RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 WNK3Q9BYP7 1800 aa21.18■□□□□ 0.98
TOP3B-211ENST00000449704 SULT6B1Q6IMI4 303 aa21.17■□□□□ 0.98
TOP3B-211ENST00000449704 CFAP53Q96M91 514 aa21.17■□□□□ 0.98
TOP3B-211ENST00000449704 NCAPD2Q15021 1401 aa21.16■□□□□ 0.98
TOP3B-211ENST00000449704 EN1Q05925 392 aaPredicted RBP21.16■□□□□ 0.98
TOP3B-211ENST00000449704 PTF1AQ7RTS3 328 aa21.16■□□□□ 0.98
TOP3B-211ENST00000449704 AEBP1Q8IUX7 1158 aa21.16■□□□□ 0.98
TOP3B-211ENST00000449704 SPG7Q9UQ90 795 aa21.16■□□□□ 0.98
TOP3B-211ENST00000449704 BCL9O00512 1426 aa21.15■□□□□ 0.98
TOP3B-211ENST00000449704 BCL11BQ9C0K0 894 aaPredicted RBP21.15■□□□□ 0.98
TOP3B-211ENST00000449704 PCDH11XQ9BZA7 1347 aa21.14■□□□□ 0.97
TOP3B-211ENST00000449704 PCDH11YQ9BZA8 1340 aa21.14■□□□□ 0.97
TOP3B-211ENST00000449704 KCNQ2O43526 872 aa21.14■□□□□ 0.97
TOP3B-211ENST00000449704 PARD3Q8TEW0 1356 aa21.13■□□□□ 0.97
TOP3B-211ENST00000449704 U2SURPO15042 1029 aaKnown RBP21.13■□□□□ 0.97
TOP3B-211ENST00000449704 CYP27B1O15528 508 aa21.12■□□□□ 0.97
TOP3B-211ENST00000449704 HMOX1P09601 288 aa21.12■□□□□ 0.97
TOP3B-211ENST00000449704 RALBP1Q15311 655 aa21.12■□□□□ 0.97
TOP3B-211ENST00000449704 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.12■□□□□ 0.976e-7■■□□□ 11.4
TOP3B-211ENST00000449704 EZH2Q15910 746 aaKnown RBP21.11■□□□□ 0.97
TOP3B-211ENST00000449704 SYTL4Q96C24 671 aaPredicted RBP21.11■□□□□ 0.97
TOP3B-211ENST00000449704 PLEKHO1Q53GL0 409 aaPredicted RBP21.1■□□□□ 0.97
TOP3B-211ENST00000449704 PRIM1P49642 420 aaKnown RBP21.09■□□□□ 0.97
TOP3B-211ENST00000449704 CAMKK2Q96RR4 588 aa21.09■□□□□ 0.97
TOP3B-211ENST00000449704 NUDCQ9Y266 331 aa21.09■□□□□ 0.97
TOP3B-211ENST00000449704 COL3A1P02461 1466 aaPredicted RBP21.07■□□□□ 0.96
TOP3B-211ENST00000449704 RGPD1P0DJD0 1748 aa21.07■□□□□ 0.96
TOP3B-211ENST00000449704 AMOTQ4VCS5 1084 aa21.07■□□□□ 0.96
TOP3B-211ENST00000449704 ZNF530Q6P9A1 599 aaPredicted RBP21.07■□□□□ 0.96
TOP3B-211ENST00000449704 IFNL2Q8IZJ0 200 aa21.07■□□□□ 0.96
TOP3B-211ENST00000449704 KDRP35968 1356 aa21.07■□□□□ 0.96
TOP3B-211ENST00000449704 PLSCR1O15162 318 aa21.05■□□□□ 0.96
TOP3B-211ENST00000449704 PHKG2P15735 406 aa21.05■□□□□ 0.96
TOP3B-211ENST00000449704 U2AF1L5P0DN76 240 aaPredicted RBP21.04■□□□□ 0.96
TOP3B-211ENST00000449704 U2AF1Q01081 240 aaKnown RBP eCLIP21.04■□□□□ 0.96
TOP3B-211ENST00000449704 NKX1-1Q15270 411 aaPredicted RBP21.04■□□□□ 0.96
TOP3B-211ENST00000449704 C1orf141Q5JVX7 400 aa21.03■□□□□ 0.96
TOP3B-211ENST00000449704 TNS1Q9HBL0 1735 aaKnown RBP21.03■□□□□ 0.96
TOP3B-211ENST00000449704 MYBBP1AQ9BQG0 1328 aaKnown RBP21.03■□□□□ 0.96
TOP3B-211ENST00000449704 PLEKHG2Q9H7P9 1386 aa21.02■□□□□ 0.96
TOP3B-211ENST00000449704 PRKRIP1Q9H875 184 aaPredicted RBP21.02■□□□□ 0.96
TOP3B-211ENST00000449704 MPRIPQ6WCQ1 1025 aa21.01■□□□□ 0.95
TOP3B-211ENST00000449704 KAT6BQ8WYB5 2073 aa21■□□□□ 0.95
TOP3B-211ENST00000449704 HSP90AB1P08238 724 aaKnown RBP21■□□□□ 0.95
TOP3B-211ENST00000449704 SHANK3Q9BYB0 1731 aa20.99■□□□□ 0.95
TOP3B-211ENST00000449704 SBF2Q86WG5 1849 aa20.99■□□□□ 0.95
TOP3B-211ENST00000449704 PKD1L3Q7Z443 1732 aa20.98■□□□□ 0.95
TOP3B-211ENST00000449704 PRKAR2BP31323 418 aa20.98■□□□□ 0.95
TOP3B-211ENST00000449704 TXNRD1Q16881 649 aa20.98■□□□□ 0.95
TOP3B-211ENST00000449704 MTHFSDQ2M296 383 aaKnown RBP20.98■□□□□ 0.95
TOP3B-211ENST00000449704 PROM2Q8N271 834 aa20.98■□□□□ 0.95
TOP3B-211ENST00000449704 DCAF5Q96JK2 942 aa20.98■□□□□ 0.95
TOP3B-211ENST00000449704 RSPH6AQ9H0K4 717 aa20.97■□□□□ 0.95
TOP3B-211ENST00000449704 NHSQ6T4R5 1651 aa20.96■□□□□ 0.95
TOP3B-211ENST00000449704 AKAP4Q5JQC9 854 aa20.96■□□□□ 0.95
TOP3B-211ENST00000449704 PIGBQ92521 554 aa20.96■□□□□ 0.95
TOP3B-211ENST00000449704 TMOD3Q9NYL9 352 aa20.96■□□□□ 0.95
TOP3B-211ENST00000449704 FCHSD2O94868 740 aa20.95■□□□□ 0.94
TOP3B-211ENST00000449704 NBPF14Q5TI25 921 aa20.95■□□□□ 0.94
TOP3B-211ENST00000449704 PSDA5PKW4 1024 aaPredicted RBP20.94■□□□□ 0.94
TOP3B-211ENST00000449704 ERVV-2B6SEH9 535 aa20.94■□□□□ 0.94
TOP3B-211ENST00000449704 PHACTR3Q96KR7 559 aa20.94■□□□□ 0.94
TOP3B-211ENST00000449704 SRCAPQ6ZRS2 3230 aa20.94■□□□□ 0.94
TOP3B-211ENST00000449704 CABP4P57796 275 aa20.93■□□□□ 0.94
TOP3B-211ENST00000449704 GAS2L2Q8NHY3 880 aa20.93■□□□□ 0.94
TOP3B-211ENST00000449704 DOT1LQ8TEK3 1739 aa20.92■□□□□ 0.94
TOP3B-211ENST00000449704 ANP32CO43423 234 aa20.92■□□□□ 0.94
TOP3B-211ENST00000449704 R3HDM1Q15032 1099 aaKnown RBP20.92■□□□□ 0.94
TOP3B-211ENST00000449704 KDM6AO15550 1401 aaPredicted RBP20.91■□□□□ 0.94
TOP3B-211ENST00000449704 KCNQ4P56696 695 aa20.91■□□□□ 0.94
TOP3B-211ENST00000449704 SMARCC1Q92922 1105 aaPredicted RBP20.91■□□□□ 0.94
TOP3B-211ENST00000449704 LGR6Q9HBX8 967 aa20.91■□□□□ 0.94
TOP3B-211ENST00000449704 NEFMP07197 916 aa20.9■□□□□ 0.94
TOP3B-211ENST00000449704 CCNL1Q9UK58 526 aaPredicted RBP20.9■□□□□ 0.94
TOP3B-211ENST00000449704 RNMTO43148 476 aaKnown RBP20.89■□□□□ 0.93
TOP3B-211ENST00000449704 SLC27A3Q5K4L6 730 aa20.89■□□□□ 0.93
TOP3B-211ENST00000449704 LRRC4BQ9NT99 713 aa20.89■□□□□ 0.93
TOP3B-211ENST00000449704 ASAP1Q9ULH1 1129 aa20.89■□□□□ 0.93
TOP3B-211ENST00000449704 BTAF1O14981 1849 aa20.89■□□□□ 0.93
TOP3B-211ENST00000449704 PALLDQ8WX93 1383 aa20.88■□□□□ 0.93
TOP3B-211ENST00000449704 NFATC2IPQ8NCF5 419 aa20.88■□□□□ 0.93
TOP3B-211ENST00000449704 ANO8Q9HCE9 1232 aaPredicted RBP20.88■□□□□ 0.93
TOP3B-211ENST00000449704 STK32BQ9NY57 414 aa20.88■□□□□ 0.93
TOP3B-211ENST00000449704 GNAT3A8MTJ3 354 aa20.87■□□□□ 0.93
TOP3B-211ENST00000449704 WDR43Q15061 677 aaKnown RBP eCLIP20.87■□□□□ 0.93
TOP3B-211ENST00000449704 PNNQ9H307 717 aaKnown RBP20.87■□□□□ 0.93
TOP3B-211ENST00000449704 MAP3K5Q99683 1374 aa20.86■□□□□ 0.93
TOP3B-211ENST00000449704 ATG3Q9NT62 314 aa20.86■□□□□ 0.93
TOP3B-211ENST00000449704 TOGARAM1Q9Y4F4 1720 aa20.86■□□□□ 0.93
TOP3B-211ENST00000449704 PLEKHF1Q96S99 279 aa20.84■□□□□ 0.93
TOP3B-211ENST00000449704 SLC52A2Q9HAB3 445 aa20.84■□□□□ 0.93
TOP3B-211ENST00000449704 RREB1Q92766 1687 aa20.83■□□□□ 0.93
TOP3B-211ENST00000449704 MAPK8IP3Q9UPT6 1336 aa20.83■□□□□ 0.93
TOP3B-211ENST00000449704 RGPD3A6NKT7 1758 aaPredicted RBP20.83■□□□□ 0.93
TOP3B-211ENST00000449704 RGPD4Q7Z3J3 1758 aa20.83■□□□□ 0.93
TOP3B-211ENST00000449704 SLC15A2Q16348 729 aa20.83■□□□□ 0.93
TOP3B-211ENST00000449704 IL17REQ8NFR9 667 aa20.83■□□□□ 0.93
TOP3B-211ENST00000449704 RTF1Q92541 710 aaKnown RBP20.83■□□□□ 0.93
TOP3B-211ENST00000449704 RBM42Q9BTD8 480 aaKnown RBP20.83■□□□□ 0.93
TOP3B-211ENST00000449704 LOC102724428A0A0B4J2F2 783 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms