35■□□□□ 0.69
CPSF7-207ENST00000449811 SMG6Q86US8 1419 aaKnown RBP19.34■□□□□ 0.69
CPSF7-207ENST00000449811 RRS1Q15050 365 aaKnown RBP19.34■□□□□ 0.69
CPSF7-207ENST00000449811 MPRIPQ6WCQ1 1025 aa19.34■□□□□ 0.69
CPSF7-207ENST00000449811 TAF1LQ8IZX4 1826 aa19.34■□□□□ 0.69
CPSF7-207ENST00000449811 C4BP0C0L5 1744 aa19.34■□□□□ 0.69
CPSF7-207ENST00000449811 KIF3CO14782 793 aa19.33■□□□□ 0.68
CPSF7-207ENST00000449811 AMIGO3Q86WK7 504 aa19.33■□□□□ 0.68
CPSF7-207ENST00000449811 PHF14O94880 888 aa19.32■□□□□ 0.68
CPSF7-207ENST00000449811 SMARCC1Q92922 1105 aaPredicted RBP19.32■□□□□ 0.68
CPSF7-207ENST00000449811 NSD3Q9BZ95 1437 aa19.32■□□□□ 0.68
CPSF7-207ENST00000449811 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.3■□□□□ 0.68
CPSF7-207ENST00000449811 SMIM5Q71RC9 77 aa19.3■□□□□ 0.68
CPSF7-207ENST00000449811 TOGARAM1Q9Y4F4 1720 aa19.3■□□□□ 0.68
CPSF7-207ENST00000449811 APLP1P51693 650 aa19.29■□□□□ 0.68
CPSF7-207ENST00000449811 CYP27B1O15528 508 aa19.28■□□□□ 0.68
CPSF7-207ENST00000449811 SSFA2P28290 1259 aa19.28■□□□□ 0.68
CPSF7-207ENST00000449811 UBR3Q6ZT12 1888 aa19.28■□□□□ 0.68
CPSF7-207ENST00000449811 TESK2Q96S53 571 aa19.27■□□□□ 0.68
CPSF7-207ENST00000449811 GGNBP2Q9H3C7 697 aa19.27■□□□□ 0.68
CPSF7-207ENST00000449811 CICQ96RK0 1608 aaPredicted RBP19.26■□□□□ 0.67
CPSF7-207ENST00000449811 HSP90AB2PQ58FF8 381 aa19.26■□□□□ 0.67
CPSF7-207ENST00000449811 INSRP06213 1382 aa19.26■□□□□ 0.67
CPSF7-207ENST00000449811 FYB1O15117 783 aa19.25■□□□□ 0.67
CPSF7-207ENST00000449811 PIGBQ92521 554 aa19.25■□□□□ 0.67
CPSF7-207ENST00000449811 FLT4P35916 1363 aa19.24■□□□□ 0.67
CPSF7-207ENST00000449811 ITGB4P16144 1822 aa19.24■□□□□ 0.67
CPSF7-207ENST00000449811 TOMM70O94826 608 aa19.24■□□□□ 0.67
CPSF7-207ENST00000449811 LINC00116Q8NCU8 138 aa19.24■□□□□ 0.67
CPSF7-207ENST00000449811 ST20-MTHFSA0A0A6YYL1 179 aa19.23■□□□□ 0.67
CPSF7-207ENST00000449811 LOC102724428A0A0B4J2F2 783 aa19.23■□□□□ 0.67
CPSF7-207ENST00000449811 SIK1P57059 783 aa19.23■□□□□ 0.67
CPSF7-207ENST00000449811 GNPATO15228 680 aa19.22■□□□□ 0.67
CPSF7-207ENST00000449811 SLC24A1O60721 1099 aa19.22■□□□□ 0.67
CPSF7-207ENST00000449811 DNAJC5GQ8N7S2 189 aa19.22■□□□□ 0.67
CPSF7-207ENST00000449811 PXDNLA1KZ92 1463 aa19.22■□□□□ 0.67
CPSF7-207ENST00000449811 KIF24Q5T7B8 1368 aa19.21■□□□□ 0.67
CPSF7-207ENST00000449811 MMP10P09238 476 aa19.21■□□□□ 0.67
CPSF7-207ENST00000449811 NKX1-1Q15270 411 aaPredicted RBP19.2■□□□□ 0.66
CPSF7-207ENST00000449811 BCS1LQ9Y276 419 aa19.2■□□□□ 0.66
CPSF7-207ENST00000449811 MAP2P11137 1827 aaKnown RBP19.2■□□□□ 0.66
CPSF7-207ENST00000449811 PKD1L3Q7Z443 1732 aa19.2■□□□□ 0.66
CPSF7-207ENST00000449811 TONSLQ96HA7 1378 aa19.19■□□□□ 0.66
CPSF7-207ENST00000449811 TGFB2P61812 414 aa19.19■□□□□ 0.66
CPSF7-207ENST00000449811 TMOD3Q9NYL9 352 aa19.19■□□□□ 0.66
CPSF7-207ENST00000449811 SPG7Q9UQ90 795 aa19.19■□□□□ 0.66
CPSF7-207ENST00000449811 ATP6V1AP38606 617 aa19.18■□□□□ 0.66
CPSF7-207ENST00000449811 ITPK1Q13572 414 aa19.18■□□□□ 0.66
CPSF7-207ENST00000449811 ARHGAP27Q6ZUM4 889 aa19.17■□□□□ 0.66
CPSF7-207ENST00000449811 NMRK2Q9NPI5 230 aa19.17■□□□□ 0.66
CPSF7-207ENST00000449811 ASAP1Q9ULH1 1129 aa19.17■□□□□ 0.66
CPSF7-207ENST00000449811 A0A0G2JLW4 131 aa19.16■□□□□ 0.66
CPSF7-207ENST00000449811 KIAA1551Q9HCM1 1747 aa19.16■□□□□ 0.66
CPSF7-207ENST00000449811 KIF13BQ9NQT8 1826 aa19.16■□□□□ 0.66
CPSF7-207ENST00000449811 EMILIN1Q9Y6C2 1016 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms